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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0065000 |
| Transcript ID | LotjaGi4g1v0065000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SNI1; TAIR: AT4G18470.1 negative regulator of systemic acquired resistance (SNI1); Swiss-Prot: sp|Q9SWA6|SNI1_ARATH Negative regulator of systemic acquired resistance SNI1; TrEMBL-Plants: tr|A0A151TYJ1|A0A151TYJ1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0065000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8130932..8141311) extracted from Lotus japonicus Gifu genome v1.2.
GTGGAACCTTTTTATATCCCTAAACTCAAAATCCTCTGCTGCAAGAGTTGCAAAATTTTGGCGGGAAAAAGCAGTAGTAA CTCGGGATTTGTTCTGGTTAAAATGTCTAATTGTATATCCATCAAATCAAAATTCTCAGCATTTGACTAATTTCAATTCT GTTCTTGAAGAAAAAGAAAGAAGTGGGAGCGAGAATGGAAAACCCTAGCAGTGGTCAAAGATGGAACAGCGCAGGGGTAG AAGATAACATGCTAGCCATGTTTGATGCCTCAGAAGCTAAAGATGCTCATGAAGATGCCCTCGATGATCGTACGCATCAC ACTCCTTTTTCTAATGGGTTTCTATTATATGTTCTTCTTTTTCCATGTTCACTTGATTTTGAACTGTGTTTGTGTGCCCA TGTGGAAATTCATTGTGTTTAGGCTAATTGATCTTCTGGGTAATCAGAAAAATGTAAACTTTAGAGAATTTTGGTTCTGG GTTTGGGTTTTTTTCTCCTCAACATGAAAAAGTTGTTATCTTTTTTGCTTTCTTATGTTGATTACTATACACAGGGATTG CTTTTTTGGATGCTGTTCGAGCTTCTATTGCTCTTGGACATGGAAAGCCACCCACTAAGTAAGTCATTCTCTTTAACGCT GGTACGCGTCACAAAATGTTGAAAGAGTATCAATTTCTTCTGGGTTTGCAACAAGATTACATAAAAAACTGTTGTGCTTA ATTCCATTTTTCTGTTCTTTTTCTTTATCTGTAGTTTATTGTCCTCGAAGAGTAGGAACCCGTTTGAATACGGGCTTATT AGAGCTTATTAAAGCTTATCGGCTAGAAAATGCATGAAGTATCCTCTAATAAGTGCTATTTGGTTTGCGACCAAACCGGT GCTAGGTTGTATTTGGCAGAATGAGTTGTGTCTAGTGTCTTTTACCTGTATTCTGATTTCTGAGTATTTTTTTTAACTTG TCAAGAAAAATATTTGGGGCAGTCTTCCATACGTTGAGGACGGGGAAGACCATAGAGCTGATAATGGCGAGTTATAAGCT TCTGGTTGATTTAGAAAAGGTATTTGACTGCCAAATAACTTTTCTTTTGTTTTGATATTAATATGTCCTAAATGTAACTG ATAACTTCAAATGTGTTGAATTCTTTTTTGGGTTAGCACTTCCCTCGTGTGTATCTATCTGGCAGAGATAATTCCCAATC ACCCTCTAACTCGCCATCAAAGTTGGTTGTAGTTGAAAAGGTAAGAATGACTATTAGCCGTCTCAATCTGTTGCTTTTGT TCTATTTTGGTTAAATTTAGTTGGTCATGATAGGACATTGTTGGGTGATTTCATCAATGTTTCTGACCTTACTAAGTGGT AAAAGGCTTCTATTGTTATTGATTTTGGATAAATTTGACTGGTTATTGGGATGCTAATAGAGATTACTATTTACTTACAA ATAGACAATATTTTTTCTGGCAGGCATGGTATCCCATTATTGGCCTTGATAATGCAACTGCTGTCACTGAAGCAGGTAAC AAACAGTCCGGTGGACCTCTTGATCCCTCTGTGAGTTTGTTTTCCTAGAACTCAATTTTGTCCTTTAATGTTTTTAGTTC TTTCATTTTACTTACAACATTTTTTTCCGTAATGTTCAGTTTTTCCTATCCTCAGTAGAGCCAAAAAATAGGGTTTTTTC GCATTTCAAAATATGGTACAGAAATTATGGGTTATTTTTTATTTCTTGTCATGTTAATGTTGCCTTCCTAGTTCCTTTTA AGTTTTACCCCAACATTTATGAAAATCTGCTTTTGGATCTACTTGTTTTATTGTGTTGCACAATATTCGGTAGTAGACAC ATTCAGTTGCAGTCAGGTTATGACTAATAAGAGCTCTGCAGCTCAATCAACTCATTTATATTTTTAAAATATATATCTTT TTTATTATAATATTGGTCTTCTGCAAGATTGTATAATGTATCTTTCTACAAATTGCAATTTGATGTTCAATTCTTAACAC TCATTTTTGGTCTTTATTTTCTCCACCTACCTTAGAGCTTTCAACTCATGATTGAAGATCTCGCTGAAGTTTTAACTGAG GACGAATTTCAAACATCAAGTGTGAAGGTTAGTTCATTAATATTGCACATTTCTGTTGCGATATCTGTTAGGATATAGTT TGTTGAGATAATTTTGTTATGATAATTTGTTTGGATTAGATCATTATATACTGTTATGACTTATGATTCTGTTATGATAT ATTATGATAAGATATATTGTTAGTAAGTATAACATATATTATGTTATGATAGATTAGAAATTTTTTTATAAGCCTAAAAT ATGTACAAGGGGTATCCTAACCCGTATACAAAACTAACCTGTTAAACACATTAAAGGGTGCCTATATCAATCAACCAAAG TAAAATTATAACCTTTAAGTTTACACCTAAGCCAAGACCAAGCTAAAGCCTTAACTTTTTTTCAGAATAGATGCAATACA TGAGTTACCATTGTGAAAGATAATATCATTGTGACAACTCCAAATGGACCAAATGATAGCAAACCATTCTGTCAACACCA TCTTTGGGAGCTTACCGTATAGGATCCCTACAAATTGTGAAAAATTAGCCCTGCATTCAGCTTGGAGTGCTGTGTAAAGT CCAAGCCAATTAAGAAATTGCTGCCAAATAGAATGTGAAACTGAACAAGAGAACAACACATGAGAACATTGATTCATGGC CATAATTACATAAATGACATGAAGTATTATTATTCTCCAAAGTAACCTTTCTAGGCAACAAATTATCTCTTGTCTGCAAC CTTTCAAGATAGGCTTTCCAGCCAAATGCTGAAACTTTTGATGGTACAACATTTGACCAAATAAGCTTAAGAAACAATCT ATCCACCCTTCGAAAAGCCTGATGCAAAATCTCATAAGCTGAACGCACTGAAAACCCCACGTAAACATCAGCTTTCTAGC ACAGTATCATTAACTTCATGTTTGGGCATACTTTTTTGATAACCTGCAACTAAATGTCAAAGAATGGTCTTTCCCATTCA AATGATTTCTTTCTCCAAATCATATCCCACCTAGAAACACTATTTTCTTTCCCGTCTCGCTCACCTTACAAACTGAGAAA TTTTTACACAAATCCTCCCCAACCCGCAGATCCAATTAAAACCGTGTCCTGCCAACATTAGGATATGATATGATTTTATT GCTCAGGTTTCATTCTTTTAGCCTTTGTAATTGACGAGGCAGCCTCTAGAAACCCAGTTCTATAAATATATACTTCTGGA TCACATTAATATCAATCAAATATTCAATTAATTATTAAATCAGCTATTCAGAGTTCTTCGAGTTTCAAGAATTCAATTCT AGAACTCTGTATATTTCATTATTTCTTCTGCATTAGCCGTTGAGAGTTGAGACAGACTCCTTATAATTTTGTATTGGATA TGAAAAAAGTGTTGCAGCTGAGGCTACAAAATGTGGTCTAATGACAAATTAAGTACAGTGTTTATTTAACAAATATAAGA TACATATTTCTGATTTTGTTTATGTAATCTTGATGCAGACCCTGCAGAAATGGTTACTCTTCCAATATCTTGTGATTGTT TTCCAAGGCGATTTTCTCTCTCGTAATGGTATGTATGAAGTTGAACACATTCTCTTCAGCTGCTATGCCTTAGTCTACTT GTAAATTCTAAGTAACTGTTCTGTTGCAGCAACCATGGACTGGAGTATGCAGAGGGAATCTTTGCTCCACAAGTTACTGG TAATTGTTTCATTATAGGATTTTGTTGACTAACCAATCAACAATTAGCCATTATGATTTGTTGAGATTTTATGCATCTTA ATGCACCGCCTAGAAGTTTTTATTTTTTATTTTTGTAGAAATATTTAACTGATCGAGTTTTTGCAGGGATCTAGGAAAAT AAATTACAAAAACTTGATGAAAGACTGTCTGAAAGTTATTTGTCAACTATGTCAACTTCTTCAAAAAGAACTCGGTGAAC ATCTAGAGCTTCAAAGGAGTTCTGAATCTCAGTTATCCAAAAATTGTGTTACTGCATTATCTCTTGCCTTACATGAAGTA TTAAAGAACACATGTATCTCTATGGACAAACTTTTGGTGATGGTATGTTTCTGAACTTTAATTGTTATAGTAATTATGTA ATTATTCAAATTTCAAATAACTTTCTGTGTCTGCTTACATTGTTGATTATTTTAGATCATGGACCTTGATATGTCTAGGA AGAAAGCAGATATTGAAGGTCGTACTTCAAGAGCTGATAGTCCAAGGTAATTGTTTGTTTTAATTTTGTTTCATTGTTGT TCCTTTCAGATGGTTTTCTTGTTTCTCTATGTGCTGTGGTTCTGGTTGAAATAGATGTAATCTTGTATTGGTGCATTTGG TACAGAACACCTTTGATCGACATAATTCTGGATGAACTAGCTTACAGCAAAGATACTGTTCCCCTTTTCCTCGAGGTGGC TCCTGAATACTGTCTCTGCCCTTTCCCTCTCTATTCATCTCACCATCTCTCTTTGCATGTTACTATCTATGGGGCTAGAT GAAGTATGGATGCATAAGATTGGGTTATGCTTGTCCTTTGAAAACCTTTGCTCTGACGTATCCTGATTGGATGTGATTCG AGACATCTTACTTTGGTGTTACTAGTTAACTTTTCTAAATTTCAATATCAAGTCATATTTTGAGGGAGTTATCTTGTGGC TAATAATTACTTATGCTTTTCATGAGAGTGGCTTCAGATCTTCAGTGAACCTAAATGGAAGCTGGAAATAATTGTACAGT ATCTCTGGAGATACATAACCAAGGTAGTTAACAGCCACACTATTTAAAAATCTATCATACTTGATTAACACTATATTCAA ATCAAAATCCATCATACTGTTTCATAATCTCTTGAATTAACTACTTTTGTTAATACAAAATTGCAGCCTTCTGTTCGCAC TCGTAGGACAAACAATTGTACTGAAGATGCAACATTTGATGAGGCTTTGAAGTGCTTTTCAAATAAAACAGGCACTAAGA GCACAATAAAAAAAATTGGTGCAGATGTAATTCAGTTACTTCTAGCTCATGGTTTTCAGGTACCTGTCTTTGTTAAATGA AACAATGCCACATATACATTGATTTGAATGAGATAGCTTCTTCAATAAAGAGCTACAAAGATTGAGGACCAGTAACCCTC GTAAAGAAGAAATGAAGACATCCAAGAAATAAGAACATCATAACGAAAGTTGAAGAAACTCTTTTGCATAATAGGACCCG TTTGGATGCAGATTAAAAGACCTTTATTGGAGATAAGCTTCAATACGTGTTCTTTGATTTGTATCCAAATAGGCTCATTG TCAAAGAACTTCATTAATCCCAAACAATGGATCACGACCACTTCGATAGCTATTGATCTCATGGGATTGGGGGACTAGAT AGAGATTTTTGCTATTTGGATTTTTTTCAGTATGAAGCCTGTCATGTTTGCCCTAGGGAAGCAAAAGATATTAGTCCACA CTTCTTGAAAACTGTATGAGGAGCTTCAAAAATTAGTTCTTTTTTTGAAATGGGTTTTCACTGGTTTTCAGGCTCAGTTG TTGATATTGTCAGAAAGAAATGAAGATGGCAACATATCTGAGGACAAAGAAGAGGGAGCCAAAACTGTTGTGCATTTCTG CCAGACATTAATTTCTGCTTTTGAGAGTTTGATAAGCACAGATGAGTAAGTGAACTATTTCTCAGGATTTTAATCTTTTG CAGTGATTTCTAAATATGAAACCATGTTATAAAAATCCATAATTTTCTTGGTTAATCTTGGCAATTCTGAAATTTGTTTC CTGTCATGGTGTAGGCATGCGGAGATCCTGTCGATTGGAAAAGAGGCGCTATTTACTGCTGCAACTATTATCTCCATGAA GTCATAGGAGCCTAAGTAACTGCTTTGAATTGATTAACGTATTCTGTGATTCTGTCTGATACAACAAGATCAACCAACTC TATTCTATATTGACTTGATTAACTCATTCTTTTTGCATAGTTGTAGGCTTTATGTTAATTAAATGCAATGGGATATACCG ATATAGTACATTGTTAGGGAGTTCAATTGCCTTGATAAGATCCTTGTCATATGAGATCTTAATTCTTACAAGACGTGGGT GAGAGTTGTGAAGTGTTTCCCTTATGGAGGACCATACTCGATTTAAGATTATCCTAATCATGGAGTGGAATGTTAATAGA TGCAATAAATTAGGACACCATAGCTAGAAGTGTCCAACTCATAGAAGGGACAATAACAATAACCAAGAAGGAATTTCCAA GTGTCAAAGTGGTGGGTGCTAGCATATCTCTGAACAAGGAATACAAGCAATGTTCACTTGGTCACCCTCTTTTTGATTGA TTAAAATGCATGAGTCTCGTCAAATTGGTTGTGGGGCCATATAATTTATTAGGCCCTGTGTGAATTTTAACTAATTGAAG AGGGTTAGAAAGAAAGTTGATGTGAGTTTTTTTTTTTACATAAGAAATATAATTTGCACCCGTCAGAGTTTGATTCCTAG ACCTTCCCCACCTAACCCATATGCTCCCTAACTCTTACCAATGAGATTATTTGGCAGCTAGGGAGACAGGAATCGCCCAT GCACACTACAATCTCTTCTTTTATTTTTCACCCCTGCACGCTACAATCTCTTCTTTTCTCCCCGTGTTTCCTCCCTCTCA CCACTTTAATCGAACTCAATTTATCCATAGCCGCCACAAAAGCCTGAAAAAACCGCTGCTTATCCTTCGCAAGATCCACA ACCATCGCCTTCGTTCGTGGATCCAAAGCCAAACCTTGATCTGAACCCAACAAACCCATCTTCTTCTGCAAGTTACTGTA ATACGCATGATCAAACACGAAAGGTGTAGTAGCATCGAACGGGGCAACGATGTCGGAGTTTCCACCGGAGTTCGGACAAT ACAGTCGCAGAGCGTGAACCAACTTCGGATCCATGTCCGGGTCGGGTTGATCCGTGCCCTTGAAATTGTAGAGTCGGGTC ACGAAGTGGTTGCAGTGGGCGAACCCGATTGTGTGGGCGCCGGAGAGAGTGACCATGTCTTGTGTGGCTAGGCCTTTGGA GTTGAAGAGCTTGATGAGTTGATCAACGGTGAAGTTTGCACGTGGGATGTTGGGGGCCACTCGTGATGCCTTTGAGATCT TTCCATCCCATCTTCCTTTTTTCACTTGGTAATAGGGTCCTCCTGCCTGTGCCACATTTAAACTAAATAAAATCATCATG AAAACCCAACATCAAATCTAATGGAATTAAGTCTTTTTCTTCCTAAGGTATTCCATGGCCGACAAACTAATCATTCAAGG TTCAGAGATCATGTTAAGTGGGTAGACATCTCCCAACAAATTCTTAACTAAATGCTTAAAAACTCAAGTATCTATAGTTG TGCTACACCTTGCTTAATTAAGTCATTTCTCTTACAAGTACAAGGCTCCTACTACATATATCAGCTTGATATGATATGGA ATAGCAAAGTTGGTCAATTTAGCATCTGAATGAATTTTTCGCTGCAAACTTAGTCCATAGAAAAAGAAAATACATGTTTT TAAATGTATAAAATGTTAGTCAAATTAGTATTTATACATTCAAGATTTTTGAATGTATTTTCCAGACAACTAACTTAGCA GTGGCAAAATCTTTCAGAATTCACTCAAAGGACAATATACTAAAAATATTAGAGCTAAGGCTCAGAAGCAGCCTTGTGTT TGGTGCCCAAATAATTTACCTGTAAAAGTGCAAAAGTTCAGCTATTCTAGAGTCTAACATACCAAAATATATGACAAGAA GAAAACAATTCTAAACAGACTTTATGTATGCAGAGTCCTTGAATGGAACAGCCACTCTGCAAACTGCCAAAATTGCAATC AATATTATAGTAGTTGAGAAATTTTCATTTCTTAATTGGAGTTGTCTAACTTCAAGTATTAATAACTTTATTATAAGTGG ATTAGTTAGTGGTGCTAAAGATAAAATGGTTAAGAACATGGTGTTATATTGTCCTTTCCCCCCTTTCTCTTAACATTTAA AAACCTATTACAAAAACTAACATCTCATTTCTTTAAATATAAAGTACATAATAATGTCATCAGAAATGACAGACAAGTAG GCTGCAATGAATAATATAAGTACCATAATACTGCGCCTAAATTTTTTAGAATAGCTTGTTATTTTGGCATTGATATCATC ATCAAATTTCCCTGGTATTCTATAAAAGGGGAAACGGGAAACCACCTTTGTCTTTCCAAAACCGTTTTTCTTCTGGGTTA GCACTTAGCAGTATGGAAGCAAAGCTGCTGAAAAAAAAGGAAGAAAATTTGAACTTACACGTCATGTTTGAAAACTCGTT CAAGAAACCACAGTAAAACCAAAATCACAGTAAACAAAAGTTCCAGCTAAGGAAATTTACTTGTGTCTACCATAATTTTA GCTTAACCATAGTTTTTGATTGAGTTTCAAGACAGGCACTCAGAATAGAACTAGAAAAGCATAATATACATTGCTTCATA GTCAAATAGCCCCTCTCCTCTAAGGCCAAAGTAAGAGGAACAAATATTGTTACTTCTAAGAGCAAAACCATTTAAAACTG TGATCAGGTACCTATAATATATCAAATCTTAGCACGTGAGGGCATTACCAAAGTGCCCACATTTTAACCAGAAAGTAGGG GTGGAATAAAGAGAAACAAATAAAGATATTAAATAGGAACTGAAACAAAAAACCAGTAACTTACCAGGTGAACATAATCT CTGGCTGCAATTGCAAGAATGTCTGCACAAGACACAATGCCAGGGCACTTTTTCTCCACTATTTCCTTGGCCTTCCTCAC AGTCTCAAAGCCTTCCACCCTCAAATCTTTGTTATCCTCTGCATCTTTCTCAGCCAATTCCTTGCTTCCAGGCTTTGATG CTATTAAAATTGAAGCATCACATCCCTGCACTCACCCATTCAAGAATTATCTTATCACAAACCCCCCCATTAAAAAATGT TCCAAGAACAAAAATTCACAACCAAACACAAATGACTAATTTAACAGCATCTTTGGATTCACATTCAGATCTTCTACAGT CAATTCTGCTCCCACAAAAGCTACTAGAAGTAGCTTTTCTCATAATCAATTTGCATTCCAACGTGAAAATCTACCGTGTA TCCGAACATGCACTAAATGCAGCTGGAATTACTGAAACATTTGTTCTAAAAGTATTACTGGTGGATGAAGACTAGAAATT ATAGGAATTATCTTATCACAAGTCCCCCAGGAATCTAAAGTCACAACCAAACACGAATGACTAGTTTAACTGCATGTTCA AAAATTCTTCTACAAATTCCAAAACCAGGATCAACTCTGGGGAGAAGGTTCAGTGAGTAATTTTGAGTTTTAGAATTGTT TCTGAGGAAACAGAAGTTTATCAAAACATGCTATGAAGACCATAAATTGGCTTGCTTTTTGCTTTTAAATCTTTGAGAAT AATCAGGAAAACAAGCCAGTACATGCATGCAAGGGTAAAGTTTTTTTTAGTGGAATTGGACTTACTTCTACAAAGCAATC ATGGAAGAGAAGACGAATGGTGGCAGGTCCAGAAACAGGTGATTCTTTGAATTGCTGAGAGGTGACTGAGCCAACAAGCT GCTCTAACTGGGGGCAAGATTTTGCATAGTAATCAACTGAAAGAATGGCTAAGCATGATGAAGTTCTGAAGAAAACAGAC AAAGAAATGAGTAGAACTGAAAAAGAAGTTGAAGCAAAACAAAGGACAGACATGAGTAGTTTAGTTAATGGAGCAGTTCA GGACAAAACAAAAGAGTAAATGTTGAAGAAGGCAAGGTTGAAAATTTGTAGTATGGGACAGATTGCTAATCAGAAACAAG GGAGAGTTAAAAATTAGAGGGAATCAAACCCGTGAATCTTATAGAATAGAAAAATGAAGCTGAATTATTAGGTGGTGTCT AGTGCAGAAAAAGTTCAGACATCCCAAAAATAGAATTCACTAAATTCCAGAGGAAATCACATTGAAAATTGTATATATAT TTGGTTTAATCCTAATTGGTTTATGTTTGGTCAAATGAAAATGTAGGGTCTACATAGATGCATCATGTCAGTTTGATAAT TTGAGCTTCCTCGAGATTGGAAGAATCAGTGACAGATGATCAAAGAGAGAAACTGTGGTTTATTTATCAATTTATGGCTG ATTATTTTAAAATAGTAAAACTGGAAAATGTTAAAGAACATGGGCATGAACCAGAACTACCCTTATTATGAAAAATGATG ATGAGATTCATTCACATGTGTGCAATTGTTCCTGATTTTGAAGAGAAAGTTGACTGCTGG
CDS sequence (LotjaGi4g1v0065000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACCCTAGCAGTGGTCAAAGATGGAACAGCGCAGGGGTAGAAGATAACATGCTAGCCATGTTTGATGCCTCAGA AGCTAAAGATGCTCATGAAGATGCCCTCGATGATCGGATTGCTTTTTTGGATGCTGTTCGAGCTTCTATTGCTCTTGGAC ATGGAAAGCCACCCACTAAAAAAATATTTGGGGCAGTCTTCCATACGTTGAGGACGGGGAAGACCATAGAGCTGATAATG GCGAGTTATAAGCTTCTGGTTGATTTAGAAAAGCACTTCCCTCGTGTGTATCTATCTGGCAGAGATAATTCCCAATCACC CTCTAACTCGCCATCAAAGTTGGTTGTAGTTGAAAAGGCATGGTATCCCATTATTGGCCTTGATAATGCAACTGCTGTCA CTGAAGCAGGTAACAAACAGTCCGGTGGACCTCTTGATCCCTCTAGCTTTCAACTCATGATTGAAGATCTCGCTGAAGTT TTAACTGAGGACGAATTTCAAACATCAAGTGTGAAGACCCTGCAGAAATGGTTACTCTTCCAATATCTTGTGATTGTTTT CCAAGGCGATTTTCTCTCTCGTAATGCAACCATGGACTGGAGTATGCAGAGGGAATCTTTGCTCCACAAGTTACTGGGAT CTAGGAAAATAAATTACAAAAACTTGATGAAAGACTGTCTGAAAGTTATTTGTCAACTATGTCAACTTCTTCAAAAAGAA CTCGGTGAACATCTAGAGCTTCAAAGGAGTTCTGAATCTCAGTTATCCAAAAATTGTGTTACTGCATTATCTCTTGCCTT ACATGAAGTATTAAAGAACACATGTATCTCTATGGACAAACTTTTGGTGATGATCATGGACCTTGATATGTCTAGGAAGA AAGCAGATATTGAAGGTCGTACTTCAAGAGCTGATAGTCCAAGAACACCTTTGATCGACATAATTCTGGATGAACTAGCT TACAGCAAAGATACTGTTCCCCTTTTCCTCGAGATCTTCAGTGAACCTAAATGGAAGCTGGAAATAATTGTACAGTATCT CTGGAGATACATAACCAAGCCTTCTGTTCGCACTCGTAGGACAAACAATTGTACTGAAGATGCAACATTTGATGAGGCTT TGAAGTGCTTTTCAAATAAAACAGGCACTAAGAGCACAATAAAAAAAATTGGTGCAGATGTAATTCAGTTACTTCTAGCT CATGGTTTTCAGGCTCAGTTGTTGATATTGTCAGAAAGAAATGAAGATGGCAACATATCTGAGGACAAAGAAGAGGGAGC CAAAACTGTTGTGCATTTCTGCCAGACATTAATTTCTGCTTTTGAGAGTTTGATAAGCACAGATGAGCATGCGGAGATCC TGTCGATTGGAAAAGAGGCGCTATTTACTGCTGCAACTATTATCTCCATGAAGTCATAG
Protein sequence (LotjaGi4g1v0065000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENPSSGQRWNSAGVEDNMLAMFDASEAKDAHEDALDDRIAFLDAVRASIALGHGKPPTKKIFGAVFHTLRTGKTIELIM ASYKLLVDLEKHFPRVYLSGRDNSQSPSNSPSKLVVVEKAWYPIIGLDNATAVTEAGNKQSGGPLDPSSFQLMIEDLAEV LTEDEFQTSSVKTLQKWLLFQYLVIVFQGDFLSRNATMDWSMQRESLLHKLLGSRKINYKNLMKDCLKVICQLCQLLQKE LGEHLELQRSSESQLSKNCVTALSLALHEVLKNTCISMDKLLVMIMDLDMSRKKADIEGRTSRADSPRTPLIDIILDELA YSKDTVPLFLEIFSEPKWKLEIIVQYLWRYITKPSVRTRRTNNCTEDATFDEALKCFSNKTGTKSTIKKIGADVIQLLLA HGFQAQLLILSERNEDGNISEDKEEGAKTVVHFCQTLISAFESLISTDEHAEILSIGKEALFTAATIISMKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 471 | 471 | 9.4E-182 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. | ||
| Cellular component | Smc5-Smc6 complex | A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans. | ||
| Biological process | Negative regulation of defense response | Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response. | ||
| Biological process | Negative regulation of transcription, DNA-templated | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0065000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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