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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0065000 |
| Transcript ID | LotjaGi4g1v0065000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SNI1; TAIR: AT4G18470.1 negative regulator of systemic acquired resistance (SNI1); Swiss-Prot: sp|Q9SWA6|SNI1_ARATH Negative regulator of systemic acquired resistance SNI1; TrEMBL-Plants: tr|A0A151TYJ1|A0A151TYJ1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0065000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8130934..8140229) extracted from Lotus japonicus Gifu genome v1.2.
GGAACCTTTTTATATCCCTAAACTCAAAATCCTCTGCTGCAAGAGTTGCAAAATTTTGGCGGGAAAAAGCAGTAGTAACT CGGGATTTGTTCTGGTTAAAATGTCTAATTGTATATCCATCAAATCAAAATTCTCAGCATTTGACTAATTTCAATTCTGT TCTTGAAGAAAAAGAAAGAAGTGGGAGCGAGAATGGAAAACCCTAGCAGTGGTCAAAGATGGAACAGCGCAGGGGTAGAA GATAACATGCTAGCCATGTTTGATGCCTCAGAAGCTAAAGATGCTCATGAAGATGCCCTCGATGATCGTACGCATCACAC TCCTTTTTCTAATGGGTTTCTATTATATGTTCTTCTTTTTCCATGTTCACTTGATTTTGAACTGTGTTTGTGTGCCCATG TGGAAATTCATTGTGTTTAGGCTAATTGATCTTCTGGGTAATCAGAAAAATGTAAACTTTAGAGAATTTTGGTTCTGGGT TTGGGTTTTTTTCTCCTCAACATGAAAAAGTTGTTATCTTTTTTGCTTTCTTATGTTGATTACTATACACAGGGATTGCT TTTTTGGATGCTGTTCGAGCTTCTATTGCTCTTGGACATGGAAAGCCACCCACTAAGTAAGTCATTCTCTTTAACGCTGG TACGCGTCACAAAATGTTGAAAGAGTATCAATTTCTTCTGGGTTTGCAACAAGATTACATAAAAAACTGTTGTGCTTAAT TCCATTTTTCTGTTCTTTTTCTTTATCTGTAGTTTATTGTCCTCGAAGAGTAGGAACCCGTTTGAATACGGGCTTATTAG AGCTTATTAAAGCTTATCGGCTAGAAAATGCATGAAGTATCCTCTAATAAGTGCTATTTGGTTTGCGACCAAACCGGTGC TAGGTTGTATTTGGCAGAATGAGTTGTGTCTAGTGTCTTTTACCTGTATTCTGATTTCTGAGTATTTTTTTTAACTTGTC AAGAAAAATATTTGGGGCAGTCTTCCATACGTTGAGGACGGGGAAGACCATAGAGCTGATAATGGCGAGTTATAAGCTTC TGGTTGATTTAGAAAAGGTATTTGACTGCCAAATAACTTTTCTTTTGTTTTGATATTAATATGTCCTAAATGTAACTGAT AACTTCAAATGTGTTGAATTCTTTTTTGGGTTAGCACTTCCCTCGTGTGTATCTATCTGGCAGAGATAATTCCCAATCAC CCTCTAACTCGCCATCAAAGTTGGTTGTAGTTGAAAAGGTAAGAATGACTATTAGCCGTCTCAATCTGTTGCTTTTGTTC TATTTTGGTTAAATTTAGTTGGTCATGATAGGACATTGTTGGGTGATTTCATCAATGTTTCTGACCTTACTAAGTGGTAA AAGGCTTCTATTGTTATTGATTTTGGATAAATTTGACTGGTTATTGGGATGCTAATAGAGATTACTATTTACTTACAAAT AGACAATATTTTTTCTGGCAGGCATGGTATCCCATTATTGGCCTTGATAATGCAACTGCTGTCACTGAAGCAGGTAACAA ACAGTCCGGTGGACCTCTTGATCCCTCTGTGAGTTTGTTTTCCTAGAACTCAATTTTGTCCTTTAATGTTTTTAGTTCTT TCATTTTACTTACAACATTTTTTTCCGTAATGTTCAGTTTTTCCTATCCTCAGTAGAGCCAAAAAATAGGGTTTTTTCGC ATTTCAAAATATGGTACAGAAATTATGGGTTATTTTTTATTTCTTGTCATGTTAATGTTGCCTTCCTAGTTCCTTTTAAG TTTTACCCCAACATTTATGAAAATCTGCTTTTGGATCTACTTGTTTTATTGTGTTGCACAATATTCGGTAGTAGACACAT TCAGTTGCAGTCAGGTTATGACTAATAAGAGCTCTGCAGCTCAATCAACTCATTTATATTTTTAAAATATATATCTTTTT TATTATAATATTGGTCTTCTGCAAGATTGTATAATGTATCTTTCTACAAATTGCAATTTGATGTTCAATTCTTAACACTC ATTTTTGGTCTTTATTTTCTCCACCTACCTTAGAGCTTTCAACTCATGATTGAAGATCTCGCTGAAGTTTTAACTGAGGA CGAATTTCAAACATCAAGTGTGAAGGTTAGTTCATTAATATTGCACATTTCTGTTGCGATATCTGTTAGGATATAGTTTG TTGAGATAATTTTGTTATGATAATTTGTTTGGATTAGATCATTATATACTGTTATGACTTATGATTCTGTTATGATATAT TATGATAAGATATATTGTTAGTAAGTATAACATATATTATGTTATGATAGATTAGAAATTTTTTTATAAGCCTAAAATAT GTACAAGGGGTATCCTAACCCGTATACAAAACTAACCTGTTAAACACATTAAAGGGTGCCTATATCAATCAACCAAAGTA AAATTATAACCTTTAAGTTTACACCTAAGCCAAGACCAAGCTAAAGCCTTAACTTTTTTTCAGAATAGATGCAATACATG AGTTACCATTGTGAAAGATAATATCATTGTGACAACTCCAAATGGACCAAATGATAGCAAACCATTCTGTCAACACCATC TTTGGGAGCTTACCGTATAGGATCCCTACAAATTGTGAAAAATTAGCCCTGCATTCAGCTTGGAGTGCTGTGTAAAGTCC AAGCCAATTAAGAAATTGCTGCCAAATAGAATGTGAAACTGAACAAGAGAACAACACATGAGAACATTGATTCATGGCCA TAATTACATAAATGACATGAAGTATTATTATTCTCCAAAGTAACCTTTCTAGGCAACAAATTATCTCTTGTCTGCAACCT TTCAAGATAGGCTTTCCAGCCAAATGCTGAAACTTTTGATGGTACAACATTTGACCAAATAAGCTTAAGAAACAATCTAT CCACCCTTCGAAAAGCCTGATGCAAAATCTCATAAGCTGAACGCACTGAAAACCCCACGTAAACATCAGCTTTCTAGCAC AGTATCATTAACTTCATGTTTGGGCATACTTTTTTGATAACCTGCAACTAAATGTCAAAGAATGGTCTTTCCCATTCAAA TGATTTCTTTCTCCAAATCATATCCCACCTAGAAACACTATTTTCTTTCCCGTCTCGCTCACCTTACAAACTGAGAAATT TTTACACAAATCCTCCCCAACCCGCAGATCCAATTAAAACCGTGTCCTGCCAACATTAGGATATGATATGATTTTATTGC TCAGGTTTCATTCTTTTAGCCTTTGTAATTGACGAGGCAGCCTCTAGAAACCCAGTTCTATAAATATATACTTCTGGATC ACATTAATATCAATCAAATATTCAATTAATTATTAAATCAGCTATTCAGAGTTCTTCGAGTTTCAAGAATTCAATTCTAG AACTCTGTATATTTCATTATTTCTTCTGCATTAGCCGTTGAGAGTTGAGACAGACTCCTTATAATTTTGTATTGGATATG AAAAAAGTGTTGCAGCTGAGGCTACAAAATGTGGTCTAATGACAAATTAAGTACAGTGTTTATTTAACAAATATAAGATA CATATTTCTGATTTTGTTTATGTAATCTTGATGCAGACCCTGCAGAAATGGTTACTCTTCCAATATCTTGTGATTGTTTT CCAAGGCGATTTTCTCTCTCGTAATGGTATGTATGAAGTTGAACACATTCTCTTCAGCTGCTATGCCTTAGTCTACTTGT AAATTCTAAGTAACTGTTCTGTTGCAGCAACCATGGACTGGAGTATGCAGAGGGAATCTTTGCTCCACAAGTTACTGGTA ATTGTTTCATTATAGGATTTTGTTGACTAACCAATCAACAATTAGCCATTATGATTTGTTGAGATTTTATGCATCTTAAT GCACCGCCTAGAAGTTTTTATTTTTTATTTTTGTAGAAATATTTAACTGATCGAGTTTTTGCAGGGATCTAGGAAAATAA ATTACAAAAACTTGATGAAAGACTGTCTGAAAGTTATTTGTCAACTATGTCAACTTCTTCAAAAAGAACTCGGTGAACAT CTAGAGCTTCAAAGGAGTTCTGAATCTCAGTTATCCAAAAATTGTGTTACTGCATTATCTCTTGCCTTACATGAAGTATT AAAGAACACATGTATCTCTATGGACAAACTTTTGGTGATGGTATGTTTCTGAACTTTAATTGTTATAGTAATTATGTAAT TATTCAAATTTCAAATAACTTTCTGTGTCTGCTTACATTGTTGATTATTTTAGATCATGGACCTTGATATGTCTAGGAAG AAAGCAGATATTGAAGGTCGTACTTCAAGAGCTGATAGTCCAAGGTAATTGTTTGTTTTAATTTTGTTTCATTGTTGTTC CTTTCAGATGGTTTTCTTGTTTCTCTATGTGCTGTGGTTCTGGTTGAAATAGATGTAATCTTGTATTGGTGCATTTGGTA CAGAACACCTTTGATCGACATAATTCTGGATGAACTAGCTTACAGCAAAGATACTGTTCCCCTTTTCCTCGAGGTGGCTC CTGAATACTGTCTCTGCCCTTTCCCTCTCTATTCATCTCACCATCTCTCTTTGCATGTTACTATCTATGGGGCTAGATGA AGTATGGATGCATAAGATTGGGTTATGCTTGTCCTTTGAAAACCTTTGCTCTGACGTATCCTGATTGGATGTGATTCGAG ACATCTTACTTTGGTGTTACTAGTTAACTTTTCTAAATTTCAATATCAAGTCATATTTTGAGGGAGTTATCTTGTGGCTA ATAATTACTTATGCTTTTCATGAGAGTGGCTTCAGATCTTCAGTGAACCTAAATGGAAGCTGGAAATAATTGTACAGTAT CTCTGGAGATACATAACCAAGGTAGTTAACAGCCACACTATTTAAAAATCTATCATACTTGATTAACACTATATTCAAAT CAAAATCCATCATACTGTTTCATAATCTCTTGAATTAACTACTTTTGTTAATACAAAATTGCAGCCTTCTGTTCGCACTC GTAGGACAAACAATTGTACTGAAGATGCAACATTTGATGAGGCTTTGAAGTGCTTTTCAAATAAAACAGGCACTAAGAGC ACAATAAAAAAAATTGGTGCAGATGTAATTCAGTTACTTCTAGCTCATGGTTTTCAGGTACCTGTCTTTGTTAAATGAAA CAATGCCACATATACATTGATTTGAATGAGATAGCTTCTTCAATAAAGAGCTACAAAGATTGAGGACCAGTAACCCTCGT AAAGAAGAAATGAAGACATCCAAGAAATAAGAACATCATAACGAAAGTTGAAGAAACTCTTTTGCATAATAGGACCCGTT TGGATGCAGATTAAAAGACCTTTATTGGAGATAAGCTTCAATACGTGTTCTTTGATTTGTATCCAAATAGGCTCATTGTC AAAGAACTTCATTAATCCCAAACAATGGATCACGACCACTTCGATAGCTATTGATCTCATGGGATTGGGGGACTAGATAG AGATTTTTGCTATTTGGATTTTTTTCAGTATGAAGCCTGTCATGTTTGCCCTAGGGAAGCAAAAGATATTAGTCCACACT TCTTGAAAACTGTATGAGGAGCTTCAAAAATTAGTTCTTTTTTTGAAATGGGTTTTCACTGGTTTTCAGGCTCAGTTGTT GATATTGTCAGAAAGAAATGAAGATGGCAACATATCTGAGGACAAAGAAGAGGGAGCCAAAACTGTTGTGCATTTCTGCC AGACATTAATTTCTGCTTTTGAGAGTTTGATAAGCACAGATGAGTAAGTGAACTATTTCTCAGGATTTTAATCTTTTGCA GTGATTTCTAAATATGAAACCATGTTATAAAAATCCATAATTTTCTTGGTTAATCTTGGCAATTCTGAAATTTGTTTCCT GTCATGGTGTAGGCATGCGGAGATCCTGTCGATTGGAAAAGAGGCGCTATTTACTGCTGCAACTATTATCTCCATGAAGT CATAGGAGCCTAAGTAACTGCTTTGAATTGATTAACGTATTCTGTGATTCTGTCTGATACAACAAGATCAACCAACTCTA TTCTATATTGACTTGATTAACTCATTCTTTTTGCATAGTTGTAGGCTTTATGTTAATTAAATGCAATGGGATATACCGAT ATAGTACATTGTTAGGGAGTTCAATTGCCTTGATAAGATCCTTGTCATATGAGATCTTAATTCTTACAAGACGTGGGTGA GAGTTGTGAAGTGTTTCCCTTATGGAGGACCATACTCGATTTAAGATTATCCTAATCATGGAGTGGAATGTTAATAGATG CAATAAATTAGGACACCATAGCTAGAAGTGTCCAACTCATAGAAGGGACAATAACAATAACCAAGAAGGAATTTCCAAGT GTCAAAGTGGTGGGTGCTAGCATATCTCTGAACAAGGAATACAAGCAATGTTCACTTGGTCACCCTCTTTTTGATTGATT AAAATGCATGAGTCTCGTCAAATTGGTTGTGGGGCCATATAATTTATTAGGCCCTGTGTGAATTTTAACTAATTGAAGAG GGTTAGAAAGAAAGTTGATGTGAGTTTTTTTTTTTACATAAGAAATATAATTTGCACCCGTCAGAGTTTGATTCCTAGAC CTTCCCCACCTAACCCATATGCTCCCTAACTCTTACCAATGAGATTATTTGGCAGCTAGGGAGACAGGAATCGCCCATGC ACACTACAATCTCTTCTTTTATTTTTCACCCCTGCACGCTACAATCTCTTCTTTTCTCCCCGTGTTTCCTCCCTCTCACC ACTTTAATCGAACTCAATTTATCCATAGCCGCCACAAAAGCCTGAAAAAACCGCTGCTTATCCTTCGCAAGATCCACAAC CATCGCCTTCGTTCGTGGATCCAAAGCCAAACCTTGATCTGAACCCAACAAACCCATCTTCTTCTGCAAGTTACTGTAAT ACGCATGATCAAACACGAAAGGTGTAGTAGCATCGAACGGGGCAACGATGTCGGAGTTTCCACCGGAGTTCGGACAATAC AGTCGCAGAGCGTGAACCAACTTCGGATCCATGTCCGGGTCGGGTTGATCCGTGCCCTTGAAATTGTAGAGTCGGGTCAC GAAGTGGTTGCAGTGGGCGAACCCGATTGTGTGGGCGCCGGAGAGAGTGACCATGTCTTGTGTGGCTAGGCCTTTGGAGT TGAAGAGCTTGATGAGTTGATCAACGGTGAAGTTTGCACGTGGGATGTTGGGGGCCACTCGTGATGCCTTTGAGATCTTT CCATCCCATCTTCCTTTTTTCACTTGGTAATAGGGTCCTCCTGCCTGTGCCACATTTAAACTAAATAAAATCATCATGAA AACCCAACATCAAATCTAATGGAATTAAGTCTTTTTCTTCCTAAGGTATTCCATGGCCGACAAACTAATCATTCAAGGTT CAGAGATCATGTTAAGTGGGTAGACATCTCCCAACAAATTCTTAACTAAATGCTTAAAAACTCAAGTATCTATAGTTGTG CTACACCTTGCTTAATTAAGTCATTTCTCTTACAAGTACAAGGCTCCTACTACATATATCAGCTTGATATGATATGGAAT AGCAAAGTTGGTCAATTTAGCATCTGAATGAATTTTTCGCTGCAAACTTAGTCCATAGAAAAAGAAAATACATGTTTTTA AATGTATAAAATGTTAGTCAAATTAGTATTTATACATTCAAGATTTTTGAATGTATTTTCCAGACAACTAACTTAGCAGT GGCAAAATCTTTCAGAATTCACTCAAAGGACAATATACTAAAAATATTAGAGCTAAGGCTCAGAAGCAGCCTTGTGTTTG GTGCCCAAATAATTTACCTGTAAAAGTGCAAAAGTTCAGCTATTCTAGAGTCTAACATACCAAAATATATGACAAGAAGA AAACAATTCTAAACAGACTTTATGTATGCAGAGTCCTTGAATGGAACAGCCACTCTGCAAACTGCCAAAATTGCAATCAA TATTATAGTAGTTGAGAAATTTTCATTTCTTAATTGGAGTTGTCTAACTTCAAGTATTAATAACTTTATTATAAGTGGAT TAGTTAGTGGTGCTAAAGATAAAATGGTTAAGAACATGGTGTTATATTGTCCTTTCCCCCCTTTCTCTTAACATTTAAAA ACCTATTACAAAAACTAACATCTCATTTCTTTAAATATAAAGTACATAATAATGTCATCAGAAATGACAGACAAGTAGGC TGCAATGAATAATATAAGTACCATAATACTGCGCCTAAATTTTTTAGAATAGCTTGTTATTTTGGCATTGATATCATCAT CAAATTTCCCTGGTATTCTATAAAAGGGGAAACGGGAAACCACCTTTGTCTTTCCAAAACCGTTTTTCTTCTGGGTTAGC ACTTAGCAGTATGGAAGCAAAGCTGCTGAAAAAAAAGGAAGAAAATTTGAACTTACACGTCATGTTTGAAAACTCGTTCA AGAAACCACAGTAAAACCAAAATCACAGTAAACAAAAGTTCCAGCTAAGGAAATTTACTTGTGTCTACCATAATTTTAGC TTAACCATAGTTTTTGATTGAGTTTCAAGACAGGCACTCAGAATAGAACTAGAAAAGCATAATATACATTGCTTCATAGT CAAATAGCCCCTCTCCTCTAAGGCCAAAGTAAGAGGAACAAATATTGTTACTTCTAAGAGCAAAACCATTTAAAACTGTG ATCAGGTACCTATAATATATCAAATCTTAGCACGTGAGGGCATTACCAAAGTGCCCACATTTTAACCAGAAAGTAGGGGT GGAATAAAGAGAAACAAATAAAGATATTAAATAGGAACTGAAACAAAAAACCAGTAACTTACCAGGTGAACATAATCTCT GGCTGCAATTGCAAGAATGTCTGCACAAGACACAATGCCAGGGCACTTTTTCTCCACTATTTCCTTGGCCTTCCTCACAG TCTCAAAGCCTTCCACCCTCAAATCTTTGTTATCCTCTGCATCTTTCTCAGCCAATTCCTTGCTTCCAGGCTTTGATGCT ATTAAAATTGAAGCATCACATCCCTGCACTCACCCATTCAAGAATTATCTTATCACAAACCCCCCCATTAAAAAATGTTC CAAGAACAAAAATTCACAACCAAACACAAATGACTAATTTAACAGCATCTTTGGATTCACATTCAGATCTTCTACAGTCA ATTCTGCTCCCACAAAAGCTACTAGAAGTAGCTTTTCTCATAATCAATTTGCATTCCAACGTGAAAATCTACCGTGTATC CGAACATGCACTAAATGCAGCTGGAATTACTGAAACATTTGTTCTAAAAGTATTACTGGTGGATGAAGACTAGAAATTAT AGGAATTATCTTATCA
CDS sequence (LotjaGi4g1v0065000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACCCTAGCAGTGGTCAAAGATGGAACAGCGCAGGGGTAGAAGATAACATGCTAGCCATGTTTGATGCCTCAGA AGCTAAAGATGCTCATGAAGATGCCCTCGATGATCGGATTGCTTTTTTGGATGCTGTTCGAGCTTCTATTGCTCTTGGAC ATGGAAAGCCACCCACTAAAAAAATATTTGGGGCAGTCTTCCATACGTTGAGGACGGGGAAGACCATAGAGCTGATAATG GCGAGTTATAAGCTTCTGGTTGATTTAGAAAAGCACTTCCCTCGTGTGTATCTATCTGGCAGAGATAATTCCCAATCACC CTCTAACTCGCCATCAAAGTTGGTTGTAGTTGAAAAGGCATGGTATCCCATTATTGGCCTTGATAATGCAACTGCTGTCA CTGAAGCAGGTAACAAACAGTCCGGTGGACCTCTTGATCCCTCTAGCTTTCAACTCATGATTGAAGATCTCGCTGAAGTT TTAACTGAGGACGAATTTCAAACATCAAGTGTGAAGACCCTGCAGAAATGGTTACTCTTCCAATATCTTGTGATTGTTTT CCAAGGCGATTTTCTCTCTCGTAATGCAACCATGGACTGGAGTATGCAGAGGGAATCTTTGCTCCACAAGTTACTGGGAT CTAGGAAAATAAATTACAAAAACTTGATGAAAGACTGTCTGAAAGTTATTTGTCAACTATGTCAACTTCTTCAAAAAGAA CTCGGTGAACATCTAGAGCTTCAAAGGAGTTCTGAATCTCAGTTATCCAAAAATTGTGTTACTGCATTATCTCTTGCCTT ACATGAAGTATTAAAGAACACATGTATCTCTATGGACAAACTTTTGGTGATGATCATGGACCTTGATATGTCTAGGAAGA AAGCAGATATTGAAGGTCGTACTTCAAGAGCTGATAGTCCAAGAACACCTTTGATCGACATAATTCTGGATGAACTAGCT TACAGCAAAGATACTGTTCCCCTTTTCCTCGAGATCTTCAGTGAACCTAAATGGAAGCTGGAAATAATTGTACAGTATCT CTGGAGATACATAACCAAGCCTTCTGTTCGCACTCGTAGGACAAACAATTGTACTGAAGATGCAACATTTGATGAGGCTT TGAAGTGCTTTTCAAATAAAACAGGCACTAAGAGCACAATAAAAAAAATTGGTGCAGATGTAATTCAGTTACTTCTAGCT CATGGTTTTCAGGCTCAGTTGTTGATATTGTCAGAAAGAAATGAAGATGGCAACATATCTGAGGACAAAGAAGAGGGAGC CAAAACTGTTGTGCATTTCTGCCAGACATTAATTTCTGCTTTTGAGAGTTTGATAAGCACAGATGAGCATGCGGAGATCC TGTCGATTGGAAAAGAGGCGCTATTTACTGCTGCAACTATTATCTCCATGAAGTCATAG
Protein sequence (LotjaGi4g1v0065000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENPSSGQRWNSAGVEDNMLAMFDASEAKDAHEDALDDRIAFLDAVRASIALGHGKPPTKKIFGAVFHTLRTGKTIELIM ASYKLLVDLEKHFPRVYLSGRDNSQSPSNSPSKLVVVEKAWYPIIGLDNATAVTEAGNKQSGGPLDPSSFQLMIEDLAEV LTEDEFQTSSVKTLQKWLLFQYLVIVFQGDFLSRNATMDWSMQRESLLHKLLGSRKINYKNLMKDCLKVICQLCQLLQKE LGEHLELQRSSESQLSKNCVTALSLALHEVLKNTCISMDKLLVMIMDLDMSRKKADIEGRTSRADSPRTPLIDIILDELA YSKDTVPLFLEIFSEPKWKLEIIVQYLWRYITKPSVRTRRTNNCTEDATFDEALKCFSNKTGTKSTIKKIGADVIQLLLA HGFQAQLLILSERNEDGNISEDKEEGAKTVVHFCQTLISAFESLISTDEHAEILSIGKEALFTAATIISMKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 471 | 471 | 9.4E-182 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. | ||
| Cellular component | Smc5-Smc6 complex | A conserved complex that contains a heterodimer of SMC proteins (Smc5p and Smc6p, or homologs thereof) and several other proteins, and is involved in DNA repair and maintaining cell cycle arrest following DNA damage. In S. cerevisiae, this is an octameric complex called Mms21-Smc5-Smc6 complex, with at least five of its subunits conserved in fission yeast and humans. | ||
| Biological process | Negative regulation of defense response | Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response. | ||
| Biological process | Negative regulation of transcription, DNA-templated | Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0065000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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