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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0070700 |
| Transcript ID | LotjaGi4g1v0070700.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G33950.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q940H6|SRK2E_ARATH Serine/threonine-protein kinase SRK2E; TrEMBL-Plants: tr|A0A072UYK5|A0A072UYK5_MEDTR Sucrose nonfermenting 1(SNF1)-related kinase; Found in the gene: LotjaGi4g1v0070700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8965352..8968225) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTGAACCACCGCCATTCTTCCTTGTTCCCTTTCTTTCTGCTTTTGCACTTGGAATGAATGGATGATAATCATTTGAG TGTTGATTGAGCCTTCTTTCTTCACTTTTTTTTGTTATCATGTCATGCACTGCAGTTGTTCGCACTAAGCGGTAAACGTC TGATCATATTTTCTTCTTCTTCTTTTTGAGTAAATGGATCGACCTCCGACCGCTGTTGGGCCTGGAATGGATATGCCGAT CATGCATGACAGTGATCGCTATGAGCTTGTGCGTGATATTGGTTGTGGAAATTTCGGGGTAGCTAGGCTCATGAGGGACA AACAGAACGATGAGCTTGTTGCTGTCAAGTATATTGAGCGAGGTGAAAAGGTTAGTGTCCTAAATTCTTGAGGCTTTTCC TTCTTTCCTCGGTTCACTTGTTTTTAACTAATTTTTACTAATGTGTTTCTTTGTAGCATAGAATTCCTGTTTTTGGTTGT GAGAAAAAAACAATTTTATTGTAATTTTATGAAGGTATCTTAGTTTCACATATGTTGTGTACTTGTGTTACATTCTCTTG TTATATCTCTTTCTTGTATTCTTGTCTTTAGACGGACTTTAGGTCCTTGTTAGAATTTGGGCTAGCTTAAGGAGAAAGTT CATCTACCCTTTATAAGTATTTATTTCGTCATATCTCTAGTCAATGTGAGATTTTTCAACAGTCCTTTAGAAAATCGTCA GATGTTGGTACGCTTATTGGTTAATAGCACATGATGATGATGATGATGATTAGAGGGAATCTTTTTTTGTTATTTTCTCC TTAATGTAAAATTCGATGCATTGGTTGGTACTTTTGGTAAAATTGCTTCAGTAGGCTTGATTGTAGAACTTCTCATGAGT TTGGTCATGCTGCTCTCTTAACAGATAGATGAAAATGTACAGAGGGAAATTATAAACCACAGATCATTGAGACATCCCAA TATAGTCAGGTTCAAGGAGGTCTGTACACTCCCAATATCATATCCTATTTCTTCATATCATAGAAGTATCTTAGTTACTA CTTAGTCCTTTGATGGTGTGACTTTAGGTTATACTGACACCAACACATTTGGCAATTGTAATGGAATATGCTTCTGGAGG AGAGCTATTTGAGCGGATATGCAATGCTGGGAAGTTCAGTGAGGACGAGGTTCTTATCCGTCGCATTCATTCATTTGTGT AGTGCTGCTACTGCATATGCCTTTAATGCTCACTAATCTATTCTGCAGGCACGCTTTTTCTTCCAACAACTTATATCAGG TGTTAGCTACTGTCATGCAATGGTACATTGTAGTATTTGCTTTTACCCCAAGTGCATTTGCTGCTCAGAAGAAATAATGC GATGTCTGACTTGAGCTTCTCTATTTGTCTTCTTTAATGAAGCAAGTGTGCCATCGTGACTTGAAGTTGGAAAACACATT GTTGGATGGTAGCGCAGCTCCGCGTTTGAAAATTTGTGATTTTGGCTATTCAAAGGTATATAGAGTCTATATTTATCTGC TTTTTATTTTTTGATACCTTCACAGTTTATTGACTTTGTAGGTTTCTCCAAATTCTAGATCAAGCAAATTTCTGTATCTG TTATTTGTCTTTGGTTGATTAATTTCTGGTGCCCATGCATCTTGTTTGTCTTAAATTTTCAGTCCTCTGTGCTACATTCA CAACCAAAATCTACTGTTGGTACCCCTGCATATATTGCACCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGGTATG TGGTAACTTCTATCACTTTATAAGTTCATCTTACTAGTTAGATATTGATCATTTCCCATTAAAATGTTTGTCATTTAGAT TATGTGTTTCTATAAATTTTGATGATGATCACAGCTTATTTAGACCTTTTATACCATTAAGTTGATATTTGTGACCACAA TGACCTGTTGATTGGCTCCATTGCTATTAGACCCTCCCAACTTAAGTACCAGGAACCATTTGGTCTATTGTAAGCAACTT TACCTTGTTTTTTACACACGAGAGTACCCGTGACCTCAGTCCCATGGCAACAACTATTTACCATTGTGTCAAGGCTCCCC TTCTATTATTTTCTGTACTAATTATCTTAAATTGTTTAATCTATACTAATGTTGACACGCTCTTATGACTCAGATTGCAG ATGTATGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAAGAACCTAAAAAT TTCCGCAAGACGATACATGTAACCCAGTGCACCTATTTTTTTTACTTTGATGTGTTTCTTTGACTGAATTAGTTTTCCTA AACTGCTGGATGTTGCTTGCAGAGGATTTTGAATGTTCAGTATTCAATTCCTGACTATGTTCACATATCTCCCGAATGCC GTCATCTGATCTCAAGGATTTTTGTTGCTGATCCTGCAAAGGTAAGTATTTTCCTTATTCATTTGCTGAAACTTTTGTGC CTTTTATTATATACTTGAATCTCATGATTTGCATGATTTATATGTGGATTGTTTAAGTGATATGTATTCTAAATTGATTC CATGTAATGTTCTAAAGCAGAGAATAACTATGCCTGAGATTAGAAACCATGAATGGTTTTTGAAAAACCTTCCAACTGAT CTAGTGGATGGGAATACGACGAACAACCAGTTTGAGGAGCCTGATCAACCGACGCAAAGCATCGATGAAATCATGCAGAT CATTTCTGAGGCTACGATTCCTGCAGCTGGAACTCAATCTCTCAACCAGTATCTTACTGGAAGCTTGGATATTGATGATG ACATGGATGATGACTTAGACACTGATCCTGACCTTGATATAGATAGTAGTGGAGAAATAGTTTATGCTATGTGA
CDS sequence (LotjaGi4g1v0070700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCGACCTCCGACCGCTGTTGGGCCTGGAATGGATATGCCGATCATGCATGACAGTGATCGCTATGAGCTTGTGCG TGATATTGGTTGTGGAAATTTCGGGGTAGCTAGGCTCATGAGGGACAAACAGAACGATGAGCTTGTTGCTGTCAAGTATA TTGAGCGAGGTGAAAAGATAGATGAAAATGTACAGAGGGAAATTATAAACCACAGATCATTGAGACATCCCAATATAGTC AGGTTCAAGGAGGTTATACTGACACCAACACATTTGGCAATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCG GATATGCAATGCTGGGAAGTTCAGTGAGGACGAGGCACGCTTTTTCTTCCAACAACTTATATCAGGTGTTAGCTACTGTC ATGCAATGCAAGTGTGCCATCGTGACTTGAAGTTGGAAAACACATTGTTGGATGGTAGCGCAGCTCCGCGTTTGAAAATT TGTGATTTTGGCTATTCAAAGTCCTCTGTGCTACATTCACAACCAAAATCTACTGTTGGTACCCCTGCATATATTGCACC AGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTATGGTCTTGTGGGGTGACCTTATATGTCATGTTGG TGGGTGCATATCCTTTTGAGGATCCAGAAGAACCTAAAAATTTCCGCAAGACGATACATAGGATTTTGAATGTTCAGTAT TCAATTCCTGACTATGTTCACATATCTCCCGAATGCCGTCATCTGATCTCAAGGATTTTTGTTGCTGATCCTGCAAAGAG AATAACTATGCCTGAGATTAGAAACCATGAATGGTTTTTGAAAAACCTTCCAACTGATCTAGTGGATGGGAATACGACGA ACAACCAGTTTGAGGAGCCTGATCAACCGACGCAAAGCATCGATGAAATCATGCAGATCATTTCTGAGGCTACGATTCCT GCAGCTGGAACTCAATCTCTCAACCAGTATCTTACTGGAAGCTTGGATATTGATGATGACATGGATGATGACTTAGACAC TGATCCTGACCTTGATATAGATAGTAGTGGAGAAATAGTTTATGCTATGTGA
Protein sequence (LotjaGi4g1v0070700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRPPTAVGPGMDMPIMHDSDRYELVRDIGCGNFGVARLMRDKQNDELVAVKYIERGEKIDENVQREIINHRSLRHPNIV RFKEVILTPTHLAIVMEYASGGELFERICNAGKFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSAAPRLKI CDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY SIPDYVHISPECRHLISRIFVADPAKRITMPEIRNHEWFLKNLPTDLVDGNTTNNQFEEPDQPTQSIDEIMQIISEATIP AAGTQSLNQYLTGSLDIDDDMDDDLDTDPDLDIDSSGEIVYAM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 98 | 98 | 7.6E-37 | – | |
| PANTHER | 8 | 358 | 351 | 3.9E-222 | – | |
| PANTHER | 8 | 358 | 351 | 3.9E-222 | – | |
| SUPERFAMILY | 15 | 319 | 305 | 6.61E-85 | ||
| CDD | 22 | 278 | 257 | 0.0 | – | |
| Pfam | 23 | 279 | 257 | 8.9E-72 | ||
| SMART | 23 | 279 | 257 | 1.0E-98 | ||
| ProSiteProfiles | 23 | 279 | 257 | 47.778 | ||
| ProSitePatterns | 29 | 52 | 24 | - | ||
| Gene3D | 99 | 287 | 189 | 9.7E-63 | – | |
| ProSitePatterns | 138 | 150 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0070700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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