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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0108600 |
| Transcript ID | LotjaGi4g1v0108600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G66880.1 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3; Swiss-Prot: sp|Q39193|SRK2I_ARATH Serine/threonine-protein kinase SRK2I; TrEMBL-Plants: tr|A0A1D6Y9D0|A0A1D6Y9D0_9FABA Open stomata 1; Found in the gene: LotjaGi4g1v0108600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:15395801..15401203) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAAAACACGAATTCCAATATGCGAATGTGAAAGTGACTCCTAGGTTCCGTTTGATTGAAAGTATTTTCAAATTGATC TCAACTGAAATCCTAACACACCCTAACTCTTTCACACACAACTTTCATCATCACCGGTCACTACAAACCTTTTTTTCTTT CATCTTTGCACATTATCCTTCCATCTAACTAACAAACAAAAAAGAGAGAGAAAGGAAAAAAAAAACCAACTTGCTAAACG AGTAGGTTGCAAAACCAAAAAGAGTAAGACGACAAGATTGCTTACGAGTGCAGCAGCAGAACCCACAGAACAAAACGTCG CCGTTGGTTTCACCAATTTGCAGTAGTTGCTTCCGTTCCAACCCAATCCAGTTCAATTCAACCCCAAATTTATCTCTCCC TTTCCCTCACCAAACAAACACCATTTCTATTTTCTCACACACACACACACACAGAAAAAAAGTCTTCTCTTCTCTTCTCT TTCCTTCTCTTTCCCCTATCACCACTCACTCCCACTCAACCGGAAAACGATGCCGTATTACCCGGTCACCGTCTAACTAA CTCAAGCCGCCGCTCAAGAACAAACTCAGTCACCGTCGCCGCCGTCGTTGTTGGTTATTTCTTCCTCCGGTTCGGGTTTT CTTGATGGATCGGGCGGCGATGACGGTTGGACCAGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGG TTCGCGATATCGGGTCCGGGAACTTCGGCGTGGCGAGGCTGATGCAGGATAAGCAAACCAAGGAGCTCGTTGCCGTCAAG TATATCGAACGCGGTGATAAGGTTGAACTTGTTTCCTTTGTTCTCTCTGTTGCCTCTAATTTTGGTAAATTTTTCCTTGT TCACTTTTCGGTGATGGAAAAGTAAAGGGAAATTAAATTTATCACATGATCGTTTTGGCTTTAATTGCTGTGTTGGGTGA GTTTTGGTCGTTGATGAGGTCACGTGTGATGCTATTTATAGAAAAAATTTGAGTTTCTATATTTGTTGCAGTACTTGCTA GGACTGGTCTGTTAATTTTTGCAAAAATGTTTTTATTTTATTTTTATTTTCGTTTTTAATTTAATAAATAATCTCTTTGT TAGTAGATTGCTGTGATTGATGAGTTTGATTTATGAGGGGAAATAGGTTCAAGGGTGTTTTATTTATTGAAGGGTTACTG GTTTTGGTCATTTAAGTTGGGTTTGAATAACAACTGAGTTTGAGTAACAAATGAGTGTACCAGTGTTGTTAATTGCGGAC CGTGCGGAAAATAGCAGAAAGCCAAAAATCCGCTATTTCAAGCCCCGGAAAATAGCGGATAGCGGTGAGCCCTCAGAGTG CTCCAATATAGTGCCGCGATATCCGCTATTTGACAACATCGAATGTAAGTGAACGGATTTTCATTCTAATTCACAAAAAG AGTTCCCTTGACATTTTTTGTCTTGAAATTTGTGTTAATATCTGTTTGAACTGATTCCGTATATCCAAACATAGTTTTAC TCATTTCGTGTTTCAATTGGTGGATGGCAGTGTGGTTTAAGTTAATTTTTGGTTTAGAGATTCACAATCGAATTGCAATG AACTGTGGTTTCTTAGGTGAAGCTTTATCATGCAGTGTTTGTTGTCATTTTTCCTTGGAACCTTTGTACTATGACTGATG GATTGCTGGACTTGTCTATTTTTCTATCTTGTTATTGTGTGTTACAGATTGATGAAAATGTCAAGAGAGAAATCATTAAT CACAGATCTCTGAGACACCCCAACATTGTTAGGTTTAAGGAGGTTAGTATATCTTTTAATATCTCTACATCTTATCTGTA CAGCAGAAGAGTAATCACATGTATTACATTTCACTCAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATAT GCTTCTGGTGGAGAACTTTTCGAGCGAATCTGCAATGCTGGGCGTTTTACCGAAGACGAGGTTGTCATTAATTTGTTTAC TTTGTCTGTACCTGTCATCCACTGAAAGAATGTATTTGCACTTATAATCTGTGACCTATGTAACTTGGTGACCTGTTGTT ACGATGCAGGCTCGATTCTTCTTTCAACAACTCATATCTGGTGTCAGCTATTGCCATGCAATGGTAATTGAACCTTTCCC CTTCTCCACTGTCTGATTTAAATTTTGTTTTCCCCACACTGAAATGTAGGTAATGTTCAGTCAATTGATCATTCTATTTG ACGTTTCTGTATTCTATGTCTCTTCATGAAGCAAGTATGTCACCGGGACCTGAAGTTGGAAAATACTTTGCTGGATGGGA GCCCGACTCCTCGTTTGAAGATATGTGATTTTGGGTACTCAAAGGTGAGTTAGTTCATGGTGTTAGTTCCATGTTTGTTA CTTGAATTTCTTTCAAGAAGTGGTCAAAATAATTATTTCCCCTAAATAATCTGATCCAAACACATACTAGTTACTTGAAT TTTACTGTCCTTTTGATTCATCGATTCAACTATCCTGTAGATTCAAAGCCCTTAAATATATCAACACTCATCATTGTGTT TTAATTGCTTTTATCTAAGTTTTTTTAGATCGTTTTTATATCCTGCTATCTGATTGATAATTTGACATTGTTATTTGCAG TCTTCAGTGCTTCATTCACAACCAAAATCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTATTGAAACAAGA GTATGATGGCAAGGTAAACTATTTAGTTTCATGGTATTGCTCTTTCTCTGTAAAAGATTACAGTCACATTTAATTTAATG AAGGAAGTTGTTGTCAACTAGTTAAAATTTGTCAGCTGGTGTCTTCTTGAATGTTTGTGCTATAAGGTACTAAAACTCTG CTATTTTAATAGTCATTTTGTTCTCTTCCAACCCAATGGTCATTTTGGTCTCCAGTCCAAATAAAATTCTTTTCTCGTTG TCATTTCCATGTAATTCATTTAGTTGACACCTTACATATCATGTATGTTATCATTAAGAAAATGGAAGGTAATTTGCATC CTGATCTTTTTTTGCTTAAAAAGTTCGTGAGAGGTTTTTTATTTTGTTTTGGTAGATCAATAAAAATATTAAGTTCTAAA TATAAGAAAGTAGTGAAATTTTGTTTTTATGTTTTCGTGTATTTAATATCAGATTGCAGATGTCTGGTCATGTGGAGTAA CCTTATATGTAATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGATTTCCGGAAGACAATTCAGGTA GATCAGATTGTATATTTGCTCATTTTCTTCATGAGTGGTCTCTGATTGCTTGAGCATAACTTATTGTGGTTGCTATCTTG CAGAGAGTTCTGAGTGTCCAGTATTCCATTCCAGACTTTGTTCAAATATCTCCAGAGTGTCGCCACCTTATATCCAGGAT CTTTGTTTTTGACCCTGCAGAGGTAATTTCTATTTCAAATAACTGACCTAATTCTGCATGCCTAAATTTGACACTCTACA TCTGAGTAATTATAGGTTCTTCAAATGCAGTTTTGTATACTACCACTTGAGTGTCCTCTTAGAAGCTATTTATCTCACAC TATTTGAGAGCTCATGTGATATCACATGAAATGGATATTTACAATTTGAAGGGCTTTTGACATAATTTTGGGCATTTTGC TTTTCTAAAGAAGTTTCACTCAATTTGTTGTAATATATTACATTTTATGTCTTGCTAGGTTGTATGTTATCATGTAGTAT ATGAATATATTACAGGCAGAGCTGCATCTGTTATTATAGAATATGATAACTGAAAACAGGACAAAATATTGAATACATAT TGTGAGCCTATTGAGTGTTTGCAATGTAGGGATTTAACTTCTATTCGGCTATTCAAAATCATTTAGATCGTGTTTGGATT CAGTGAAGAAAGCATTTATTAGAGCTTATCTTCTAGAAAAAATACTGGATAAGCTCCAATATGTGCTCTTTGGTCTGCAT ACAAACAGGCTCTTATTTGAATCTTATGCATTTGGACATTTATGTGACAGAGAATCACAATGCCTGAAATCTGGAAACAT GAATGGTTTCGGAAGAAGCTCCCTGCTGACCTGATGGATGAGAGGATAATGAGTAACCAATTTGAAGAGCCAGACCAACC CATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACCATACCAGCTGCTGGGGCCTGTTCTTTAGACAAGT TTATGATGGATAACATTGACATGGATGACGACTTTGACGAATTGGATTCTGAATCGGAGCTTGATATAGATAGCAGTGGG GAGATAGTGTATGCCATATACTAATTTAATTATCGTCAGCGCATGAAAGACATCATCTTAATGTTGGGAGTGATGCCATT TTCAGCATCAAGAAAAGAGAGATGTGTGGTCCCTGCATTTTCGGTAGATTCGCATGGATAATACAAAGAAGTTCTTCATG TTAGTTTATATGTTCACTGCTTCTTGGAGATTCCAGCGTCCTCACCATTTATCAGTATCACCTTTGGTGTTGTTTCTGTT GTGGGGTTGAGATGTTTCTTACATTCTAGAAGGGTTGGTGGCTGTGGGAAGAAATAGTTTTTATCCTTCCCTCACTTGCT GGTGAATACTTGCTTTATAGTTTATATATTATATTTACATTAGCTTTTTGTTGTCTTGTGGCTAGAATTGTGTTTCATGT CCCTCTGCTTATATGCACATACTCCATGTAAAAAGTTTCCAGTGGACATAATTGTTACATTTGCTAGTATATGTGTTTGT AATTTGGTATCTTGTGTTGTAGCATATTTCATATTTCATTCATGCATACCATTTCGATCTATTTTGCTCTCTTCTGATGG CACATAGTGCTGTACGTGTTCGCTGTCTCGGTGCAATTCACTATAGGTATTAATGTTGCAAATTTCATTTGCCAAACATT ACAGAAGTTCTAAATTCTAATTGAGGCTTTGGTGTTATTCCTAACTCAAGGTGACTCGTCTGCTCTGCATCCATTTTAGT TTTTTACTCTTCTAAATTGTATTCCACTACTAATTGCAAGTTGAGCGTCAAGAATGCGGCTTCATAATTAGCTTTGAAGG GGAGAAACCAACCTCAGGGGCCAAGCCCTCCAACCTTCTCATGTCGAAACCATCCATTCATCCATATGAGAAGAAGCAAT GTTAATATGTTATCTATTGGTATTTTGAAATGGGAAACAAGATATTGGCAAATATCTTTTCCACAGTCCAAGTGAATTTG CAACCAAAATAGATACTTCTTCAGTACGTTTGCTAAGAAAACACACTACAAATAAGCCTTGATGACCTCACTTTAGCAAC TTTTTCCTGGTGGTTAAGGAGTAGCCTATCAATTTCATTCCTT
CDS sequence (LotjaGi4g1v0108600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCGGGCGGCGATGACGGTTGGACCAGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGGTTCG CGATATCGGGTCCGGGAACTTCGGCGTGGCGAGGCTGATGCAGGATAAGCAAACCAAGGAGCTCGTTGCCGTCAAGTATA TCGAACGCGGTGATAAGATTGATGAAAATGTCAAGAGAGAAATCATTAATCACAGATCTCTGAGACACCCCAACATTGTT AGGTTTAAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGTGGAGAACTTTTCGAGCG AATCTGCAATGCTGGGCGTTTTACCGAAGACGAGGCTCGATTCTTCTTTCAACAACTCATATCTGGTGTCAGCTATTGCC ATGCAATGCAAGTATGTCACCGGGACCTGAAGTTGGAAAATACTTTGCTGGATGGGAGCCCGACTCCTCGTTTGAAGATA TGTGATTTTGGGTACTCAAAGTCTTCAGTGCTTCATTCACAACCAAAATCAACTGTGGGAACTCCTGCATATATTGCTCC AGAAGTATTATTGAAACAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTAATGCTAG TGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGATTTCCGGAAGACAATTCAGAGAGTTCTGAGTGTCCAGTAT TCCATTCCAGACTTTGTTCAAATATCTCCAGAGTGTCGCCACCTTATATCCAGGATCTTTGTTTTTGACCCTGCAGAGAG AATCACAATGCCTGAAATCTGGAAACATGAATGGTTTCGGAAGAAGCTCCCTGCTGACCTGATGGATGAGAGGATAATGA GTAACCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACCATACCA GCTGCTGGGGCCTGTTCTTTAGACAAGTTTATGATGGATAACATTGACATGGATGACGACTTTGACGAATTGGATTCTGA ATCGGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATACTAA
Protein sequence (LotjaGi4g1v0108600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRAAMTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIV RFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPTPRLKI CDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRVLSVQY SIPDFVQISPECRHLISRIFVFDPAERITMPEIWKHEWFRKKLPADLMDERIMSNQFEEPDQPMQSIDTIMQIISEATIP AAGACSLDKFMMDNIDMDDDFDELDSESELDIDSSGEIVYAIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 98 | 98 | 3.5E-37 | – | |
| PANTHER | 8 | 357 | 350 | 1.7E-218 | – | |
| PANTHER | 8 | 357 | 350 | 1.7E-218 | – | |
| SUPERFAMILY | 15 | 313 | 299 | 2.02E-84 | ||
| ProSiteProfiles | 23 | 279 | 257 | 47.962 | ||
| SMART | 23 | 279 | 257 | 2.1E-99 | ||
| Pfam | 23 | 279 | 257 | 1.3E-71 | ||
| ProSitePatterns | 29 | 52 | 24 | - | ||
| Gene3D | 99 | 287 | 189 | 9.5E-63 | – | |
| ProSitePatterns | 138 | 150 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0108600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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