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LotjaGi4g1v0062900.1

Overview

Field Value
Gene ID LotjaGi4g1v0062900
Transcript ID LotjaGi4g1v0062900.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase, putative; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|Q84KK4|I4OMT_LOTJA Isoflavone 4'-O-methyltransferase; TrEMBL-Plants: tr|I3RZV3|I3RZV3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0062900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:7796727..7799840) extracted from Lotus japonicus Gifu genome v1.2.

GAACCACGATATTTATTTATTTTCCACAAAATTGGGTATACAAATCAAATTTTGCCTGAAGCAAGATAGCTAACTGCAGC CAGCCAGCCAGCCAACTTCACCAAACCAAATCCACCAACTCCACACAACTCAGTCCACTGCAATGGCGTCTATGACTTAT TGACCATGGCCGCCTAAGGTCTCAACATTGCAGAACAAAGACAACAATTCAACAAACTTTATTTTGATTAATTCTTGTCT TTTACTCTTCACACTACTCATTGTTCTAAATTCCAAGCATATAAAACCAGCACACTAGTTCATTAACACATCACACCAAC ACTTACATTCCCAAACGCCACAAATCAACCGCCAGAAAACTTCACTTGCCAAAAAAAACAATGGATTTCAGCTCCAGCAA TGGCAGTGAAGACACTGAACTTTCCCAAGCTCAGATTCACCTCTACAAACACGTCTACAACTTCGTCAGCTCCATGGCTC TCAAATCCGCCATGGAACTAGGCATCGCCGACGTGATCCACAGCCATGGAAAACCCATCACCCTCCCTGAGTTAGCCACT GCCTTGAACCTCCGCCCTTCCAAAATCGGCGTCCTCCACCGCTTCCTCCGCCTGCTAACCCACAACGGTTTCTTCGCCAA AACCACCGTGTCCCGAGGTGAAGGAGCAGAGGAAGAAACAGCGTACGGTCTCACACCGCCATCGAAGCTTCTGGTGAAAA GCAACTCAACGTGTTTAGCTCCAATTGTGAAGGGAGCACTTCATCCAAGCTCGTTGGACATGTGGCGATCGTCGAAGAAA TGGTTCTTGGAGGACAATGAAGAACTGACTCTGTTTGAGAGCGCAACAGGGGAGAGCTTCTGGGAGTTTCTGAACAAGGA AACGGAGTCTGATACGCTGAGCATGTTTCAGGAGGCTATGGCGGCGGATTCTCACATGTTTAAGCTTGCTTTGAAGGAGT GTAAGCATGTGTTTGAGGGTTTGGGTTCTCTTGTTGATGTTGCAGGGGGAAGAGGGGGTGTTACCAAACTGATTCGTGAA GCGTTCCCTCATGTGAAGTGTACGGTTTTTGATCAGCCTCAGGTTGTGGCTAACTTGACTGGAGATGAGAATTTGAACTT TGTTGGTGGTGATATGTTCAAGTCTGTCCCTCCTGCAGATGCTGTTCTGTTGAAGGTATGTTCTTCTACCATTAATTTGA TTTTTGTTCATGGTTTCAACTTTCCTTGTTTTTCGGAATCAATTCTGACACTAAGAAACTACTCTCAGAAGTTTCTCTAC AGTAGAATTGATTTTGGCATCACAGAAAGATTTTCAAACATACATGCCCAACACTCTATCTAAGGGGCTGATTCTGGATG AAAATATTGATGTTTGAAAGTCATTTTTGAGGATTGATTGAAGAGCCAAAATCAATTTTAGTAAAAGCTAGCGATATTAT TTTATGCATTAAAAATAATCAATTGTGAGATATTACAACTAAAACGCTAGAATCAATTCAGTAAGAGTAAAATTAGTTGT GAACAAAAATATTGATGTTTGGAAGTTATGTTGAAAATGGATTTCGGACCCAAAATCAATTTTGGTGGAATTTAGAGAAA GTAGCTTCTGCGATGATCAATTGTAAGATTTTACAATTGAATTTCACAAAAAAATCACTTTTTTTTTATAAATGCATCAA ACATAAATCACTTCACATTCAACTAAGTTTTAGTGTAATCAATTTTTTATCAAAACCAAATTTACTGTTTAAAATCAATT GTGACAAACGCTCGTCCAAACACCACTTAAAAATGAGATTTGTAGCTTCTACTAATGATAATTGATTCTACAGTCTCCAA TGTGAAACCAAAGGTGGTATTTGTGAAGTTGCAAATTGTGTTCCAATTTGCTTAATTATTTGTTTTTGCAGTGGGTTCTG CATGACTGGAATGATGAGCTCTCCTTAAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGGGAGAGGGAAAGAAGGCAA AGTGATTATCATAGACATATCAATTGATGAAACAAGTGATGACAGAGAACTGACTGAGTTGAAATTGGACTATGACTTGG TCATGCTGACTATGTTCAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGAAGCTCATATATGATGCAGGCTTCAGCAGC TACAAGATTACACCCATATGTGGCTTCAAGTCTCTCATTGAAGTTTTTCCTTAATTAATTACAAGGTGTTGTGTGCTACA ATTTCAATAAGTTTCTAATTAAGACTCAAATCTGTAGTATATATTACTGCATATCAGGAATGAATTTTCCAAGCTTACTC TTTCCATAGAGGTCATTGTTATTTGTTCCCCACCGGAAAATTATTTGGTTTGGATCCCCTTTCGGTTTTCAAAGTAATTA AAAATAAGGTCATGTTAGTTTCTGAGAAACAGAGAGGTGCAAGTTAAATCTATTGAAAGCAGATTTGTTCGAGAGCATTG CAAAAGAAAGAAAAAAAAAATTATTGCACTTTTATTCTTTTATCTATCCTCATTTGTGATTTTGGTTCTTCTTCTTTAAA TCATTCCATAGGACAAAGTCTAACCAATCAATTTACGTTGAGTGTAACTCTGAGGTGCGCTTGTAATAATGGTGGTGATG CTAGTGGTGCCCCGTTCTTGGTGGTTGTTGACTTGTTGTTTCGTCCCAGAGTACCTGCGAAGGAACTCTAATGCCCATGA TGTACCGAGATTAGGTTAGATAGTGCACGTGTGCCTTAATCTATTCATATATCTTCATTTAGGAAGATGTTGGAGCGTTC CGAAATCAGTCAATGTCACTCAAATTGTTAGGTGTAGTGTGAGTCGAAGTGAGCCATTTGAATCTACATGTCAAATGCGC TTCCAATAGCAACATAATAATTTATCTATGGTATGCGATCTTTTCTACTTCTCTTTGAGTACAATGCTTGGGTCCTAGGG CAGTGAGGTGTTTTGACTTCAGGGAATCGGGCAGGAATAACATTGCAAGGAGTAATTTGAGTTGATATCGGAAGTAGTGG TTCTTTTTTAGGGTATGATCGAAATGTGTAAGTTAAATGATCGATTTACTGAATTATTCAGTCGAAACTTGGCG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0062900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATTTCAGCTCCAGCAATGGCAGTGAAGACACTGAACTTTCCCAAGCTCAGATTCACCTCTACAAACACGTCTACAA CTTCGTCAGCTCCATGGCTCTCAAATCCGCCATGGAACTAGGCATCGCCGACGTGATCCACAGCCATGGAAAACCCATCA CCCTCCCTGAGTTAGCCACTGCCTTGAACCTCCGCCCTTCCAAAATCGGCGTCCTCCACCGCTTCCTCCGCCTGCTAACC CACAACGGTTTCTTCGCCAAAACCACCGTGTCCCGAGGTGAAGGAGCAGAGGAAGAAACAGCGTACGGTCTCACACCGCC ATCGAAGCTTCTGGTGAAAAGCAACTCAACGTGTTTAGCTCCAATTGTGAAGGGAGCACTTCATCCAAGCTCGTTGGACA TGTGGCGATCGTCGAAGAAATGGTTCTTGGAGGACAATGAAGAACTGACTCTGTTTGAGAGCGCAACAGGGGAGAGCTTC TGGGAGTTTCTGAACAAGGAAACGGAGTCTGATACGCTGAGCATGTTTCAGGAGGCTATGGCGGCGGATTCTCACATGTT TAAGCTTGCTTTGAAGGAGTGTAAGCATGTGTTTGAGGGTTTGGGTTCTCTTGTTGATGTTGCAGGGGGAAGAGGGGGTG TTACCAAACTGATTCGTGAAGCGTTCCCTCATGTGAAGTGTACGGTTTTTGATCAGCCTCAGGTTGTGGCTAACTTGACT GGAGATGAGAATTTGAACTTTGTTGGTGGTGATATGTTCAAGTCTGTCCCTCCTGCAGATGCTGTTCTGTTGAAGTGGGT TCTGCATGACTGGAATGATGAGCTCTCCTTAAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGGGAGAGGGAAAGAAG GCAAAGTGATTATCATAGACATATCAATTGATGAAACAAGTGATGACAGAGAACTGACTGAGTTGAAATTGGACTATGAC TTGGTCATGCTGACTATGTTCAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGAAGCTCATATATGATGCAGGCTTCAG CAGCTACAAGATTACACCCATATGTGGCTTCAAGTCTCTCATTGAAGTTTTTCCTTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0062900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDFSSSNGSEDTELSQAQIHLYKHVYNFVSSMALKSAMELGIADVIHSHGKPITLPELATALNLRPSKIGVLHRFLRLLT HNGFFAKTTVSRGEGAEEETAYGLTPPSKLLVKSNSTCLAPIVKGALHPSSLDMWRSSKKWFLEDNEELTLFESATGESF WEFLNKETESDTLSMFQEAMAADSHMFKLALKECKHVFEGLGSLVDVAGGRGGVTKLIREAFPHVKCTVFDQPQVVANLT GDENLNFVGGDMFKSVPPADAVLLKWVLHDWNDELSLKILKNCKEAISGRGKEGKVIIIDISIDETSDDRELTELKLDYD LVMLTMFNGKEREKKEWEKLIYDAGFSSYKITPICGFKSLIEVFP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF005739
1 365 365 1.9E-121
IPR016461
Gene3D
G3DSA:1.10.10.10
3 111 109 4.5E-36
IPR036388
PANTHER
PTHR11746:SF228
4 365 362 1.7E-201 –
PANTHER
PTHR11746
4 365 362 1.7E-201 –
SUPERFAMILY
SSF46785
12 115 104 2.39E-29
IPR036390
ProSiteProfiles
PS51683
22 365 344 76.924
IPR016461
Pfam
PF08100
32 80 49 2.0E-17
IPR012967
Gene3D
G3DSA:3.40.50.150
113 365 253 2.6E-81 –
SUPERFAMILY
SSF53335
116 363 248 2.78E-49
IPR029063
Pfam
PF00891
135 347 213 9.6E-49
IPR001077

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0062900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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