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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0072300 |
| Transcript ID | LotjaGi4g1v0072300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxylesterase 1; TAIR: AT3G48690.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9SMN0|CXE12_ARATH Probable carboxylesterase 12; TrEMBL-Plants: tr|A0A151UAJ0|A0A151UAJ0_CAJCA Putative gibberellin receptor GID1L3; Found in the gene: LotjaGi4g1v0072300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9134869..9136340) extracted from Lotus japonicus Gifu genome v1.2.
TGCAATTGGACTAAAGTCATGTTATTTTAACTGTAATTAAAGAATCCGAAGGTTTAACTCTCGGACTAGTCCAGAACATC AACCTCTGGACTGGTATGGAGGTTTAAGTCCCGGAGGGTATTCCCGGCATTTTTTTAAAAAGACTAGGGTGGCAATTCTA AACCCAGGGGTGGGAAATCTAATTCCCCGTGCCCGTGCGTGAACAAGAGACTACGGTATCAGAATTTTTTTATGAAGTAG TCCCTGAAGTTTTCCCTTACCTTTACATTTGCCTTTTTTTTGTTTTTTTTTACCCAAATTATGATCTGGGCCAAAGAAAA AAAATTTTTTTTTGGCCAGAGCCTGGGCACAGGCCCAGGATGGCCAGGCGGTACATCCGCCTCTGTTCATCTCATTCTCA GTCACCACTCTGTTTTGCTCTGTTTTTCTGCCATGGATTCAACCTCTAGCGAAGTAGTCCAAGATTTCTCACCCCTCATC AAAGTCTACAAAGACGGCCGCGTAGAGAGACTCGTAGGGTGCGAATTGGTTCCCCCATCACTGGATCCCGCAACCAACGT TGAATCCAAAGACATTGTGATCTCAAAAGACGACAACGTATCTGCCAGAATTTTCCTTCCAAAACTCACCAATCCAAACC AGAAGCTCCCTCTCCTTGTTTACTTCCACGGTGGTGGTTTCTGCGTAGGAACACCCTTTTCTCCTCATTATCACAACTTC CTCAACACCATTGTTTCTCAGGCTCGTGTGGTTGGTATCTCTGTTCATTACAGAAGAGCCCCAGAGCACCCTGTTCCAAT CGCTTTCGAAGATTCATGGACTTCGCTCAAATGGGTTGCTTCCCATTGCGGCGGAAACGGCCCTGACGAGTGGCTCAACC GCCACGCTGATTTTGGTAAGGTGTTCATCTCAGGGGACAGTGCAGGGGGAACCATTGCACACCAAATGGGTATTCGGGTC GGGGCAGAGGGGCTTCCGGGTATCAACCTTGAAGGGATTGTTCTGGTTCATTCCTACTTTTGGGGTGTGGAGCGAATTGG GTCAGAGTCAGAGCAACCGGAGCTTGCGGCGTTTATGGGGAATTTGTGGCGGTTCACATGTCCCAGTAGCACTGGATACG ATGACCCGTTTTTGAATCCGGCTAAGGATCCGAATTTGGGGAAGCTTGGTTGTAAGAGAATGCTGGTTTGTGTTGCTGGG AATGATATTTTGAAGGACAGGAGTTGGTATTATAAAGAATCACTGGAGAAGAGTGAGTGGAAAGGGGTTGTGGAGGTGGT GGAGTCAAAAGGGGAAGATCATGTATTTCATCTCCTCAAGCCAAACTGTGAGAATGCTCTCTCATTGTTTAATCAAATTG CTTCCTTTATCAATCATAGTTAAGTTATGCAGTAGTTTATTCAAAAAAAAAAAAAAAGTTATGCAGCAGAACTTATCAAC CAGAGTTTCTTTATTGCCCGTTAATAATATGG
CDS sequence (LotjaGi4g1v0072300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCTGGGCCAAAGAAAAAAAATTTTTTTTTGGCCAGAGCCTGGGCACAGGCCCAGGATGGCCAGGCGGTACATCCGC CTCTGTTCATCTCATTCTCAGTCACCACTCTGTTTTGCTCTGTTTTTCTGCCATGGATTCAACCTCTAGCGAAGTAGTCC AAGATTTCTCACCCCTCATCAAAGTCTACAAAGACGGCCGCGTAGAGAGACTCGTAGGGTGCGAATTGGTTCCCCCATCA CTGGATCCCGCAACCAACGTTGAATCCAAAGACATTGTGATCTCAAAAGACGACAACGTATCTGCCAGAATTTTCCTTCC AAAACTCACCAATCCAAACCAGAAGCTCCCTCTCCTTGTTTACTTCCACGGTGGTGGTTTCTGCGTAGGAACACCCTTTT CTCCTCATTATCACAACTTCCTCAACACCATTGTTTCTCAGGCTCGTGTGGTTGGTATCTCTGTTCATTACAGAAGAGCC CCAGAGCACCCTGTTCCAATCGCTTTCGAAGATTCATGGACTTCGCTCAAATGGGTTGCTTCCCATTGCGGCGGAAACGG CCCTGACGAGTGGCTCAACCGCCACGCTGATTTTGGTAAGGTGTTCATCTCAGGGGACAGTGCAGGGGGAACCATTGCAC ACCAAATGGGTATTCGGGTCGGGGCAGAGGGGCTTCCGGGTATCAACCTTGAAGGGATTGTTCTGGTTCATTCCTACTTT TGGGGTGTGGAGCGAATTGGGTCAGAGTCAGAGCAACCGGAGCTTGCGGCGTTTATGGGGAATTTGTGGCGGTTCACATG TCCCAGTAGCACTGGATACGATGACCCGTTTTTGAATCCGGCTAAGGATCCGAATTTGGGGAAGCTTGGTTGTAAGAGAA TGCTGGTTTGTGTTGCTGGGAATGATATTTTGAAGGACAGGAGTTGGTATTATAAAGAATCACTGGAGAAGAGTGAGTGG AAAGGGGTTGTGGAGGTGGTGGAGTCAAAAGGGGAAGATCATGTATTTCATCTCCTCAAGCCAAACTGTGAGAATGCTCT CTCATTGTTTAATCAAATTGCTTCCTTTATCAATCATAGTTAA
Protein sequence (LotjaGi4g1v0072300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIWAKEKKFFFGQSLGTGPGWPGGTSASVHLILSHHSVLLCFSAMDSTSSEVVQDFSPLIKVYKDGRVERLVGCELVPPS LDPATNVESKDIVISKDDNVSARIFLPKLTNPNQKLPLLVYFHGGGFCVGTPFSPHYHNFLNTIVSQARVVGISVHYRRA PEHPVPIAFEDSWTSLKWVASHCGGNGPDEWLNRHADFGKVFISGDSAGGTIAHQMGIRVGAEGLPGINLEGIVLVHSYF WGVERIGSESEQPELAAFMGNLWRFTCPSSTGYDDPFLNPAKDPNLGKLGCKRMLVCVAGNDILKDRSWYYKESLEKSEW KGVVEVVESKGEDHVFHLLKPNCENALSLFNQIASFINHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 46 | 358 | 313 | 4.4E-143 | – | |
| PANTHER | 46 | 358 | 313 | 4.4E-143 | – | |
| SUPERFAMILY | 47 | 358 | 312 | 1.75E-53 | ||
| Gene3D | 49 | 360 | 312 | 4.7E-70 | ||
| Pfam | 119 | 337 | 219 | 2.3E-48 | ||
| ProSitePatterns | 201 | 213 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0072300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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