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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0070700 |
| Transcript ID | LotjaGi4g1v0070700.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G33950.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q940H6|SRK2E_ARATH Serine/threonine-protein kinase SRK2E; TrEMBL-Plants: tr|A0A072UYK5|A0A072UYK5_MEDTR Sucrose nonfermenting 1(SNF1)-related kinase; Found in the gene: LotjaGi4g1v0070700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8965004..8968032) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCGACCTCCGACCGCTGTTGGGCCTGGAATGGATATGCCGATCATGCATGACAGTGATCGCTATGAGCTTGTGCG TGATATTGGTTGTGGAAATTTCGGGGTAGCTAGGCTCATGAGGGACAAACAGAACGATGAGCTTGTTGCTGTCAAGTATA TTGAGCGAGGTGAAAAGGTTAGTGTCCTAAATTCTTGAGGCTTTTCCTTCTTTCCTCGGTTCACTTGTTTTTAACTAATT TTTACTAATGTGTTTCTTTGTAGCATAGAATTCCTGTTTTTGGTTGTGAGAAAAAAACAATTTTATTGTAATTTTATGAA GGTATCTTAGTTTCACATATGTTGTGTACTTGTGTTACATTCTCTTGTTATATCTCTTTCTTGTATTCTTGTCTTTAGAC GGACTTTAGGTCCTTGTTAGAATTTGGGCTAGCTTAAGGAGAAAGTTCATCTACCCTTTATAAGTATTTATTTCGTCATA TCTCTAGTCAATGTGAGATTTTTCAACAGTCCTTTAGAAAATCGTCAGATGTTGGTACGCTTATTGGTTAATAGCACATG ATGATGATGATGATGATTAGAGGGAATCTTTTTTTGTTATTTTCTCCTTAATGTAAAATTCGATGCATTGGTTGGTACTT TTGGTAAAATTGCTTCAGTAGGCTTGATTGTAGAACTTCTCATGAGTTTGGTCATGCTGCTCTCTTAACAGATAGATGAA AATGTACAGAGGGAAATTATAAACCACAGATCATTGAGACATCCCAATATAGTCAGGTTCAAGGAGGTCTGTACACTCCC AATATCATATCCTATTTCTTCATATCATAGAAGTATCTTAGTTACTACTTAGTCCTTTGATGGTGTGACTTTAGGTTATA CTGACACCAACACATTTGGCAATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGGATATGCAATGCTGGGAA GTTCAGTGAGGACGAGGTTCTTATCCGTCGCATTCATTCATTTGTGTAGTGCTGCTACTGCATATGCCTTTAATGCTCAC TAATCTATTCTGCAGGCACGCTTTTTCTTCCAACAACTTATATCAGGTGTTAGCTACTGTCATGCAATGGTACATTGTAG TATTTGCTTTTACCCCAAGTGCATTTGCTGCTCAGAAGAAATAATGCGATGTCTGACTTGAGCTTCTCTATTTGTCTTCT TTAATGAAGCAAGTGTGCCATCGTGACTTGAAGTTGGAAAACACATTGTTGGATGGTAGCGCAGCTCCGCGTTTGAAAAT TTGTGATTTTGGCTATTCAAAGGTATATAGAGTCTATATTTATCTGCTTTTTATTTTTTGATACCTTCACAGTTTATTGA CTTTGTAGGTTTCTCCAAATTCTAGATCAAGCAAATTTCTGTATCTGTTATTTGTCTTTGGTTGATTAATTTCTGGTGCC CATGCATCTTGTTTGTCTTAAATTTTCAGTCCTCTGTGCTACATTCACAACCAAAATCTACTGTTGGTACCCCTGCATAT ATTGCACCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGGTATGTGGTAACTTCTATCACTTTATAAGTTCATCTTA CTAGTTAGATATTGATCATTTCCCATTAAAATGTTTGTCATTTAGATTATGTGTTTCTATAAATTTTGATGATGATCACA GCTTATTTAGACCTTTTATACCATTAAGTTGATATTTGTGACCACAATGACCTGTTGATTGGCTCCATTGCTATTAGACC CTCCCAACTTAAGTACCAGGAACCATTTGGTCTATTGTAAGCAACTTTACCTTGTTTTTTACACACGAGAGTACCCGTGA CCTCAGTCCCATGGCAACAACTATTTACCATTGTGTCAAGGCTCCCCTTCTATTATTTTCTGTACTAATTATCTTAAATT GTTTAATCTATACTAATGTTGACACGCTCTTATGACTCAGATTGCAGATGTATGGTCTTGTGGGGTGACCTTATATGTCA TGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAAGAACCTAAAAATTTCCGCAAGACGATACATGTAACCCAGTGCACC TATTTTTTTTACTTTGATGTGTTTCTTTGACTGAATTAGTTTTCCTAAACTGCTGGATGTTGCTTGCAGAGGATTTTGAA TGTTCAGTATTCAATTCCTGACTATGTTCACATATCTCCCGAATGCCGTCATCTGATCTCAAGGATTTTTGTTGCTGATC CTGCAAAGGTAAGTATTTTCCTTATTCATTTGCTGAAACTTTTGTGCCTTTTATTATATACTTGAATCTCATGATTTGCA TGATTTATATGTGGATTGTTTAAGTGATATGTATTCTAAATTGATTCCATGTAATGTTCTAAAGCAGAGAATAACTATGC CTGAGATTAGAAACCATGAATGGTTTTTGAAAAACCTTCCAACTGATCTAGTGGATGGGAATACGACGAACAACCAGTTT GAGGAGCCTGATCAACCGACGCAAAGCATCGATGAAATCATGCAGATCATTTCTGAGGCTACGATTCCTGCAGCTGGAAC TCAATCTCTCAACCAGTATCTTACTGGAAGCTTGGATATTGATGATGACATGGATGATGACTTAGACACTGATCCTGACC TTGATATAGATAGTAGTGGAGAAATAGTTTATGCTATGTGATCAAGTTATAATGTTTATACCCTTGGTTGTTCAGTGTGT GTGGAAAATGTGGAAAAATGTTTCACTTTCTTCTACCATGTAGGATTCTGTATCTGATTTTCCTTCCATATAGTGTGAGA GAACTCATCCTACTTGTATTTATGATCTACCTTTGCTGCTGTGTATTGATAGCTTCTTGTTTTTGTATTGCCATTTGAAT TAGTAATCTTCTTGCAATTACATTTCTAGTTGTATTGATTGTGTTTGTATTTTGATGAATTCATTCTAGGGACATTGAAG GATAGATAAACAGATTTATGGACAGAGTATTGAACTTCAAACTGCAGAACTACACCAATTCATAGCTTC
CDS sequence (LotjaGi4g1v0070700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGGATATGCAATGCTGGGAAGTTCAGTGAGGACGAGGCACGCTTTTT CTTCCAACAACTTATATCAGGTGTTAGCTACTGTCATGCAATGCAAGTGTGCCATCGTGACTTGAAGTTGGAAAACACAT TGTTGGATGGTAGCGCAGCTCCGCGTTTGAAAATTTGTGATTTTGGCTATTCAAAGTCCTCTGTGCTACATTCACAACCA AAATCTACTGTTGGTACCCCTGCATATATTGCACCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGT ATGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAAGAACCTAAAAATTTCC GCAAGACGATACATAGGATTTTGAATGTTCAGTATTCAATTCCTGACTATGTTCACATATCTCCCGAATGCCGTCATCTG ATCTCAAGGATTTTTGTTGCTGATCCTGCAAAGAGAATAACTATGCCTGAGATTAGAAACCATGAATGGTTTTTGAAAAA CCTTCCAACTGATCTAGTGGATGGGAATACGACGAACAACCAGTTTGAGGAGCCTGATCAACCGACGCAAAGCATCGATG AAATCATGCAGATCATTTCTGAGGCTACGATTCCTGCAGCTGGAACTCAATCTCTCAACCAGTATCTTACTGGAAGCTTG GATATTGATGATGACATGGATGATGACTTAGACACTGATCCTGACCTTGATATAGATAGTAGTGGAGAAATAGTTTATGC TATGTGA
Protein sequence (LotjaGi4g1v0070700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEYASGGELFERICNAGKFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSAAPRLKICDFGYSKSSVLHSQP KSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECRHL ISRIFVADPAKRITMPEIRNHEWFLKNLPTDLVDGNTTNNQFEEPDQPTQSIDEIMQIISEATIPAAGTQSLNQYLTGSL DIDDDMDDDLDTDPDLDIDSSGEIVYAM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 263 | 263 | 5.3E-164 | – | |
| PANTHER | 1 | 263 | 263 | 5.3E-164 | – | |
| Gene3D | 1 | 240 | 240 | 9.9E-67 | – | |
| SMART | 1 | 184 | 184 | 2.6E-41 | ||
| ProSiteProfiles | 1 | 184 | 184 | 36.16 | ||
| Pfam | 1 | 184 | 184 | 1.5E-51 | ||
| SUPERFAMILY | 1 | 225 | 225 | 5.06E-60 | ||
| ProSitePatterns | 43 | 55 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0070700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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