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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0084400 |
| Transcript ID | LotjaGi4g1v0084400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleoporin GLE1; TAIR: AT1G13120.1 nucleoporin GLE1-like protein; Swiss-Prot: sp|Q0WPZ7|GLE1_ARATH Protein GLE1; TrEMBL-Plants: tr|A0A0L9U9X5|A0A0L9U9X5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0084400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:11065535..11075458) extracted from Lotus japonicus Gifu genome v1.2.
AAACGAGTAAATATTTAATTCTTCCACGTGAAGTAAAATTATCGCAATTACGGTCCAACCAATTTGGGGAGAATCGTAAA ATACAAGTTAAAATAAAAAAAATCACAACCGGTTAAACCGGTTGCTCTTCCTTCACTTGCCTGAACCCTGAACCCCCAAT GCGAATTGCAGCGTCGTCTCCGCCGAAGAAACGATCTGCGCCACCCTCTGTTCTCATCACGTGGCTTCGTCTCCGCCGGA AGGTAGGGTTCTGCTCTCTATCCCTCTGTTCTCATCGTGTGTAGCATCGTTGAACTCTTCTTCGTACTCATACATTTGCA AATGCGGTAATTTATTTTCTTGAATTAACTTGTTATGCCAGAATAATTTTATGGGTTTCAGACAAATGTTGAATCTTTTC ATCTGAAATGAAATAATCTCTGGTTGGTTCTTGCATCTCTAATCTGTAACTGGAAAATGAAGTTAGGTTCTGAGCAAATT CATAACCCTCTTAACTGTTTATATGATCTTGGGTTAGGTATATCTTATAATGCAGATTATTACTTTAAATCTTGATTTGG ATTTTATAATCTTCTGTACTAGTTAATCATATGCAGTTCTAATTCTCACTTTTCTGTTTAATCAAAATAACATTTGCAAC TTATAATTGCATTTTATGTATTTTTTACTTTTCTGTGTTTTTATTTTCTTAAAATTAGGTCAGGTTACATTTTTCTTGGG TCGCCGAAATAGCGAGCAGGGTCGGCTAGACCCACTTTTAGCTCAACAGGCTCACTAGCTCTTAACAAGAAGTCTCTATA TCTTAAAGTATCATTGCCAGTGTTAGACAATGTAAGTTTGTTTTTGTAAGTAAATTTTGAACATTCTGGTGAATGTGTTT CGGTCCAACATTTTCAATTCGCATCCAGAGAAAGGAGTTTGAATTTTCTGTGGTATTTGCAGGGGAGCTGTGAAATTGGA GCTCCATTGTGGTTCGCAAAGAGTGGATGGCATTGTTGTTGATCCTGAACCTGATTGGAGCTTTGATGCTCTTGTCTCAG AACTCAATGCTTTGGAAACGAAACTTGCTACTACTTCTACCAAACCTTCGTCTCTCAATAAAACAACATCCCGGTACTTT GGTTATCTCTTATTTTATTTTTCCAGTTATGTGCATCCTATAGCGGTCAATTTTCATGTTTATTTTTTACGTTTGTCCAG TGGGAATGAAATTGAGAGAGGTAGAACTTTCAAATTGCATGCACATGAATATGAGATGGAAGACACAGAAAGTGAAGACG ATGATGTTAATGATGACAGAGCTTTAGTAGTAGCTGGCAAGCGAATCACTTGTGATGAACTTTATCTAAGGTGCCTCTTT CTTTATTCTAGCTTTATTCACATATTTTAAATCATGGAAATGTTTGAACTCTTTTTTTTAATGAATGTTATCTTTATTTT ATTTCTTCTAATTAGGTAGGAATTGTTTCTGTTTGCTGTTTTATTTGGGGGTAATATTTGCATTTCCTTCGGTGTTTCAG TGACAGTGATGATTCCGATGTTATGTCTGCTTTTGAAGTGCAACCCTACTTGATGGATGAAGTGGAGGAGGTGGAAGGTG CCTTGTTTGAGTTGACCCATGAACACCAGCTTAGGGTTAAGGTTAGTGATTGTATTGATACCAGTGCACTAGTTACACCT ATGACATGTCATTTACAAATTGATTGACTTGTCATTCTTGATCGCCATTTGACGTGTAGTGAATTGCAAAATAAACTCAT GGTTTGTTTTATGCTTTATATAGCAGATCTCTTTTTCTGATATTCCAGATTAACAGGATGAAATAAGGAGTAAGATCTCA GTGTTGGAGTCAGCTCTGGTGAATGAAAGTCAGAACGCTACTTCTTCCCTTCTGCGAGTGGAGAAATATAAAACAACAAG GCAGGAATTGGATAAAAAGTTTGACACGCAATATCAGCGCCGCATGTAAGCTTTCATCTCCCCTCTGGTTTTTTTTTCTT CAGAGCAGTATGGTTTTCCCCTCTCTTATTAGACTATAATGTAGGCAATGAGTATGAACCTCAGGCTGTTCTAATATTGT GTTCACATAAAAATTATTATTTACATGTCAATGCACCGCCATGCATTTGTAGAGATCAATTAAGTATTAATGATCTTTTC CCATTTGTTTGGGCGGGGTGGGGGCAATTAAGTCTTAATAATCTTTTCACAATTCACTTCAAAAAATACTGACGAAAGGA TACGTGATTGGTTTGTTAGTGGGAAGAGAACAAAACATCAATTTTCACTTTATTTAAAAGGCTGAAGAATCTTATTTTAC GTTATTTTATTTTTTTGAATATTGAACTTCTTTGATATTTTGATACTCTCAATTTAATCATTACAAATATGAATTTTCTC TTCTTTTATTCTTTTGTTAGATAATTGCTTTGATTGCACTAGTTGAAAACGAAGGAACTGATGTTTGACCACCCCTGTTT TTTTGTAGTGCAGAAGAACTTGATAATCACTTGACAGCTGTTCAACAGGACCGTGAACGTAGATCACAGATAGAGGAAAG GAAAATAAGAAATGATGCAGCCAATGAAGAGGCCAAGAGAAAGATTGCTTTGCAGGAGGAAAAGAAGCAGCAAGAAAAGG CTAAAGCTGAAGCAGAGGTTATATTTTTTATCTTTTAGTTGTTTGTGACTATCTTTTAATTGATTGTGTTATTTGGCAAA AAATATTTGAATATGATTTCATTTGATCAGCTGTTTACAACAGCAAATCAATTTTTTATGTTAAATATTGGGTTACTTTT TTCTTTTATGGTTTTTCATATCAATGTTTAGAGAGTCCTCAACATTCACAAATAAATTTATTGTTCAATTGGTTTGGATT ATGCTTGTCCCCTTGACCTTCTACTAGCCTACAACTTGTTAATAATTCACTTATATTCATGTGTCCTCCACTAAATGGGT CTTGTTAGTTTATGAATATATTTTTGTTGCCAATCTTCTTTGTAAAAGCTTGAGCTTAAATGACCATTCATTCATTATTT TTAATTTTGTGGGTGCAGGCCAAACTTAGAGCTGAAGAAGCAAAACAAGCTGCATTGGAAGCTGAGAGAAAAGCGGTAAT GGAAACCAAAAGAAAGGCAGCAATGGAAGCTGAAAAAAGAGCGGAAAAGGAAACCATAGGAAATTCAGAAAGGGTTACTT CTGGAGCGACCCAACAAGAAGCTGCTGGGCGTCCAACAGATTCTGCATCAAGCCTATCCAATGTGGAAACCAAGAAATCT GGTACAGGTTTGCCCTTTTCACTTTCTTTCACATTTTGAACAGTGCCACTTTTCTTGTTTACTCGCTTGTCCAGATCTAA TAGTGCTTCGGCTTCCATTTAGTTGAAAAATAATTGTTCCTCTCAATATTTCTAGACTAGTGAAATTAGTTTTCTTCATC GTTGTATAATTAATATTGATTTGATGAAGGTATTTGCATAAGTTTGGTGTCATTTGCGATGGTTAAATCTTCTATTTTGT CTCCAGTCACCACATTGTTAAGCACAAAAGTTCCCTCTCATACACAGTTTTTCTTTTCTTTTCTTTTTTCCTTAAAATTC TTTGTTATCCTTGTTCTTGGTTTGACTGCTTTGTCGTTGAAAAATTATTGAAGTGCTGAACCACTTCTTATAGATGCATT GCGAGGCTTTGGTCCAATTGGTGCTAATTGATATGTGCGTGCGGGTGTATTACCTTGCATGGAGGGGCCAAAATTAAATA TTAAAATAATTCATATTTTGTAATAGGTATTCTAAGGACATCCGAAACATTTTGTCAAGATTGTTGATTTATTTCCTGTT TTGTGACGGATTTGGTCCTGATTTGTTACCCTCTAATTATGTTAATTAGGTGCATTTTTTTTTGTAATTAGGTTTGTTAA TTGTTTCTTTAAGTAGGCTTGTTACTGCCTATATATATTGTTATCATCCATTTAATATTTAATTAAGCAATAACATCATT CAGTCTTCTTCTTTCAAGTTGGTATTGTAGCTCCCGGTCCAGGTGGCTCTGCTTCTGCACCTGAACCATAGTCGTTTTAA TTATGGCTCCAGTTAGATTGTTTTATCAACTGAGTTTTCAACTGGCCTATACAATCTTTAGGTAATGTGTGTCAAGCTGC TGCAAGTGCTTTAAATCTAGAGCATGGGAGGCTACAGAAACTGACTGAGCTATATGAGAGAAACCAATTGATAAGATCAA GTTCTAATAAGGTATTGTTGAAAATAGATATTGGAGATGTTTATCTGATGAGACTCGATTCATCTTCCTTTATGCAATAA GCAATACGAGTTATTTGTTGATTTGATTTTTTCTTTTATATTGTTATCATATTTTTATTGAATTTTGTTCTAGATAATAT ATTGTATATTTTTATGGTTTTTGTAAGCAGCTTCATATCTGATGCTTGGCATATCTGCTATACTGTTTTATCCTGCAAGA AATTTGCTTGTGTCCTTCATCTCACTTTGAAGACTAGCTTTCCTAGTTGCACACACTGATGCTGGTGTTGTGACTTGTTT GTGTCGATATTTTTTCAGGATTATACCCGCCATGAGAATCATATTTTCCGGAATATAAAGACAATTAGGGGCAGTAGAGA CAGTGTGAGGTGAGGTCAATATTTAATTTGACTATTGCAGTATTGCATAATGCTGTTTATCAACGTATCATTCTTATCAT TTTGAAATTTTTAAAGGGACAGTTTTATGTCCTATCTAATCCTGTTGCTACTGTTTAATAATGTTTCAACCTGCCAAAAA ACACAAGAATATCTGTATGAAGTAGATTCTATTTCAAGGATTTTATTTCAAGCAAATGCAATCCTAATCCGTATTCAGGA TATTAGCTGTGCCCACCTATTTACTCTTGTTGGTATTCTGTAGATCAAAAGCAAGTGATTTGATTAAACTTTTGAATGAT CCTCAATATCCTCAATCAATCAGCGTGGAGACATTTGCTAAAAAGGTATCTTCACATTATTGGATTCCCTTGTTATATAG TTTCTTTGTCCTTTATTGTAGATGTTATATTTGCATCAATTAGTAGCATATGGAGGTAACTAAGGGGACAATATAAAAAC CATTCTTATAGAAGTTTTATCTTGTTCATGACATTGTGTAGAGCCTGTGACCAAGTAGTTTGGAGATCCTCGCCATCCCA AATCTTCTCCTAAACATTGTTGATTTTCAACAAGATAAGTGAAACTAAAGCCCAACAGTCTCTCGAGGGGCATGATAGAG ATATATTATAAAGTCATTCATATATCTTCGCCTTGCCTTTTAAACTTTTGAGATAGCTGATTCATGAAAGTATACAACAA CTAAATTATGATCATAGATAGCAGTGCGGAGTGGTTGATGACATAACTGCTAAGTGGGGTAGTGTGTACCGATATACTGA AGACTGTAATATTTAGTTAAAAAAAATTCCATACATAATATACATACTCAAGAATAAAACAATTACATAAAATAAAAGAT ATATTCATAATTAGTAATAAGTTCATACTATTAAGCTATATACAGAAGGTAATAACCACAAAAAGCCAAGAATTAAATTA GTTCAAGTCTACAAGTGAATGATACCATGGTTGCCGAATATGAAGGGTAAAAAACATGGGTAAAATATTGTTAGGACCCA ATTGCAAGGTATGGGACTTGAGTCCCACATTGGAAGTATGAGATTCTAATGTGGGGTTTATAGGGCCTTGGGCTCTTCAA CTACAACAGCTGCTTTTGTGGTATGGTTCTCCCAAGGTTTTTATCAATTGGTATCAAAGCCTTCCACCATGTCTCTCAGC TGCAAACGAGCGGCGCGGGTGGTAACACCGGCATTGCAGTTTTTGCTCGGGACTAGTCAAAGGGCTAGTGCACAGCCAGC CCGCATGGGCACCGGGGCTGCGGAGCGTGGTGGAATTTTAGGAACCCAATTGCAAGGTATGGGGCTTGAGTCCCACATTA GAAGTATGGGATTCTAATTTGGGGCTTATAAGGCCTTGGGCTCTCCAACTACAACATCTAGCTTTTGTGGTATGGTTCTC CCAAGGTTCTTATCAATTGGTAACAGAGCCTTCCATCATGTCTCTCAGCTGCAAATGAGCGGGCACGGGCAGTGATGTCA GCATTGCACTGTTCGTCCGGGACTAGTCAAGGGGCTACTGCACAGCCAGCCCGCGTGGGCGCCAGGGCTGGAGTGTGGTG GGATGTTAGGACCCATTTGCAAGGTATGGGACTTGAGTCCCACATCCCACATTGGAAGTATGGGATTCTAATGTGGGCAT TGCTCTCCCAAGGTTTTTATCAAAAATGTTTTTCGTCCCTGTAATATTGACGCTCTTCAAGTCATAATAAAAATTCTGCA ATTGGCTGAAAACAATATCAGTGAGCACTTGGTGTTGGTGATTTGTGTCCTAACAGAAGGGAAAGCAGTGGGTGTTGCGT GAGTAAAGCTTCAAACAAGGTTTCAAACCCCAAAGGCTTTTCTGGTGAAAAAAACGGTCAAAACGCAAATAACCCTAAAT AATTGGTTGACAACTCAAAAAAAAAAGGTGGGGGGGGGGGGATTTTACCCAGTTTCAGAATGGCGGTTGCTACAGTCGTT AATTGCCATGATTTGGGGCAAAATCACAGATGCAATAGACATGATGTTAAAACACTCGCAATGCAACTTCCATAGCAGGT ACTTGACGTGATGCCATGATAAGGAGGATTGATAACACTGATTGTTTTTAGCCCATGTAAAACCTTTTTGTTTTAAATTC TTAATAAAAAAAATCTGATGCATTTTTCTGTGATATCATTTTCATTATTTATCAAATTTGAAAATGACTGGAATGTTGTG AGGAAATGAATATTTGTAAAGTGAGAAATATGCTGCAACTACATTATAAAAAAAAAATTAATGTTAAGCAAACTAGTGTA TGTAAAATATTTTTTAATCAAAGTAACATGTGGCCGAAATCAATGTCATTGGCTTCAAATGTTCAATACGAGGAACAGAA ACTAGTTAGAAATGTTGAATTTGCTTACTTGCCTATGGTTGTTAGTGAATGAATTAGTTGTGACAATTGACAACATACTC TACAGGTTGTTTCAAACGCTAAAGCTCCTGGTAGTGCTCCTTTTGCAAGTGCCTATGTCATTGTTCTTGTTACATCTCAG GTATATGTTTAATCTCTAGCCTCTGGGATTAGTTAGGAGGATGGTATAGAATTAGACTTTCAAGGAAGCATAGAATGAGC ATAAATTTTTTTTTTCAATAATTATTTATTTTCTTTTCACAGGTCCCACATGCAATGGATATTTTGCTAGCTGAGCTTCA CAGGGTGTGCCCATACACTGTCCCAAAACATATGGTTTACAAAAAGGTAACTTTGTTCAACTTGAAAACATTACCCAGTC ATTTGTTTTTGTTCAATTTCTCAACTTGGTATTAAGGAGGAGATTGTGGTATTGTTGTGTTGATTTTCTTTTGCTCCATA AATTTCGTTATTACTCCCTTTTTATGTCACATTTTTCCTAAATAAGAGGTTTTAGCTTGTTTTAGTGATATAAGAGAAGC AATATGTTTCTGCATTAACTGCCACGGTTTAAATATGTTTGTGCTAAATCTTCAGGCTTCACTACATCCAATATTTCAAC TCACGTTGTATAATATTAATTATGCCTAGAGGGTACTTATTTACACTGATAATATGCTCACACATGTTAAACCCACTGTA TCTTAGAAAAACAAATAAAGCAAACCATCGAATAATAACTGCATTGTAATAAATTCATTGCCTTCAATATTCTAGCAAAC TTCTCAAATTATTCTATAAATTCATGTACACTGCCTTCTTGTTTCAATGCAACAAATGGACTTAAAGCTACTGTTGGTTA GAATCTTTTAAGAATTGCACTCTTGAATTCTTCCCAACTCAATTTCTGATTGCAAGCTTCCCACCATTCAAACCAACTCA TTGCCTTGCCATCCAGACCCACCATAACCGCTTGAATATTTTCCCCCTCCACAGCTCCTTTAATTCAAAATTACTTCTCC AACTTGTTCACCCAGCTAAAAGCATCTTGATCTCCATAAAAAACAGAAATATTTAATTTCCTCCATGTCTCCCGAAATTC ACTTTTCTGTTTCAGATTCCCTCCACAAACCTTCAGCTCCTGTATGCTCCGCTTCACCTGCTACGCCACCCTTGGATCCT CTCCAAGCCTTCACATAACTGTTTCCATTAAAATCTACAGCCAATTCAACTAACTCACACTAAGGGTGCTGGGTTATTTT CCCCTACTTCTCTCTAACATTTACTTTCATAGATCGTAGTGATAAGGGGTCGAACCCTATTAGTATATATCAATGAACTC AAAGCAACCTTTAAATACGAACCCTAGCTTATAAAAATTATGAATTATCACTTGAAAGACCAATTTTTTCCTTCAATGGT TGGTGTTTCATGGTCGAGTTTTAGGAATTATTGCAGGAAAAACAAAGTAGGAGGGAATGACACTCACTGAAGAGTGGGTG AGGGAAAGGGTCGAATGGGAGGGGTTTAGACTTAGCGGGGTTGGGTGGTTTGCTTTTTCTTTTACTAGGTGTGATGGTTT TTTTTTAAAGATAGTTTGTTTCATGTGTGTTCTTCGCATATAATTTTAACACGGGTTACTTACCCTGTTGATTGTGTTGT TAATTACTTGATTTTGCCCCTCTCAGTCTACCTTTCAATCAAAAGAGGCATACTTCAAAAGCATCGGTTATTGGGAAGAA AATGGAAAAATGGAGAGTACAGAAGATTATTTACAGAGGTTAGAATCCTATGTGAAGATGTATGCTGCACTGGTTCAGGT CTGTCATGGCTGTCTCAAATTTGTGACAGATTACATGTTTGCAGTTTTTCCCCTACTGTTTCTCACTGCTGATCTCATCT GATGAACTGACCTTGCTTGTTTTAACAGACTGAGATTCCTAAGGTTCAAAATTTGCATGGCTTACAACATGGTTGGGCAT GGCTTGCGAGGTTCTTGAATTCTCTTCCAGCCAATCAATATACAGCTGTTTCGCTCGATGCATTCTTGCGAGTAAGTAAT GTAAAATGTTGTGGTGTTTTATTGCATTTGCAAGTAATGTAAAATGTTGTGGTGTTTTATTAACTAACTAATTCTCTTTT CAGATGGCTGGATTCGCTCTTTTTAGAAGATATAAATCTCAATTCTTAAAGATGTTGAACACCATCTCAGAGAACTTTTT AGTTGATCTGAAATCACGAAATGCACCAGAATTGAGAAAGACTATTGCGGAGATACAGACTTATATAGAAGATAAGATGT TCCTTCAAGAGCCAGAAGGAAGGAGCCTGCAAACTAATTTGTTATCGAAGGAATGTGTTGTTCGTTGAAGATTGAATATC ATCTTTCGTGTATCTGTTACGTCATTTTTGGTGTATTTTATATCTGATGAGAAGTAAGTTATAATATTATCCCATTCTTC CAAAGTAGTTACTATGTTGAATAGTTTTATTCACACCTCCCGATAGGTGAATATTGAATGAGAAGAGAGATAGATAGAAA ATAGAGGTGTAATAGAAGTAAGAGTGTGAATGAATCATAGCTCTTACTATGTTATGTTTGATTTTGTTATTGTTGTAAAA ACTGGATTGGCTGGTCACCGATTGAATCAAGGAGGGAGCTACTTACCCTCATAATATGGTATGAATTTCCCTATTCTTTT AATGGTATAAATATTAGTATAACATGTTACAAGTAACATATTCTATGTATTGCTTCCACCAAAATTTTATCTTATTACTT ATAATGATATCAATTACTTTTTCCATTCCCCTTCATATGGTAACTCATCTTTTTGCACTGGTCTATTCTCTGTCTATTTT CTAA
CDS sequence (LotjaGi4g1v0084400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCTGTGAAATTGGAGCTCCATTGTGGTTCGCAAAGAGTGGATGGCATTGTTGTTGATCCTGAACCTGATTGGAG CTTTGATGCTCTTGTCTCAGAACTCAATGCTTTGGAAACGAAACTTGCTACTACTTCTACCAAACCTTCGTCTCTCAATA AAACAACATCCCGTGGGAATGAAATTGAGAGAGGTAGAACTTTCAAATTGCATGCACATGAATATGAGATGGAAGACACA GAAAGTGAAGACGATGATGTTAATGATGACAGAGCTTTAGTAGTAGCTGGCAAGCGAATCACTTGTGATGAACTTTATCT AAGTGACAGTGATGATTCCGATGTTATGTCTGCTTTTGAAGTGCAACCCTACTTGATGGATGAAGTGGAGGAGGTGGAAG GTGCCTTGTTTGAGTTGACCCATGAACACCAGCTTAGGGTTAAGGATGAAATAAGGAGTAAGATCTCAGTGTTGGAGTCA GCTCTGGTGAATGAAAGTCAGAACGCTACTTCTTCCCTTCTGCGAGTGGAGAAATATAAAACAACAAGGCAGGAATTGGA TAAAAAGTTTGACACGCAATATCAGCGCCGCATTGCAGAAGAACTTGATAATCACTTGACAGCTGTTCAACAGGACCGTG AACGTAGATCACAGATAGAGGAAAGGAAAATAAGAAATGATGCAGCCAATGAAGAGGCCAAGAGAAAGATTGCTTTGCAG GAGGAAAAGAAGCAGCAAGAAAAGGCTAAAGCTGAAGCAGAGGCCAAACTTAGAGCTGAAGAAGCAAAACAAGCTGCATT GGAAGCTGAGAGAAAAGCGGTAATGGAAACCAAAAGAAAGGCAGCAATGGAAGCTGAAAAAAGAGCGGAAAAGGAAACCA TAGGAAATTCAGAAAGGGTTACTTCTGGAGCGACCCAACAAGAAGCTGCTGGGCGTCCAACAGATTCTGCATCAAGCCTA TCCAATGTGGAAACCAAGAAATCTGGTAATGTGTGTCAAGCTGCTGCAAGTGCTTTAAATCTAGAGCATGGGAGGCTACA GAAACTGACTGAGCTATATGAGAGAAACCAATTGATAAGATCAAGTTCTAATAAGGATTATACCCGCCATGAGAATCATA TTTTCCGGAATATAAAGACAATTAGGGGCAGTAGAGACAGTGTGAGATCAAAAGCAAGTGATTTGATTAAACTTTTGAAT GATCCTCAATATCCTCAATCAATCAGCGTGGAGACATTTGCTAAAAAGGTTGTTTCAAACGCTAAAGCTCCTGGTAGTGC TCCTTTTGCAAGTGCCTATGTCATTGTTCTTGTTACATCTCAGGTCCCACATGCAATGGATATTTTGCTAGCTGAGCTTC ACAGGGTGTGCCCATACACTGTCCCAAAACATATGGTTTACAAAAAGTCTACCTTTCAATCAAAAGAGGCATACTTCAAA AGCATCGGTTATTGGGAAGAAAATGGAAAAATGGAGAGTACAGAAGATTATTTACAGAGGTTAGAATCCTATGTGAAGAT GTATGCTGCACTGGTTCAGACTGAGATTCCTAAGGTTCAAAATTTGCATGGCTTACAACATGGTTGGGCATGGCTTGCGA GGTTCTTGAATTCTCTTCCAGCCAATCAATATACAGCTGTTTCGCTCGATGCATTCTTGCGAATGGCTGGATTCGCTCTT TTTAGAAGATATAAATCTCAATTCTTAAAGATGTTGAACACCATCTCAGAGAACTTTTTAGTTGATCTGAAATCACGAAA TGCACCAGAATTGAGAAAGACTATTGCGGAGATACAGACTTATATAGAAGATAAGATGTTCCTTCAAGAGCCAGAAGGAA GGAGCCTGCAAACTAATTTGTTATCGAAGGAATGTGTTGTTCGTTGA
Protein sequence (LotjaGi4g1v0084400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAVKLELHCGSQRVDGIVVDPEPDWSFDALVSELNALETKLATTSTKPSSLNKTTSRGNEIERGRTFKLHAHEYEMEDT ESEDDDVNDDRALVVAGKRITCDELYLSDSDDSDVMSAFEVQPYLMDEVEEVEGALFELTHEHQLRVKDEIRSKISVLES ALVNESQNATSSLLRVEKYKTTRQELDKKFDTQYQRRIAEELDNHLTAVQQDRERRSQIEERKIRNDAANEEAKRKIALQ EEKKQQEKAKAEAEAKLRAEEAKQAALEAERKAVMETKRKAAMEAEKRAEKETIGNSERVTSGATQQEAAGRPTDSASSL SNVETKKSGNVCQAAASALNLEHGRLQKLTELYERNQLIRSSSNKDYTRHENHIFRNIKTIRGSRDSVRSKASDLIKLLN DPQYPQSISVETFAKKVVSNAKAPGSAPFASAYVIVLVTSQVPHAMDILLAELHRVCPYTVPKHMVYKKSTFQSKEAYFK SIGYWEENGKMESTEDYLQRLESYVKMYAALVQTEIPKVQNLHGLQHGWAWLARFLNSLPANQYTAVSLDAFLRMAGFAL FRRYKSQFLKMLNTISENFLVDLKSRNAPELRKTIAEIQTYIEDKMFLQEPEGRSLQTNLLSKECVVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 543 | 543 | - | – | |
| PANTHER | 25 | 622 | 598 | 4.2E-159 | ||
| MobiDBLite | 208 | 227 | 20 | - | – | |
| Coils | 228 | 292 | 65 | - | – | |
| MobiDBLite | 278 | 295 | 18 | - | – | |
| MobiDBLite | 278 | 323 | 46 | - | – | |
| MobiDBLite | 296 | 323 | 28 | - | – | |
| Gene3D | 345 | 606 | 262 | 1.5E-39 | ||
| Pfam | 360 | 575 | 216 | 1.9E-51 | ||
| Phobius | 544 | 561 | 18 | - | – | |
| Phobius | 562 | 628 | 67 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nuclear pore | Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined. | ||
| Biological process | Poly(A)+ mRNA export from nucleus | The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm. |
Expression pattern of LotjaGi4g1v0084400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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