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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0087800 |
| Transcript ID | LotjaGi4g1v0087800.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein, putative; TAIR: AT1G26480.1 general regulatory factor 12; Swiss-Prot: sp|Q9C5W6|14312_ARATH 14-3-3-like protein GF14 iota; TrEMBL-Plants: tr|I3S2S9|I3S2S9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0087800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:11652535..11654753) extracted from Lotus japonicus Gifu genome v1.2.
GTGGCATTTAATTTCTCTTAGGTTAGCTTGTGTTTGTTTTGATGTTCCCTGAATTAACCTTCATATATATTATGCAGAAA TGGTTGAGTGCATGAAGGCTGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATAT AAAAATGTGATTGGTGCAAGGAGAGCCTCGTGGCGCATTATGTCTTCGATTGAACAGAAGGAAGAGTCAAAGGGAAATGA GAGCAATGTGAAACTGATCAAGGGTTACTGCCACAAAGTAGAGGAGGAACTGTCTAAGATTTGCATTGACATTCTGACAA TTATCGACCAGCATCTGATTCCTTCTTCCGCTTCAGGAGAAGCCACCGTTTTCTACTATAAGATGTGAGTCATGTTGTAA TTAGTACTCTTATGGCATTTTCTTTGTTAATTCAATTTATCTGCTTTATTGAATAGTTGCTTCCTTTGGATAGATATTTT CCCCATTTTGAATATAATATGAAAGATGCATGCTATGAGAGATAAAAGATAATGCAAAAATATATTGTGGGTTTGTTCTA TTTTAATTTATTGATTATTAAGAAACAAAAGGTAGCAGAACATTCTACTTATTCGTAATAGCATGATATATATATATATA TATATATATATATATATATATATATTGGTTGTTTGAAAATCTTCCGTGCAGAAATAATGAGAACAAAAGGAAAATTTAAG ACTGCAGAAGGCTATAACTACTGAGCAATAGAGCATCTTATTAATAAGACAAAGGGTTGAATTGCACACAAAAAAAAATG CAACTTGATATTAGACAAGTGCTTAAGAAATCAAATTAATTCTACAATCAGAAGCTACTCACCTTCTTCCCAGAATTGAT TTTTAACTTCAGAGTCAATTGATGAAGGATTTCCAAACATGTTACTCTGACTTTTATTTTCCTAAAATACAACAAAAAGA AACTGACTACAATTTTAGTAGCTTTCCCATCAGCAATATCTCTTGCTAGTTTTCACATGCTTTGATTCTCTGTTTGATTT CCTTCAGCTTCATTTTGATCCAGGAAAGGTGATTATTATCGTTATCTTGCTGAGTTCAAGACCGACCAAGAGAGGAAGGA GGCAGCTGAGCAGTCACTAAAGGCATATGAGGTTAGTGCCTGGCCTCTCTCATTTCAACACTGAATTGATTCACATGGGA ATATATGATATCTTGTGTTCATCTTTAGTATATGGTGCTCTTGCTTGATGTACAAAACAATTTCTGTTAACAGGCTGCTT CAGCCACTGCAAACACAGATCTTCCTTCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTAT GAGATAATGAACTCACCTGAAAGGTAACTCTCTATTCTGGCACTTTGGCCAAACTCAAATGTACAGGATTTGGAGGAGTA CTTGGCTTAGCGTGACTGTTACTTTTTCAACAAAAAGTGCATCAGATGGATTAATATCCCACTTTCATACTTTCTAATGA TTAACCAAACAGACTCTAAGGCTTACCATGACTTAGGAGTTTATTTTAACGTCTCCGTTTTCCACTCATAACACCAAAAT TTGCTTTATGAAATTATTTTATAGTAATAATTGTATTTGAAAAATTAAATGCCGGTACGAAGGGTGGTGAGAGTAGAAAA AGGTATGTTAAAAGAAATGTCCTAAGTCATGCCAAGCCTTAGTCCATGGAACTGCTTTTTGCACATCGTTTTTAGTTTTG CTATTTTTGCCTACTCCAATCTTATTTTTATTTTTTAACTTAAGGAGATTGGGACATGCAAATAGTAAAAAAGGGTGTGT CTTGGTCAATCCAATTTTATAACCCATCATTCTTTTAAAATGTAGGATTTTCTCACTTACACATCACACTCACATGTGCT TAAAAGAATTCTTTTTGTTTGCATTGGTCCAATCAAATTGCTTTTGTTGTTAGCTCTGGTTTTAATGTTAATACTGAAAC ATGCAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCGATTGCTGAGTTAGACACCTTGAGTGAAGAGTCATACA AGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTTACTCTCTGGACCTCTGATTTACCTGAGGATGGAGGTACG CTCATGATTGACACTTGATATAAGGTTCATTGTGGTTGTGCCCTGCTAAATACCTATAA
CDS sequence (LotjaGi4g1v0087800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGAGTGCATGAAGGCTGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATA TAAAAATGTGATTGGTGCAAGGAGAGCCTCGTGGCGCATTATGTCTTCGATTGAACAGAAGGAAGAGTCAAAGGGAAATG AGAGCAATGTGAAACTGATCAAGGGTTACTGCCACAAAGTAGAGGAGGAACTGTCTAAGATTTGCATTGACATTCTGACA ATTATCGACCAGCATCTGATTCCTTCTTCCGCTTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAAGGTGATTATTA TCGTTATCTTGCTGAGTTCAAGACCGACCAAGAGAGGAAGGAGGCAGCTGAGCAGTCACTAAAGGCATATGAGGCTGCTT CAGCCACTGCAAACACAGATCTTCCTTCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTAT GAGATAATGAACTCACCTGAAAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCGATTGCTGAGTTAGACACCTT GAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTTACTCTCTGGACCTCTGATTTAC CTGAGGATGGAGGTACGCTCATGATTGACACTTGA
Protein sequence (LotjaGi4g1v0087800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVECMKAVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVKLIKGYCHKVEEELSKICIDILT IIDQHLIPSSASGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKAYEAASATANTDLPSTHPIRLGLALNFSVFYY EIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGTLMIDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 220 | 220 | 1.8E-113 | ||
| PANTHER | 1 | 220 | 220 | 2.5E-148 | – | |
| PANTHER | 1 | 220 | 220 | 2.5E-148 | ||
| PIRSF | 1 | 220 | 220 | 1.8E-109 | ||
| Pfam | 1 | 210 | 210 | 7.9E-99 | ||
| SMART | 1 | 223 | 223 | 5.9E-148 | ||
| SUPERFAMILY | 2 | 217 | 216 | 7.72E-97 | ||
| PRINTS | 14 | 43 | 30 | 1.6E-81 | ||
| ProSitePatterns | 20 | 30 | 11 | - | ||
| PRINTS | 63 | 87 | 25 | 1.6E-81 | ||
| PRINTS | 94 | 116 | 23 | 1.6E-81 | ||
| Coils | 113 | 140 | 28 | - | – | |
| PRINTS | 129 | 155 | 27 | 1.6E-81 | ||
| PRINTS | 156 | 182 | 27 | 1.6E-81 | ||
| Coils | 170 | 190 | 21 | - | – | |
| PRINTS | 183 | 212 | 30 | 1.6E-81 | ||
| ProSitePatterns | 192 | 211 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0087800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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