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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0077100 |
| Transcript ID | LotjaGi4g1v0077100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inosine-5'-monophosphate dehydrogenase; TAIR: AT4G34120.1 Cystathionine beta-synthase (CBS) family protein; Swiss-Prot: sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic; TrEMBL-Plants: tr|A0A0S3R356|A0A0S3R356_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0077100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9886823..9893935) extracted from Lotus japonicus Gifu genome v1.2.
ACGATACGAAGACAAACGACGCCGTAGTAAAATGTCCGCCGCCGACTGTGGCAATGTTTCTTGCACTCCAATTCCACCGC CTTCAACGGAAAAGTAAAAGCATGCTCACGTTTCCTTGCTTTCCCATTTCTATTTATATTTCGTCATACAAAAAATAATT TCATTTATATTCCATTATTCTTTTATATTTCTTATTCCACTGAGATAGCATAGCATAGCATTATTATAATTACTACTTTC CATTCAATTATTTCATCTCATTTGATTCCTGTTCATTGTTCTAGCTCCAACTTCACCAGAAACAGAATCAATCAATTTTC TATTTTTTTAATTGTTTGCAATTTTGCATAGAGAACAAGAAATTTTTAAAAAAAATTAAAAAATAGAAAAATGAGTTCGA TTCATTTGATCAGTGCTCCTCCGCTTCGGTCACTATCTCCGTCCCTATTCCCCCAAACCCATTCTCCGGTTCCATCCTCC GCCGTCCCCAAACGGCGTCGCTCCTCTCACTCCGCTCGGTTCCGCCTTGCCTCCGGCCCAAGCGCAACCGTCGATTCGGT TCCGGTAAGTCTTCATTTCTTCGGATCAAGCTTCTATCTCACGCTATCTATGAGTTTTCATTTGTTTTTTGTTTTTTTGT TTTCAGCGCGAGAATGGAACTTATACAGTTGCTGATTTCATGACTAAGAAGCAGAATTTGCATGTTGCCAAAACCACCAC CACCGTTGATGAAGGTAGTATCCCTCATCATAATTTTCTTTCCTTTTGTTTTTTATGCTTTTTGACCTTTTCAATGCTCT ATTTTATTATTGTGTGGTATGTGATTGATTTTGCTTTTGTTTGTTTTTTCTTGTGTCCCAGCTCTTGAAGCACTTGTCAA AAACAGAATCAGTGGTCTTCCAGTAGTTGATGATGACTGGAATCTGGTAATTGTTTATATCCCTTCACTTTTTTTTTTTA GCTTTATTATGTAATTTTAGTGCTATTTTCCTTTTTAGTGCATCGCGTAGTTTCATTTTGGGCTGGTTTCGTACTTTTAT TATGCCTATGTCCTGGAATGCCAGAACTATGACTGTGTTGTTTCAATTCCCGGAAATAATAGATAGACTGAAAATATTCC AAATGAAACTTGCCGAAATGTTTATCACGGTTAGATTATGAGTGATTTTTTATGCAATGCAGTTGTTATTTGTTATGAAA AAAATTAAGGTATTCAATAACTTGTTCCTTGTGATTCGTCGAAAATTTGTTCGTAATATCTAGCATAGCTCTTGAATTCC TCTCTGACCTTTTTATTATTATTTTTGTGGGTGCAGGTTGGAGTTGTTTCAGATTATGACTTGTTAGCAATTGATTCCAT ATCAGGTACTGCAGACATCACAAATTCAAAATTGAAATTACTGTCGTGTTATCAATGCTCATGTAGGTTGCAGGAATGGG TAGTTTATAATTTTTTTTGAAGTTTGTACTGTTATAGTTGAAAGATTGGAGATAGCCATATGTTTTATGCCCATGTGTAT GTTTGAAAGAGAGACAATAGTTTCTGTTTTAGTAAATGAGTGTAGAAGCTAAATGGCGGTGTTTAATTTTTTCTGCAAGT CTGGAATTGAGCCATTCTGAATCTTGTGGGTCAAGTTGTCTGCATACTTTTGCTATGATTTTACTAACTGCTCTTTTTGG CATTTAGGTGGTAATCAAAACGATTCAAACTTATTCCCTGACGTCAATAGTTCTTGGAAAGTAAGTGTTAAATTCTGCTT CCTTGGTTTTCTATTAGCATTTCTTGTACTACCATATGAATTCTTCTATATGACTTACTGTTAATATATCTACTGTTCAA TCATAAATTACTCCTCTTTAATTGATGCCAAATGGTGCTATAAGACACTGATGTGGTTTAATATGATATGATGCCATTCT ATTATGATGAATGGTGTTGTTCACAATCTTGTATTTGGACAAAGCATTTATGTACTTATTAACAATTCATCTGCTCCGAC ATGAAATCGTAACCTGAGTTATCTTTCCATTTGATGGCGTGACTTTGTTTGGTTGGCTAAAATCTTTATATTCTTGAGAC CATGCTTCTATTTACAGGTTTTCCTTTTCATTAGCATTTCATATCAGTTTCTATCTGTTTTATATATAGCATTGATGATG TGGTTTGTCATTTTGGCTTTCCTGATTGACTAATATTTCATAGGAAAACAAATCCGCATCCCCTGTTACACATTCTGTGG CAACATAACTTTATTTCTTTTCTGTTTGCTTCCTTGAAATTTCTCGCACAGATGGACCTCTATCTGGTATAAGTCGGGTT TAAGTTTTAACAGCTTCCAGTATTTGGTTAAATTGCATAAACTGTTTCTTGGTCTACAACTAAATCATATTTCTCAAAAC ATGGAAAGCTTTTAAAGGAAACTAATAATACTGAAGTTCATGAAGTATTATTATTTCAACAAATGGACCTCCTAACGTTT TAGTTATAGAATCGAAGAAAAATTGCTGTCTAGAGAACAATGTGAGTGAAGTATATCTTCGTGTGTTTACACTGCCGAGA CATTATTCTGTAATAAATTACTGATTGTATTCAAATCTTGTTATATATCACATTATCATAGTTTCCCTATTTAGCTGTTT TGTGAATTGCGGCGTCGGCCTGAATCGCAGAAGGGTTTGGAACCGCTGTCCTCAATCGCAGCCTGAATCGCGGCTTCGCG GGAACTGTAGCAGCACGATTGTGTTTAGGGTTTTACATTGCTGTTGTACCCTTAAAGGATGTCATTAGGGCAACATTTTA AGAGTAAAATGGGGTTTTCGAATCTGAGAAGTTGGGAATATACTCTCCTGCCTTCCCCCCTCTTCTGCCCAACCCCCCCC CCCCCACCCTTCGATCTGACTTGCAGTCAGATTCTGAATCGTCAGGTGACTTCCGGCAATCCCCATCTCCCTTCTCATGT CCTCACTTCAGGTTGCTATTTCTCTGTCCGTCTTTTGCTTTGCTCTGTTTTCTTATTCTCTGCTTTATTCCTGTCAGTTT TTCTCTATTCTCCATCTCCCTTTTTCTTTGATTTCTTACTTATTTATTTTTTTCATAAATCCCAACAGCTTCCTCTTCTT CTGTTCTGCTTTTATTTATTGATTGAGGGGTAAGCTGCTATGCGCCGATATACACTATACCTCTATAGCGCATCGGGGTC GTCCGGCGCATACGGGTTTGACAACACTTGCTGAAATAATTCAGCTCATGCTCCTATCTCCTACGCCTCTTTTGCTTACC TGCCCATTGCACTTCGTGAATATGAACATTCTATCCTTAATCCTCACACTATTTATAACTTCCTCTCATATCATCGTTTG TCTCCTACCCACTATGCCTTCTTCTCATCTATTACCATTCACAAGACAATAAAGGCAGCTTATCCCATCTAGGATGATGA TAGACAATGATTGACGAGATGACGACTTTAGAATCTAACCATACCTAGATACTTGTCCACTGCCTCCAGGACAATGATTG TTGGTTGCTGGTACATCCTGCTTGACGGTTGTATCATTTAACATGAAGCTTATCCCATCTAGGGTGATGACAAAAAATGA TTGACTGAGATGATGACTTTAGAATCTAACCATACCTCAGTACTTGTCCCATTCTCTCCCGGACATCTATGGTGTGAGCT CTTGCGGTTGATGCATTTACAGAACTTATGGTTCTTCAAGGTTTGTTTCTTGGAGGCTTGGAGCTAATGTTAATAACCCA TCGACTCTGCAAGTTCCCTGTAATCATGTCTTTCATGAGAGAACAAATCATACAGAAGTCGATTGTCATTTCATTAGCAA AAAGATAATATGGTATCATTGAAACTTCCACTTTATGCTCCAAGGATCGGCTCGCCAATATCTACATGATGCAACCTAAT TGTAAAGGCCAAGTTCACTTAGCTTAATGTTAGGGGAAGTGGAGGTGTGATGCACTTAATGAACACATGAAGGGGAGCCT AACTGATGCTGAGCTGGCAGCAGGGGAGTGGGTCCCTGTGGTAACTGAGTTGGTTGTGGAAGAGAGTGAAAGAAGGAGTA TAGATGTGTGAAAGGGGGGAGAGGGGAAGGTAGGCTGGTATTAGGCTGGGAATTGGGAGAGATATAGGCACTCTCTGACT TGCCTCCACTGTTGTTTTCTGTTGATTTCATCATTCTGTACATATTCTATACGAGATGCTGTTCCATTTACTGGATCTCT TACTTGAATACCCACAGGTACCATAACAGTTCTAGAGTAATATTTCTGGTACCTATCACTTCTCTAAGTCCTTAGGAGCT CTGAGGATATCATACATATTTTAAAAACAGTTTGATATGATCTATAATTCTTTATACTCAACATTGAGGGAGTGTTGAGA TATCTTTCTATTAATATAATACTGATTGTTGTGTTCAGATTTTGCTGTATAGTGTATATCACATTATCATAGATTCCATA GTTTCATTATTTGACTAGGTAATCTTTATTTAAAAATTGTATATTTCATTCATGTAAATTGATATTCAGATTTCAGTCTC GATTTACACTTTACATTGAGTATGCCATAAGCAAGCCTTAAGCAGCTATGAGCCTATGTTCCAATTATGGTGCTGTAGCA TAGAAAACTTTTTGCTTATGTATGTTTTGAAAGCCAACTGATTGAAGAGCTCAAAACTTGTATAATTGTACTAGAAGAAT TTTATGCCAGTAAAGCCCTTTTAAGATTAAGCATCAATGCCTTTCTATGTATATTTAGGGATGACTAATTTTCTAATTTT TGGGGGAAAGGAAGGGACGGGATAGAGGTAGTTGAGATATAATCTTACGGTCATACCTTTCTTACTTTGCAAAATGGTTA CCAAATTTTGTATTGAACCTGTGATTGCACATGATTCTAAAACCTATCATTTTCTTGATTGTCATTTTACTCTCATCTTT CTTACTTTGAGCAACAGAAGGGAAATTACAATTTAATAATTAAATATTGTTACTCTATTAATTGACTATACATCTAGAAA TTTGGATTTAAATGGTCTATCTTTAGATATGATTCATGACATGGCATTTAGGTGTTGTTTGGTTCATGTAGCTGACTCCA TCATGACACATGCAAATTTCTAATTAATCTTTTCCATGGCAGACATTCAATGAGATACAAAAGCTTCTTAGTAAAACTAA TGGCCAAGTTGTTGGAGACTTGATGACTCCAACTCCCCTTGTTGTTCAAGAATCGACTAATCTGGAGGATGCTGCAAGGT ACTGATTTTGCATTAACATGCAGTGACACTGATTTCTGTGATTATTTTGTTACATTATATTAACTCACTACACCCCATCA CCCCAAAACACACCTCCCTCTTTTTTTAAAAATACAAAAATACCCTCCCTTTACTTTTCACTCACTGTCTCTCCCCTCAC CATCTACCAGATTTTCGAATTTCCAGTGTGTATATATATGTGTGTGTGTTTAAATTCTGGAAAATATAACTTACAGAGTG AAGCTGAAGTCAAAATACATTACCATAGAATCCGGTAATGTCTAATACCGGTAATTAAAATATCCGGTACTTAAGAAATT GGAAAAATAAACTTAGGGTTTTGAACTTTCCGATATTATTAGCGAGGCAGTCCAGAAACTTAGTTTTCCGGAATAAAGAC ACTACCGGATTTTTAAAACTCTGGTAGCTAATTAAGTGACCAAGTCCAATTCTGGGAACATAAGTTTGCGCAGTATAAAA TGCTAAAAAATTGTATCGGAATAAGATTCTGAAACCTTTTTCGAGTTTAAAGCTACTGGGTTATTAATTCCCGGTACGTT ACTAACGAAAAAAGTGATTCTGATTTTAGGTTCTGAAAAACAATTAAACAGATGATATTTTGGGAAATTAGTACTGACGT GGGGTGTGTTTTGGGGTGATTGGGTGTATTTGACAACCCCCGACTCTATTTGATTAAGATTCCTATAATTTTGTAGTCTA AGTTGCAAATGTTTTATCGCCTGACACTGACACTTCTTGTATTAGGCTGTTGCTTGAAACAAAATATCGTCGACTGCCTG TAGTTGATAGAGATGGAAAGCTGGTAAGGAGATCATTCATTCCCTCTTGAAAGTTTAACTTTTGTGCCTCTTGCAGCAGT AACATTGGCTGATTGATTATTTTCACAATTTTGCTAGGTTGGACTTATTACAAGGGGAAATATAGTTAAGGCAGCATTGC TGTCAAAACGTGCTGGTGATAGGCTCTCATAGTTTGACAGATGAAATAGAAATAGCTTTGCTTGTAGGCTGAACTGGCAG TAGTCAGTACAATCTTGGTAATTTTAGGATGTATGTATGTATGTATGTAGTCATTGTCTGGTCGATGTTTGGACGATGAA GAGTGCATGTCAGACCAGAAGAGGAGCTGAAGGCAACTTTTGTTACCTTTCTGTTCTAAGATATTTTAAGTGGTGCGTTA GCACCGTTTATAGAGAAGTGATTTATCGATCTCCTTCCTCAACATAGTTTCTGTGTGAGCTTGAGACATTATATCCAGTT AAACTATATGTAAGCTTTGTTGAATCTGACATTTATGAGATTGGAATGGATCATTTTGAGCACTGTATTATAAACTTGCT GTAAATTTCATACCATTTTAATTAATGTATTATAATTTTTTTTCTCAGGTCTTTTTCATATTGTATTATTAACCAGCTTC TTAGTTTTCTGTACTTATCTATTTATTGTCGAATTTGACAACTCTTACAGTTATGAACATGATCAAGATATTTTTCTTTA CCTAGTGGAATACTGAAGGGGCGGTAATTTTTCTTAATTACCAGGTCTGCAGGTTGGGTTGCAGGGAGGAGTAAAATTTG ATTATTAATGAAAAGCACAAAGGGAGGAATTGAGAATTGACTTTATATATATGAAGCACAGATTAACAGTGTTCTCTTTC TTTTTCATGATTTAGTTGATCTTTTAACCAAGCCAATACAGAATTATGCTACAGGTGTAGTCATAAAACTTTATTTATAA TTTTGAAAAAAATGTAGAAGGCTATAAATATTACTTGAAAAGTTGAAAGTAAACGAAATCTACTGGAGATACT
CDS sequence (LotjaGi4g1v0077100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCGATTCATTTGATCAGTGCTCCTCCGCTTCGGTCACTATCTCCGTCCCTATTCCCCCAAACCCATTCTCCGGT TCCATCCTCCGCCGTCCCCAAACGGCGTCGCTCCTCTCACTCCGCTCGGTTCCGCCTTGCCTCCGGCCCAAGCGCAACCG TCGATTCGGTTCCGCGCGAGAATGGAACTTATACAGTTGCTGATTTCATGACTAAGAAGCAGAATTTGCATGTTGCCAAA ACCACCACCACCGTTGATGAAGCTCTTGAAGCACTTGTCAAAAACAGAATCAGTGGTCTTCCAGTAGTTGATGATGACTG GAATCTGGTTGGAGTTGTTTCAGATTATGACTTGTTAGCAATTGATTCCATATCAGGTGGTAATCAAAACGATTCAAACT TATTCCCTGACGTCAATAGTTCTTGGAAAACATTCAATGAGATACAAAAGCTTCTTAGTAAAACTAATGGCCAAGTTGTT GGAGACTTGATGACTCCAACTCCCCTTGTTGTTCAAGAATCGACTAATCTGGAGGATGCTGCAAGGCTGTTGCTTGAAAC AAAATATCGTCGACTGCCTGTAGTTGATAGAGATGGAAAGCTGGTTGGACTTATTACAAGGGGAAATATAGTTAAGGCAG CATTGCTGTCAAAACGTGCTGGTGATAGGCTCTCATAG
Protein sequence (LotjaGi4g1v0077100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSIHLISAPPLRSLSPSLFPQTHSPVPSSAVPKRRRSSHSARFRLASGPSATVDSVPRENGTYTVADFMTKKQNLHVAK TTTTVDEALEALVKNRISGLPVVDDDWNLVGVVSDYDLLAIDSISGGNQNDSNLFPDVNSSWKTFNEIQKLLSKTNGQVV GDLMTPTPLVVQESTNLEDAARLLLETKYRRLPVVDRDGKLVGLITRGNIVKAALLSKRAGDRLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 17 | 35 | 19 | - | – | |
| MobiDBLite | 17 | 55 | 39 | - | – | |
| PANTHER | 23 | 223 | 201 | 1.4E-98 | – | |
| PANTHER | 23 | 223 | 201 | 1.4E-98 | – | |
| Gene3D | 62 | 220 | 159 | 1.3E-51 | – | |
| SUPERFAMILY | 63 | 214 | 152 | 9.51E-37 | – | |
| Pfam | 66 | 120 | 55 | 2.9E-12 | ||
| ProSiteProfiles | 70 | 132 | 63 | 13.21 | ||
| CDD | 72 | 213 | 142 | 4.52898E-82 | – | |
| SMART | 75 | 123 | 49 | 8.7E-7 | ||
| Pfam | 160 | 213 | 54 | 1.8E-15 | ||
| ProSiteProfiles | 164 | 223 | 60 | 15.165 | ||
| SMART | 167 | 215 | 49 | 3.6E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0077100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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