Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0081000.3

Overview

Field Value
Gene ID LotjaGi4g1v0081000
Transcript ID LotjaGi4g1v0081000.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Sulfate transporter, putative; TAIR: AT1G23090.1 sulfate transporter 91; Swiss-Prot: sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3; TrEMBL-Plants: tr|K7L351|K7L351_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0081000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:10548960..10555939) extracted from Lotus japonicus Gifu genome v1.2.

GATGAGCCTAATAATGCCTGCACCATGCATTCTTCACATTGCATAGTAGAAATGGCCATGGAAGTACACCAAGTTGTTCC ACCACCCCACAAGAGCACCTTGCACAAGCTCAAGGCTAGGCTCAAGGAAACGTTCTTCCCTGATGATCCTCTGCGCCAAT TCAAGGGACAAACACTCAAGAACAAACTAGTCCTTGGAGCTCAATATGTGTTCCCTATTCTTCAATGGAGTCCTAGCTAT AGCTTCAAACTCTTCAAATCTGACCTTATTTCTGGTCTCACCATTGCTAGCTTGGCTATCCCACAGGTTCGTCATCAATC TAAAAAATGCACGTTTGAAAATCATTCTACAATTAATTCTAAAAATAAAATCAACTGTGATTAGAAATTTCTTCTGTGGA ATTTGTCATTCAGGGAATCAGTTATGCTAAGCTTGCAGACCTTCCTCCAATTGTGGGACTCTGTGAGTGTGTTGCTTTTT CTTTTTTTACTCTCCATAGCTTGTGCTAATTTGTTTGATCACATGCTTATGGTTGGTTCTTCTGCACATTTTCAGATTCT AGCTTTGTTCCACCACTGATTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTGTTTCAATTGCTTCTCT TGTGATGGGATCCATGCTGAGGCAGGAAGTGTCTCCCACTGGAGATGCAATTCTGTTTCTTCAACTGGCTTTTACTTCAA CCTTCTTTGCTGGTCTTTTTCAAGCTTCTCTTGGAATCCTAAGGTAATTAATTTGCAAAATTTAGGCATGTTTTGCTAGT TTTTCCCCCCAATTTGAAAGTGTTGATGATTAATGCAGGCTAGGATTCATCATTGATTTTCTATCTAAGGCAATCCTCAT TGGGTTCATGGCTGGTGCTGCTATAATTGTCTCACTGCAACAGCTCAAGAGCCTCCTTGGAATCACCCATTTCACTGCAC AGATGGGGTTGATTCCTGTTATGAGTTCTGTTTTTAACAATATACATGAGGTTAATTAATTACTTTTTTTTTCTTTTTAT CTCTCACCGTGACACAAAACACCAAATGGAATTTCTCTTTTGAAAACTTGGTTCTTTAATTTGTGGGACTTTTTTCTGCA GTGGTCCTGGCAAACTATACTGATGGGAATTTGCTTCATGGTGCTGCTATTACTAGCAAGACACGTTGTATGTTATATTC TCACAACTCTTTCTTTTCACTGTTCTGTTCTTACTTCAAATTTTCTATCTTGAATCTTATAGTTTTGTCTCACCCTTGTG TGCATTATTCTATGGTACCATTTTTTCTTTATCTTTTTCAAAAAGGCACTTTAATTAACCTCCAATAAATAGTGAAAAGG CATTGTGGTCCAGAATCACTAGCATATAGTTATCATTATCAAACACCTTGATGCCTCTTCAGTCTTCAGCCTGGGTTTTA CACCTCAAAGGTCACCCTGACAGAGATAATTCATTGCAAACGGTATGATGAACTCGAGGATCATTATTCAGGAAAAATGA AAACTCAAAAATGAAAATCGACTCGGTGGTTGAAATGATGAAGTCAGCCACGGATTGAGGGACCAGAAAATATGAAGATA GTATAAAAACTTTATAGGGAGTGTAAGTAAATAATATTAAAATACTATTTTATTGAAAAAATTAATTTCTCTTGCGAGTG CCTCATTTTCTTACCATCTTCCCAGAAGACCAGGACAGCACTATTAATTGACAAAGAGAAGACAATTTTTAAAAATATAT ATATGTAAATGTAAATTAAATAGTATTATATAAGTATTAATAAACTAACATACAAAAAACTAATATAAATATAAATTCAA TATTAAATTTGGTTTTATTTTCTGAAGCATAAAAAATTATTTAATATATTTTATATTCATGAATTTGAAATGATATTTTA TATTTAAATTAATGGGTAACTTTTCTATGGTGTTGTTGGAAACTGAAAAGTTGAATCCTCTTTTGACTCATATGGAACTT TATTTAATGTGATGTGTCTTTTGATTCACCTATTTTCTCAAAGAGTTTCTTGGGCATTAGTTTTAACACCCCCTATTAAT CCCACACCCTCTTTTATTTTCTAAATTCCCTTAATACCCTCTCTTATAAAGAGATAGTCAAAGTGTGATAGTATTTTCAC ACATACTAAGTGTGAAACATTTTCACACTCAATGTGTGTGAAAATATTTCACACTCACTAAGTGTGAAACACTTAAAATG AAAGGAAGAAGGTGAAGAGAGAATAAAGATACTCAATTCGCACAATTGTGTTTCACACTCAAGGGTGTGAAACACAATTC AGTTTCGCACTCAAGATCAGTAGTGTGAATGGACTTTATTTTCAATTTTAAATTTTTCGTTTCTTTAGAATTAGATTTCA CACTCAAGTGTGTGAAACATTTTCAAATTTCACACTCAAGAGTGTGAGTTATTGAATTGTTAATAATTTTTTAATTTTTT TTTGTTTTTTTATAATTTTCATTTCACACATTTCACACTCTCTTTTCAAATTTCACACTCAAGAGTGTGAAAGAACCAAG TGTTAAGAATTTTATTTTTAATAATTAAATTTCACACTCAAATGTGTGAAACATTTTCAAATTTCACACTCAAGAGTGTG AGTTATTGAACTGTTAATAATTTTATTTTTAAAAAAAAATTGATTTTTTTTATATTTTCATTTCACACTCAAGAGTGTGA AATAATTTCAAATTTCACCCTCAAGAGTGTGAAGGAACCAACTGTTAAGAATGTGAAAATGTTTTCCACTCACTGAGTGT GAAATACTTAAAACGAAAGGAAGAAGGTGAAGAGAGAACGAACATACATCAGTTTACACTTACAATGTATGAAATGTTTT CACATTTATTAAGTGTGAAAAGTGGCAACGAAGAAAACTATGAGATGAGAGTAAAAGTGAAGGGTGGTGTGATAAACAAA AATGATGGTAGTGATAAGATAGGAAAAGAGATATGTTTGGAATGAAATTAAATTTTAAAGGGTATTTCAGATATTTTGGT GCATAAAGAAGGGTGGGAGATTAATTGACGGGGTGTTAAAACTAATGCCGTTCAACTTTTACCAATTTTCTACACTTGGG TTAAAAACAAAATTTGATCATCATGAAAACAAAATGTTAAAATTATTTGATTATAAAATTCTGATAAATGATTCGTAATA TACATTTTTTTACAAAAATATAATAAATTGATAATTTATTAGGTTAAGTTACTTTAAAAAAAACCTTTAAAATTTGGTGG AGACTAACATGAAAAACCTTCTTTTATCACAGGATATTACATATTTACCCTAAAATTAATTTTAAAAAGCAATTATGCCA TAGATGTTATTTTTCCTTTTTACCACTTTACCCTCTTCTTCACCAATGGACCCTAACACCAAGCTCCCCCTACAACCACC ACAATCACCATACCCAACGTTATCCAGAACTGCATCACTGTGTTGGAGCCTCTCTGCACGAAAGATTTCTCCAATACCGT CGACTTCGCATCTACGACGCAGGATCTGTTCCCGGTGGTGCTGGAATTGCTCTTCGAGTCCGTTCGCTGGTGCGTAGTGG GAGTGATGGAAGGTCCCTTTTGGTTTGGGTGAGGGGTTTTCTGGACATTATAACTTTTGGGGTTTTATTTTTATTTTTCT AGACTCTCTTAAAATTGTTATATGAATCTTCTCTGGAATTGTGGATATCAATCATATACACTAAATTATTGTACTGAGAA ATAGTAAAGAATGATGTAGGTGATTTGTTCGCATCTGCACATGATTTTACAATAAATAATCTATATTTCAATTTGGACGA AATCATCATGATGTTTGTCTGTCACATGGGAATATATATCAGTCAGACTCGACTCAGAACAAGCTTGGCTTGATTTTCTT TTTCCAGATTGGCTTGTGGTCGTGGAAAAGGATGACCGATTTTAACAAGTAAAGTGGTAAAATAAAAAGGAATTAGTCCA GAGTTTACTGCAATCATCTATATTCTTATGTTGTTTTTTATACTGAAAGGGCGAGAAGCCCAAGAGTCAGTAAAAAAGAA AGTAGCACAAGGCTACCCAACTAAAGTCTCTCAAAGAATACTCGCCTAGCATCAACCAACATTGCTGATCTAAACTTGAA CATAGTTCTATTATTTAAATAATGTTCACTTGCCAATGATTATGAATAAGGGCTAAGGCCTAAGTGGATGTAAATTTAAG TCTAGACTGCGTTGGCCTTGTCTTTCACTTGACTTTTACTATAGTATTGAATAATGCAGTGTAGTATTGACTAACTTATC CAAATAAATGCATGCAGAGCATAAGGAGACCAAGGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTATGTGTGTCATCATC TCTACTCTTCTGGTTTTTGCAATAAAGGGTCAAAAGCATGGCATCAGTGTAGTAAGTCACTGCTCCCACACCCTCCACAC TATTTGCTTCTTAAATGAAACATCAATGTAGCAGTATTTTGAGCCACTTAGTGCGTGTTTGGAAATTCTTCTATAATTGA TTTTTAAACATAATCAATTTTGGGAAGAAACTTTTATGAGTTGCTTCAGGGTAACATAATTGATTTTGAAAAGAATAAGT TGATCCAAACATGTAATTACATATCACTATCTGCTCAATTACTAAAGAGAAGTAATTACAATGTGTTTCCAGATTGGAAA ATTACAAGAAGGAATAAACCCTCCTTCATGGAATATGTTGCGCTTTCATGGAAGTCATCTTGGTCTCGTCGTGAAAACCG GCATTATCACTGGCATTTTGTCCCTCACTGTAAGTTTAGCATTTTTCTTCTCTGGCTTTCTCCTTTGCTAACTTCTTTTT GTTTAATTTTATTTCATTCTAGTCCTACAGAAAACTTGGAATAATTTTTTTTCATATACATAAAACCAGCAACACCATAA TGAAGTATGCATAGTTGGTCTTATCACTGTTATAACGATGGATCAGTGAAATTTTAAAAAACAGGAAGGTATTGCAGTAG GAAGAACATTTGCTGCACTAGGAAATTACAAAGTGGATGGAAATAAAGAAATGATGGCTATTGGGTTTATGAATGTGGTT GGCTCCTTCACTTCCTGCTATGTTACAACAGGTTCTTGTTTGCAACTTTCAAAAGTCTTTCCTGAAGGCTAATTAAGCAT AAGATTGAGTGATGGTTGAGAAGCACATACTTACCCATTTAAACTATGAATTTGCAGGTGCTTTCTCTCGCTCAGCTGTT AATAACAACGCAGGTGCGAAAACAGCAGTGTCAAATTTAGTGATGTCTGTGACGATCATGGTGACACTCCTTTTTCTGAT GCCGTTGTTCCAATACACGCCTAATGTTGTGTTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATTGATATCCCTG CTGCTTGTTACATTTGGAAGATTGACAAATTCGATTTCCTGGTCATGTTAACTGCTTTCTTGGGTGTTCTTTTCATCTCA GTTCAGAAAGGACTTGCTATTGCAGTAAGTTCCTGGTTTATTCAGTTTTTACTCATAAATGCGAACATCATTATTATGGA GTGAAATCCCCTGTCTCCATTTTGTGTCTCATTCTCTGTCCAAATCAATCGAATTGTGTCACGTGACTCATGTAAGGTTA TAATTACCTTCGTGGCACAATTTGATTGTGGAATAAGGTAAGAGATCAAGTGGAGACAGAGCAAGTAAGAGCTCGTTTGT ATATGAACCAAAAAACACTTATTGGAGCTTATCTACTAAATAAACTCCAATAAGTGCTCTTTATTTTGCATCCAAAAGAG TTCTATAACAAATTGTAGGAGCTCCCTTTGATTGGCAAGGAATGACAATGCTACTGATCAGGTTGGGTTATCAGTTTTAA AGATACTCCTGCAAATTACAAGGCCTAAAACAGTAGTGTTGGGGAAGATACCAGGGACAGAAATATATAGAAATCTTCAT CAATACAACCAAGCTGTAAGAATACCAGGATTTCTTATTTTAAGCATTGAGGCTCCAATCAATTTTGCCAACATCACATA TCTCAATGAGAGGTTAGTTTCTGCAAATCTTATCAAGTATGGAATTTTTGTTTTGGCACATTGATATTATTCTCTTTTTT TTACTCTGACTGCTGATATGTAAAATTAGGACATTACGATGGATTGAGGAAGAAGATAATAAAAAGGAGCCCTTGAACCT TCGATTTTTAATCCTGGAAATGTCAGGTAACTGAGGTTTTGATACAGCAAAGGTGGAATTTCATAGTCTTGATTTCCTGT GAATCATATATCCCTATTGCAGTATGTGATTCAGTTCATTATTGTTAGGAATCACTATTCTAGTGGTAAAACTTATTTGC TAATAAGAAAACCTCAATCAAATTGTTACTGTAATCTAAGGATGTTCTCACCTAGCTGTACACAATTACTTGTAAGACTG CATTTCATACCAAGAAGCTGGTTTGAGCTAATTTCCCTGCACTAATTTCACAATCTATATTCAAGCAAATCACTGAACAT ATTTCACCTACCCTCTAATGAAGAAAACAGTGTCATACAATAAAAACTTTAAGTATCATGTCTCTTTGAAATTTTCAGCT GTGAGCGCCATTGACACAAGTGGAATCTCATTTTTCAAGGAGTTCAAATCAACAATGGAAAAGAAGGGTGTTGAGGCAAG GATTCTAAACCCTGAAATATACTTGATTTATTTACTAAATCTCTATAGTGACTAATTCATTTTAGTTGTGACAGCTTGTG TTGGTGAACCCTCTTGCTGAGGTCATAGAAAAGCTGAAAAAAGCAGATGAAGCTAATGAGTTCATAAGAGAAGATAACCT TTTCTTGACAGTTGGAGAGGCAGTAGCTTCACTTTCATCAGAAATGAAGGGTTAATCAACAACCGCAGAAGAAGCACATA TAGTTGTGTCACATTACTGA 

CDS sequence (LotjaGi4g1v0081000.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCATTCTTCACATTGCATAGTAGAAATGGCCATGGAAGTACACCAAGTTGTTCCACCACCCCACAAGAGCACCTTGCA CAAGCTCAAGGCTAGGCTCAAGGAAACGTTCTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAAACACTCAAGAACA AACTAGTCCTTGGAGCTCAATATGTGTTCCCTATTCTTCAATGGAGTCCTAGCTATAGCTTCAAACTCTTCAAATCTGAC CTTATTTCTGGTCTCACCATTGCTAGCTTGGCTATCCCACAGGGAATCAGTTATGCTAAGCTTGCAGACCTTCCTCCAAT TGTGGGACTCTATTCTAGCTTTGTTCCACCACTGATTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTG TTTCAATTGCTTCTCTTGTGATGGGATCCATGCTGAGGCAGGAAGTGTCTCCCACTGGAGATGCAATTCTGTTTCTTCAA CTGGCTTTTACTTCAACCTTCTTTGCTGGTCTTTTTCAAGCTTCTCTTGGAATCCTAAGGCTAGGATTCATCATTGATTT TCTATCTAAGGCAATCCTCATTGGGTTCATGGCTGGTGCTGCTATAATTGTCTCACTGCAACAGCTCAAGAGCCTCCTTG GAATCACCCATTTCACTGCACAGATGGGGTTGATTCCTGTTATGAGTTCTGTTTTTAACAATATACATGAGAGCATAAGG AGACCAAGGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTATGTGTGTCATCATCTCTACTCTTCTGGTTTTTGCAATAAA GGGTCAAAAGCATGGCATCAGTGTAATTGGAAAATTACAAGAAGGAATAAACCCTCCTTCATGGAATATGTTGCGCTTTC ATGGAAGTCATCTTGGTCTCGTCGTGAAAACCGGCATTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGA AGAACATTTGCTGCACTAGGAAATTACAAAGTGGATGGAAATAAAGAAATGATGGCTATTGGGTTTATGAATGTGGTTGG CTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGCTCAGCTGTTAATAACAACGCAGGTGCGAAAACAGCAG TGTCAAATTTAGTGATGTCTGTGACGATCATGGTGACACTCCTTTTTCTGATGCCGTTGTTCCAATACACGCCTAATGTT GTGTTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATTGATATCCCTGCTGCTTGTTACATTTGGAAGATTGACAA ATTCGATTTCCTGGTCATGTTAACTGCTTTCTTGGGTGTTCTTTTCATCTCAGTTCAGAAAGGACTTGCTATTGCAGTTG GGTTATCAGTTTTAAAGATACTCCTGCAAATTACAAGGCCTAAAACAGTAGTGTTGGGGAAGATACCAGGGACAGAAATA TATAGAAATCTTCATCAATACAACCAAGCTGTAAGAATACCAGGATTTCTTATTTTAAGCATTGAGGCTCCAATCAATTT TGCCAACATCACATATCTCAATGAGAGGACATTACGATGGATTGAGGAAGAAGATAATAAAAAGGAGCCCTTGAACCTTC GATTTTTAATCCTGGAAATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCATTTTTCAAGGAGTTCAAATCAACA ATGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTGAACCCTCTTGCTGAGGTCATAGAAAAGCTGAAAAAAGCAGATGAAGC TAATGAGTTCATAAGAGAAGATAACCTTTTCTTGACAGTTGGAGAGGCAGTAGCTTCACTTTCATCAGAAATGAAGGGTT AA 

Protein sequence (LotjaGi4g1v0081000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MHSSHCIVEMAMEVHQVVPPPHKSTLHKLKARLKETFFPDDPLRQFKGQTLKNKLVLGAQYVFPILQWSPSYSFKLFKSD LISGLTIASLAIPQGISYAKLADLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVMGSMLRQEVSPTGDAILFLQ LAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTAQMGLIPVMSSVFNNIHESIR RPRLFWVSAGAPLMCVIISTLLVFAIKGQKHGISVIGKLQEGINPPSWNMLRFHGSHLGLVVKTGIITGILSLTEGIAVG RTFAALGNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNLVMSVTIMVTLLFLMPLFQYTPNV VLGAIIVTAVIGLIDIPAACYIWKIDKFDFLVMLTAFLGVLFISVQKGLAIAVGLSVLKILLQITRPKTVVLGKIPGTEI YRNLHQYNQAVRIPGFLILSIEAPINFANITYLNERTLRWIEEEDNKKEPLNLRFLILEMSAVSAIDTSGISFFKEFKST MEKKGVELVLVNPLAEVIEKLKKADEANEFIREDNLFLTVGEAVASLSSEMKG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 80 80 -
PANTHER 10 237 228 0.0
PANTHER 10 237 228 0.0
Pfam 77 237 161 7.5E-55
Phobius 81 98 18 -
Phobius 99 103 5 -
Phobius 104 122 19 -
ProSitePatterns 106 127 22 -
Phobius 123 128 6 -
Phobius 129 145 17 -
Phobius 146 156 11 -
TMHMM 156 178 23 -
Phobius 157 179 23 -
Phobius 180 190 11 -
TMHMM 183 205 23 -
Phobius 191 209 19 -
Phobius 210 214 5 -
TMHMM 212 234 23 -
Phobius 215 232 18 -
Phobius 233 243 11 -
PANTHER 236 612 377 0.0
PANTHER 236 612 377 0.0
Pfam 243 435 193 3.1E-55
TMHMM 244 266 23 -
Phobius 244 266 23 -
Phobius 267 336 70 -
TMHMM 297 319 23 -
Phobius 337 360 24 -
TMHMM 339 361 23 -
Phobius 361 371 11 -
Phobius 372 394 23 -
TMHMM 374 396 23 -
Phobius 395 399 5 -
Phobius 400 423 24 -
TMHMM 401 423 23 -
Phobius 424 429 6 -
Phobius 430 458 29 -
TMHMM 430 452 23 -
Phobius 459 613 155 -
Gene3D 466 610 145 4.8E-37
ProSiteProfiles 486 607 122 25.387
CDD 487 600 114 1.3473E-20
Pfam 488 603 116 4.8E-29
SUPERFAMILY 492 607 116 5.49E-14
Coils 574 594 21 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Secondary active sulfate transmembrane transporter activity Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.
Biological process Sulfate transport The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Molecular function Sulfate transmembrane transporter activity Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0081000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…