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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0087800 |
| Transcript ID | LotjaGi4g1v0087800.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein; TAIR: AT1G22300.3 general regulatory factor 10; Swiss-Prot: sp|P48347|14310_ARATH 14-3-3-like protein GF14 epsilon; TrEMBL-Plants: tr|A0A0K9RR93|A0A0K9RR93_SPIOL Uncharacterized protein; Found in the gene: LotjaGi4g1v0087800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:11652545..11655334) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCGCGGAGAAGGAGAGAGAGACGCAGGTTTACATGGCCAAGCTTTCTGAGCAGGCTGAAAGATATGAAGGTTCCTT TTTCCCTTTATTATTGCAATGCACACCTTGATCCATGGTTAGATTTAGGGTTTTGAATCGCTGTCGCGGTTGTGGTTGCG TTACGAAATTACAGTCAAATGCAGGTTGAAGCGACCGCAAAATCGGTTGCGATGCAGCCAAAATTGCGGTTACCGACCGC AATTTAGAACCCTGGTTAGATTGATAATGATATGTTGCGTTACGGAATTACAGTCAAATGCAGGTTGAAGGGACCGCAAA ATTGGCTGTGATGCAGCCAAAATTGCGGTTGCGGACTGCAATTTAGAACCCTGGTTAGATTGATAATGATATTGATATGT TGCGTTTGGGTGCAATCCCAAGGTGTGGATATATTACAAACTGCAAAAAATGAATAATGTAACAAAGGAATGATACCAAC AGAAAAGTCAGCACAAAAAAACAATGTGTTAATTTTTTTTAAAATAGATTTATGATATAGAGCATATTGGAAAAAATGTC AGAAATGTGTGTTGGTACGTGGTGGCATTTAATTTCTCTTAGGTTAGCTTGTGTTTGTTTTGATGTTCCCTGAATTAACC TTCATATATATTATGCAGAAATGGTTGAGTGCATGAAGGCTGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAGAGAGG AACCTCCTCTCAGTGGGATATAAAAATGTGATTGGTGCAAGGAGAGCCTCGTGGCGCATTATGTCTTCGATTGAACAGAA GGAAGAGTCAAAGGGAAATGAGAGCAATGTGAAACTGATCAAGGGTTACTGCCACAAAGTAGAGGAGGAACTGTCTAAGA TTTGCATTGACATTCTGACAATTATCGACCAGCATCTGATTCCTTCTTCCGCTTCAGGAGAAGCCACCGTTTTCTACTAT AAGATGTGAGTCATGTTGTAATTAGTACTCTTATGGCATTTTCTTTGTTAATTCAATTTATCTGCTTTATTGAATAGTTG CTTCCTTTGGATAGATATTTTCCCCATTTTGAATATAATATGAAAGATGCATGCTATGAGAGATAAAAGATAATGCAAAA ATATATTGTGGGTTTGTTCTATTTTAATTTATTGATTATTAAGAAACAAAAGGTAGCAGAACATTCTACTTATTCGTAAT AGCATGATATATATATATATATATATATATATATATATATATATATTGGTTGTTTGAAAATCTTCCGTGCAGAAATAATG AGAACAAAAGGAAAATTTAAGACTGCAGAAGGCTATAACTACTGAGCAATAGAGCATCTTATTAATAAGACAAAGGGTTG AATTGCACACAAAAAAAAATGCAACTTGATATTAGACAAGTGCTTAAGAAATCAAATTAATTCTACAATCAGAAGCTACT CACCTTCTTCCCAGAATTGATTTTTAACTTCAGAGTCAATTGATGAAGGATTTCCAAACATGTTACTCTGACTTTTATTT TCCTAAAATACAACAAAAAGAAACTGACTACAATTTTAGTAGCTTTCCCATCAGCAATATCTCTTGCTAGTTTTCACATG CTTTGATTCTCTGTTTGATTTCCTTCAGCTTCATTTTGATCCAGGAAAGGTGATTATTATCGTTATCTTGCTGAGTTCAA GACCGACCAAGAGAGGAAGGAGGCAGCTGAGCAGTCACTAAAGGCATATGAGGTTAGTGCCTGGCCTCTCTCATTTCAAC ACTGAATTGATTCACATGGGAATATATGATATCTTGTGTTCATCTTTAGTATATGGTGCTCTTGCTTGATGTACAAAACA ATTTCTGTTAACAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCTTCAACACATCCAATCCGTCTTGGACTTGCACTC AACTTCTCAGTCTTCTATTATGAGATAATGAACTCACCTGAAAGGTAACTCTCTATTCTGGCACTTTGGCCAAACTCAAA TGTACAGGATTTGGAGGAGTACTTGGCTTAGCGTGACTGTTACTTTTTCAACAAAAAGTGCATCAGATGGATTAATATCC CACTTTCATACTTTCTAATGATTAACCAAACAGACTCTAAGGCTTACCATGACTTAGGAGTTTATTTTAACGTCTCCGTT TTCCACTCATAACACCAAAATTTGCTTTATGAAATTATTTTATAGTAATAATTGTATTTGAAAAATTAAATGCCGGTACG AAGGGTGGTGAGAGTAGAAAAAGGTATGTTAAAAGAAATGTCCTAAGTCATGCCAAGCCTTAGTCCATGGAACTGCTTTT TGCACATCGTTTTTAGTTTTGCTATTTTTGCCTACTCCAATCTTATTTTTATTTTTTAACTTAAGGAGATTGGGACATGC AAATAGTAAAAAAGGGTGTGTCTTGGTCAATCCAATTTTATAACCCATCATTCTTTTAAAATGTAGGATTTTCTCACTTA CACATCACACTCACATGTGCTTAAAAGAATTCTTTTTGTTTGCATTGGTCCAATCAAATTGCTTTTGTTGTTAGCTCTGG TTTTAATGTTAATACTGAAACATGCAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCGATTGCTGAGTTAGACA CCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTTACTCTCTGGACCTCTGAT TTACCTGAGGATGGAGGTACGCTCATGATTGACACTTGATATAAGGTTCATTGTGGTTGTGCCCTGCTAA
CDS sequence (LotjaGi4g1v0087800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCGGAGAAGGAGAGAGAGACGCAGGTTTACATGGCCAAGCTTTCTGAGCAGGCTGAAAGATATGAAGAAATGGT TGAGTGCATGAAGGCTGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAAAA ATGTGATTGGTGCAAGGAGAGCCTCGTGGCGCATTATGTCTTCGATTGAACAGAAGGAAGAGTCAAAGGGAAATGAGAGC AATGTGAAACTGATCAAGGGTTACTGCCACAAAGCTGCTTCAGCCACTGCAAACACAGATCTTCCTTCAACACATCCAAT CCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCACCTGAAAGGGCCTGTCATTTGGCTA AACAAGCTTTCGATGAGGCGATTGCTGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAG TTGTTGAGAGACAACCTTACTCTCTGGACCTCTGATTTACCTGAGGATGGAGGTACGCTCATGATTGACACTTGA
Protein sequence (LotjaGi4g1v0087800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAEKERETQVYMAKLSEQAERYEEMVECMKAVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNES NVKLIKGYCHKAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQ LLRDNLTLWTSDLPEDGGTLMIDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 91 | 89 | 1.2E-36 | ||
| PANTHER | 3 | 91 | 89 | 3.9E-107 | – | |
| PANTHER | 3 | 91 | 89 | 3.9E-107 | ||
| SUPERFAMILY | 6 | 172 | 167 | 3.4E-69 | ||
| SMART | 7 | 183 | 177 | 1.5E-99 | ||
| Coils | 13 | 33 | 21 | - | – | |
| Pfam | 13 | 93 | 81 | 6.3E-28 | ||
| ProSitePatterns | 45 | 55 | 11 | - | ||
| Pfam | 91 | 170 | 80 | 2.5E-39 | ||
| PANTHER | 91 | 180 | 90 | 3.9E-107 | – | |
| PANTHER | 91 | 180 | 90 | 3.9E-107 | ||
| Gene3D | 92 | 180 | 89 | 6.1E-45 | ||
| Coils | 130 | 150 | 21 | - | – | |
| ProSitePatterns | 152 | 171 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0087800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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