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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0094400 |
| Transcript ID | LotjaGi4g1v0094400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyl hydrolase family 43 protein; TAIR: AT5G67540.1 Arabinanase/levansucrase/invertase; Swiss-Prot: sp|A9ZND1|XLOA_VIBSX Xylan 1,3-beta-xylosidase; TrEMBL-Plants: tr|K7MLY0|K7MLY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0094400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12670417..12676923) extracted from Lotus japonicus Gifu genome v1.2.
TAGCGAAGCATAAAGATGAGTTGCAACAAGCACAGACTACACAAGTTTCACCACATATATAGAGTCTGATTGACAATCCA CAAAGCGTCAACCCCAACCCCAAGCAACGGTCAAGGCATGAAAAATTGCAAGCAACTCAAGATGTAAAACACAAGAATCA TCTAGGAAGTCATAGAACCCACCAAGCCATTGCCCTGAGTTACTGCTGAAACAACCCCCAAAACCTCCCCTTTTCGGATT CCCACATTCACTACGATACAGTTGAGCAACGTTGGAGACCAAGCCACCAACCGAGGGGAATGCGGAGACTCACCAATACC AGCAAACACTTTTAGCAAGTCGGATTCCATGACAACAACATTAGCACAAATACATTAAATCACATCTTTTTATTTTCCAT TTTAAATATTTAAAATGGAAAAGCAGGGCACGGTTTATTTTTTAGATAAGCAGGGCACGTGAGTCCATAGTCCATTCCTT CTTCCTCCTCTGCCTTAGTCAGCTCAGGCAAGCAGTTCCATGCCATGAATGCTCGATGGCTTGGTGCCGGAGAAGCCGTG GAGGTTCATGTTTTGGTTGGCGCCGTTAAAGTAAAGAATAAGGCAGTTGAATTTGCTTCTAGCAATATAAGGAAGCCATG GACGTTTTTCAACTTCCTCCATTGTCGTCTTGCTGGTGCAGCAGGAACACCAAAGAATGGAGGAGCCACGTGCGTTCTGT GTTTTTTAATATATATTTTTTCTAACATGTTCAGTCGTTAAGTTTGTGCTATTCAAGAAGCACCGACCCAGATCCAAAAT CAACTATCTTTCGTTTTCTCATGTTGGGTAGTTTTGCTAATTTCATAGTTCGGATTGTACCAGGTGAGTGTTTTGCCCTT AACTTTGCTTTCAGTTCTCATAATTCGACACTGTTTGTTTATTTCTTATATTTTCCATGGAGGAACCACTCTGAACTAGT GAACTCTACACTAGAGGTTGAACTTTTTTATAGAAAAAATTTAACTTCTACTGTGAAACCACTGCAGCTTGATCAACTGA GAAAACCCTTTTCACCTTCTTAGTTTTAAAATTGTTAAAGTAATGATTATCATATATGTTTGAATTCTGAAATAATAAGT GAGTAGCAAGATAGTGTTTTGAGAGAGGGGTGATTTGTGGGATACACTTGCCTTTTAGGGCTGTTTATAGTTTAATCTTT CAATGAAGATACATGTCACCAATCACACCATTTTAGGGGTAAAAGTAGATAATGTTCATTGCACAGCAAGAGGACATAGG CCAATTATGCAATATTTTACTGTCACCATTTTCGGGGTTTTCCATAAATCCTTTCCCTAAACTAATTCTGTCAAAAATAA AATGCAATCATGTTCTCTTCAGTCTTCTCTATCATATAAATTAGATAGTGTTTATGAGCTGAGCCTATGGCTTCTGTCTG ATAGGTTTCAGGTTTCCAAAGGTTGCATTTTGTTAAGTGCAATTCGCAGCATTGTTCTGAAGATAAAAGAGGAAGGGAGC ATAGGATGAGAACCCTGTACAGGAATCCAACTGCTTCACCTTGGAATCCAGGGAGTAGATATTGCTCTACTTGGACTGTG ATATGGAGCTTCTTGGGATGCCTACTTTTGCTTCATCTATATTCAAGTGTCCACCGCGAACATGGGGAAGGTGGAGAGGT CAAATTGCATGCGAGTATTCATCATCATCCTCAGCTCCATGAACTCCAACAAGTGGAAAATGAGAAATTCCAAATTCCCC CTGCAAAGAGGAAGAGGTCCCCTCAGGGAGGGAAACACGGGCCTAAGCGGATAACCCCATTGGTTGATGAATTCTTGGAT GAACATTCCCAAGTGAGACATGTTTTCTTTCCCGGTAAAAGAAGTGCTATAGATCCAATGAAGGCTATGGGAAACGATAG TTATTACTATTATCCCGGGAGAATTTGGTTGGATACTGATGGAAATCCTATTCAAGCCCATGGAGGGGGCATTATATATG ATGAAAAATCAAGCATGTACTATTGGTATGGTGAATATAAAGATGGACCTACCTACCATGCTCGTGATAAAGGAGCTGCT CGGGTAAGTCATTTAGTTGAAAGATTTATTGTTTTAACCGTAAGTGTTGTGATGGCTACAAGAGTTTATTTAGCTTTATC TATTTCAATAAATTTATGTAATGGTTACCAACGACTAGCTTCTTTTTTATGTTGGTGCAAGTTTCATGTGGTTGCATTTT TGCTTCTTAAAAAGAAAAGGCAATAAGAAGAAGATGGTTTCCTTGTAAGGAAAAAACTGACTAGATTAGAGATGCACCAT TTCTTGTATATCTGCACTAATCCTTCTTTACCCCTAGCTAGCTATCTAAATTCTAGACATGTTTAACTCATTTTTTACCA TTGTTTGACAAGGGACCTTGTAATGCAAAATGTAAATCCATTATGAGAAACTCCTATGTCTATATCTTGAGTTTGGAACT TTCTTAGTAGCAACATAACCATTTTTCATTAAAGTCTTTGACAGAGAAATTGCATTTGTTTTGTTTCCCAAGTACATACA AGAACACTATGAGTGTGTCGCACTAACCTTGAGTCTTGATGTATAGTGTACGCTAACTGACGAAGTACTGATCATTCTGC CTTACCGTGCTCGGGGGGCTTTTGCTTCAAGCCATATAGTGCTTTTCTCTGTCTTAGAACTTTATATTCATTATCTTTGC ACACGAGTCTGTGTGGCTTCTCCACGTAGATCCCTTCTTGAAGCACATTGTTGAGAAAGGCAAATTTGACACTTAGTAGA TGCTCCTCCTTTTTTATGCTGCAAAAGCTATGAAAGCCCTTATTGTATCAAGATGAGCAACTTGCTGTGACTAACCCTTA ACTACTAACCTTGCCTTGTGCTTTTGGATAGTGCCATCAGGTTTGAGGTTTGTTTTATTGACCCACTTAACTCCAATGAT ATCTTTTCTTGTGGACGATCGACTATATCCCATGTGTTGTTTTTCTTAATCATGTTTATCTCTTCCATTACCTTGACCCA TCCTTCCTGCTTTGATGCTGCTTCGAAGCTTTCAGGCTCAAGTATGACCAAGTTGTAGGTTTCATATATATCCACCAATG AACTTGCTTGTTTAGTTGCAGACTCTGGTAAAGAAACTTGTTGTCATGGAGGTGAAAAAAGGATCACCTGGTACTTTTGC TACTTTGTCAGCTTCTTCTTGAGGTAGTTATGTTGGGATAAAGATGTGTTTCCCCCCTTCTCTTCGTTCCAAGTCAGTTT CAACATCTCGAGTAATGGTGAGCTTCTTAGTTTGCAGGTTGTAAACTTGGTAGCCTTTAGATTGCGTGTTGTATTCTGTA TTGAATGTCATGTTTGAGATACAGAGAATAGCTCTTATAAAGAAGAGCTATGTGACCAAAGCTTACATGAGAAGCTAAAC CAATTATCTAATTAACTAACAATTAGTTAGAACTATCTCTAACATACTTTAACAGCTATAGGCAGCTGTCACAACTGGCA TAACTAATTACTCGGTCACAAGAGAAAGAAATACAATGTAAACTAACCCATGCTAATGAAAACAAGTTACACGATGCATG CATAGATGAAATTCTCAAATAATACACTTATTGGTGGTTGAAGCTTGGGTGGCATAGAAAAGATGCTGCTCACTGCCATG CTCTTATACGAAATTACCTTGATGCCTATTTTTGTTGTGAGTTTTAACGATTCTTCTGTCCATGTGCCCAAATCTTGTAG TGTTTACATTGTGGCTTTCTACGGTACCCAAAATCTTTGTCCATGTGATCTAGCCTCTTGTATATCCACACAAAGGATTT TTATTTTTACTGTTTCAGGAGAAATTTCTAGAAAATATATATTTTTCTAGACTTTCCAATATAATTATGCTTTCCTCCAT CTCCTTTATTATGAGATTGAAATTTGAGCTTTGATTGGAAGACATTTTCAATGGTCTCTTCATCATGCCTACACAATCTT TGCTCATATGCTTCAAGAGAGCTTATTAATTCTGCCACAGACAGAGTAGACAGATCTTTAGTTTCCTCAATTGTTATCAC AATTGGGTCAAACTTTTGAGGCATAGTAGTTAAAAATTTCTCAACAATTTTCTTGTCAAGAATATTTTCTCCAAAAGCTC TCATTTGATTTGCTATTTCTTTTATCTTAGAATAGTAGTCCTTAATAGTCTCAGACTCATTCATCTTCAATAATTCAAAA TCTCGTCTCAAACTCTGAAGTTCAATGGCAGTATGGCACGCACCTTGTCATAGTCCTTGATAGTTTCAGACTTCTTCATC TTCAATAATTCAAAATCCCGTCTCAGATTAATACTACCTGCCTTGTCACTTGCTCGAAACTCCTCTTGTAAAGTGCTCCA CACATCTTTAATTAGCACTTCTAGCTCTCATTATTCTTGGAAAAATTGCATCTGTCACCGCTTGTTGGAGAGTAAATAAT GCCTTTGAATCTTTCTGCTTATTTTCCTTCAACTCTTTTCTTTGCGCTGCAGTAAGAGTTGAAATGTCTTCGGGAGTAGC AAATCCTTCATTCTATAATATCCCACAAATCTTGAGAACACAAATATGTCCTCATCTTTACACTCCAGAAATCATAATTT TTACCACTAATAATAGGGATAGTGATCGATGATAGTCGAACAACGTTAGCCATGAAGAAATATTTTTGGGGTGGTTTAAA ATACAAGGAGAATTCTTGAAAGTAGTTAGGATAATTATAAAATAGTTGGTGGGAATATAACTAGGATTAGTGTGTAACCA AAGGTAACTTGATCGCTGACAGTATTGGGTAATGGGTATTAGTTTTTATGGCTTATACTTCTAAGAAATAATTTGACAGG TATGGCAAATATTGGAAGAATTGGATTTCGGAAGCTGAAAACCCCGTATGGTTTTATATGATACTATAGTGTGGGTACAA TACTTTTAGTTTTTGATTTGCTGGATATCAAATGCAATGATGGCCTATTTATAAGCATTCACCACCGCCATGGGTAAGGT AGTTTATTAGTATTAAAAAATTATTAGATCAATCCAGAAACATGATACATCATGAAGTTTTTTTAATCCTTGTACAACTT CTATGAAATTCTAGAAAGTTGCATCACTTTCCAGCAGCTTTCATTTAATTTCTGGTTATAGTGGTGATGTTACTTATTAC CATGTTATGGGCATATTCCTTACTTTCATAATAATCTAATCTTCCAGTAGCTTTTCAATCAACCATGCATATCTACTCAG CTGCATATCCTTGTGAGAAAACTTTATTCTTTAACTGTCTCTCTCTCTCATTAGGTGGACATCATAGGAGTTAGTTGCTA TTCTTCTAAGGATTTGTGGACCTGGAAATATGAGGGTATTGTACTAGCAGCTGAGCCAACAAATGAGACCCATGATCTGC ACAAGTCCAATGTGCTTGAGAGGCCAAAAGTGATCTACAATGAGAAGACCAGAAAGTATGTGATGTTGATGCATGTTGAC AATGCCAATTACACAAAAGCCTCTGTTGGCATCGCAGTTAGTGACAGACCTTATGGTCCATTTGAATATCTCGGTAGCGA AAGGCCCCACGGATATGAAAGCAGGGACATGACAGTTTTCAAAGATGAAGATGGTGTGGCATATCTAATCTACTCCTCTG AAGGAAACAATGTGATGCACATTGGTCCCTTAGCTGAAGATTATCTCAATGTAACATCTGTCATGAAAAGGGTTTTTGTG GGACAGCGCAGAGAAGCACCAGCTATGTTCAAGTACAAAGGAACATATTACATGATCACATCAGGGTGCACTGGTTGGGC TCCAAATGAGGCACTTGCTCATGCTGCTGAGTCAATTTTTGGGCCTTGGGAAACCATTGGAAATCCATGCATTGGAGGGA ACAAAATGTTTAGAGTCGCTACTTTCCTTGCTCAGAGTAGTTTTGTGCTTCCACTCCCTCAGTTTCCTGGTTCGTTTATT TTCATGGCGGATAGATGGAATCCTGTTCAGTTAAGAGACTCAAGATATGTGTGGTTGCCTTTGATAGTGGCTGGAACTGG ACCTGCTGATGAATACAGTTCTGGATTCCCATTATGGTCAAGAGTTTCTATCTATTGGCATAGGAGATGGAAACTGCCTC AGGGATGGAGCACATTCAAATGATGTAGTTTCATGGATGTATTTTACAATTTCTAGTAACTTTTGTAGAAATATCACAAT AATTGGATATATGGTTGATTTTTATTATGTTTGCTATAGCTTGTGTTCATTTTTAGAAAATATTTATATTCTCTTTTGGC TTAATATTTGTTTTGATATTAATTTTATGTGGTACTATAGATGTATATTTTCCTATGGTTTTTAAAAATCGTACTGTCAT TACTCATATTGGTGTGGTATTGTATTTATGTCCATCTTGTGTGATTTTTTGTTGGTCATGTAAAAATTCACCATATATTT GATCTTTTGGCTTACTAGACTCACAAG
CDS sequence (LotjaGi4g1v0094400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAACCCTGTACAGGAATCCAACTGCTTCACCTTGGAATCCAGGGAGTAGATATTGCTCTACTTGGACTGTGATATG GAGCTTCTTGGGATGCCTACTTTTGCTTCATCTATATTCAAGTGTCCACCGCGAACATGGGGAAGGTGGAGAGGTCAAAT TGCATGCGAGTATTCATCATCATCCTCAGCTCCATGAACTCCAACAAGTGGAAAATGAGAAATTCCAAATTCCCCCTGCA AAGAGGAAGAGGTCCCCTCAGGGAGGGAAACACGGGCCTAAGCGGATAACCCCATTGGTTGATGAATTCTTGGATGAACA TTCCCAAGTGAGACATGTTTTCTTTCCCGGTAAAAGAAGTGCTATAGATCCAATGAAGGCTATGGGAAACGATAGTTATT ACTATTATCCCGGGAGAATTTGGTTGGATACTGATGGAAATCCTATTCAAGCCCATGGAGGGGGCATTATATATGATGAA AAATCAAGCATGTACTATTGGTATGGTGAATATAAAGATGGACCTACCTACCATGCTCGTGATAAAGGAGCTGCTCGGGT GGACATCATAGGAGTTAGTTGCTATTCTTCTAAGGATTTGTGGACCTGGAAATATGAGGGTATTGTACTAGCAGCTGAGC CAACAAATGAGACCCATGATCTGCACAAGTCCAATGTGCTTGAGAGGCCAAAAGTGATCTACAATGAGAAGACCAGAAAG TATGTGATGTTGATGCATGTTGACAATGCCAATTACACAAAAGCCTCTGTTGGCATCGCAGTTAGTGACAGACCTTATGG TCCATTTGAATATCTCGGTAGCGAAAGGCCCCACGGATATGAAAGCAGGGACATGACAGTTTTCAAAGATGAAGATGGTG TGGCATATCTAATCTACTCCTCTGAAGGAAACAATGTGATGCACATTGGTCCCTTAGCTGAAGATTATCTCAATGTAACA TCTGTCATGAAAAGGGTTTTTGTGGGACAGCGCAGAGAAGCACCAGCTATGTTCAAGTACAAAGGAACATATTACATGAT CACATCAGGGTGCACTGGTTGGGCTCCAAATGAGGCACTTGCTCATGCTGCTGAGTCAATTTTTGGGCCTTGGGAAACCA TTGGAAATCCATGCATTGGAGGGAACAAAATGTTTAGAGTCGCTACTTTCCTTGCTCAGAGTAGTTTTGTGCTTCCACTC CCTCAGTTTCCTGGTTCGTTTATTTTCATGGCGGATAGATGGAATCCTGTTCAGTTAAGAGACTCAAGATATGTGTGGTT GCCTTTGATAGTGGCTGGAACTGGACCTGCTGATGAATACAGTTCTGGATTCCCATTATGGTCAAGAGTTTCTATCTATT GGCATAGGAGATGGAAACTGCCTCAGGGATGGAGCACATTCAAATGA
Protein sequence (LotjaGi4g1v0094400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRTLYRNPTASPWNPGSRYCSTWTVIWSFLGCLLLLHLYSSVHREHGEGGEVKLHASIHHHPQLHELQQVENEKFQIPPA KRKRSPQGGKHGPKRITPLVDEFLDEHSQVRHVFFPGKRSAIDPMKAMGNDSYYYYPGRIWLDTDGNPIQAHGGGIIYDE KSSMYYWYGEYKDGPTYHARDKGAARVDIIGVSCYSSKDLWTWKYEGIVLAAEPTNETHDLHKSNVLERPKVIYNEKTRK YVMLMHVDNANYTKASVGIAVSDRPYGPFEYLGSERPHGYESRDMTVFKDEDGVAYLIYSSEGNNVMHIGPLAEDYLNVT SVMKRVFVGQRREAPAMFKYKGTYYMITSGCTGWAPNEALAHAAESIFGPWETIGNPCIGGNKMFRVATFLAQSSFVLPL PQFPGSFIFMADRWNPVQLRDSRYVWLPLIVAGTGPADEYSSGFPLWSRVSIYWHRRWKLPQGWSTFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 467 | 467 | 2.2E-272 | – | |
| ProSiteProfiles | 1 | 32 | 32 | 6.0 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 467 | 467 | 2.2E-272 | – | |
| Phobius | 20 | 39 | 20 | - | – | |
| Phobius | 40 | 468 | 429 | - | – | |
| Gene3D | 120 | 443 | 324 | 2.3E-97 | ||
| SUPERFAMILY | 147 | 432 | 286 | 2.86E-53 | ||
| CDD | 149 | 429 | 281 | 2.79791E-158 | – | |
| Pfam | 190 | 373 | 184 | 8.6E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0094400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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