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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0111900 |
| Transcript ID | LotjaGi4g1v0111900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxygen-evolving enhancer protein 1; TAIR: AT3G50820.1 photosystem II subunit O-2; Swiss-Prot: sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein 1, chloroplastic; TrEMBL-Plants: tr|I1MNK0|I1MNK0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0111900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16035838..16038733) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGTGGTCGGATCACAGTCACCAAAACTCTGTGGATCCCAGTATCTTTATCCCAATTGTGAATTTTACAACGTGGCAA CCAAGAAAACAATTCACATTAGCTTCAATCCTCCAATAAGAGACCACCTTATCCTATCCGTTATCTTACTCACACCACAT CCACCAAATAACTGTCTCCTCTCTATTCTCCACCAACACAAAAACGCTCACAAACTAGCTTCTTTGGAGAAAACATTAGA GACAATAGTGGCGGTGGTGGGAACAATGGCAGCCTCACTACAAGCAGCAGCTACTTTCATGCAACCAACCAAGTTTGGTC GCACCAACACTTTGCAGCTGAAATCTACTCAATCCATTTCTAAGGCTTTTGGGTTGGAGCCCTCTGCAGCTAAGGTCTCA TGTTCCCTTCAGGCTGATTTCAAGGAGTTGGCTCACAAGTGTGTTGAAGCTACCAAGATTGCTGGGTTTGCTCTTGCCAC CTCTGCTCTAGTTGTCTCTGTATGTTACCTTATCTTCACCTCTCTTTCTATTTCTTGTTTACTTCCGTTTTCCAGCTTAG TTTGCATGATTCATTTAATTAAAGCAAAATTGAGTATTTTCTGTTTGATGGTATAGTAAAGATCAACTCTTGATTTTTTT TTTTATTATTGTTGGATGATCTGCTCCTGGTTTCTTAGTAGTTCATTGTTCTGGTGTCCATTGAAATGGGAGAGATTATG GTCTAATTTAAACATAGATTTTTTTGTGAAATATAATCATCAAATTTAAATAAAAAAAGAAAGAATCATGTTAAAATCAT GTTATACTTGCTCAAATAGAAGAAATTGTCATGGCATATTGGGTTAGGTTTGAGATCAATTGCAAATTATGCAATGTAAT GAAAAAATGTGCTTTATTATTATTATTATTATTATTTTTCATGTGACATTCAGCATAAGAAGTTTGTGATCCCATTCCCC ACCCAAGTCTGTGGTCTGTAGTTAGTTTACACCACATAATCATAGCCAAACTGAATCATATTTGGATATTCTTCTACAAT TGATTCTAAAACCAATTGAGGGGAGAACCTCTATGGTGAGTAGCTTCTGAGTGTCAGAATTGATTCGGTGAAAAGAGAAA CTCATATGAACATGCTAGTAGGCAATTCTATAGTGGGCTATGTTAAAAGCTATTGTAGTACATGTTATTCACAATATGCT ACAATTAATTTGAAGAGAATTATTTTCACTTGTGAACATTTTTGTTGATCTACGGTAGACAAAGCCTACTAACTTAGATC AGAGATTATTTGCTAGAGTTGATGAGAACTGAGTACTTACTAGTTGTCCTGCTGCTTATTTCATTGTGATTTGCAAAGCA CATTACTAACTATGAATACGCAGGGAGCAAGTGCGGAAGGTGCTCCGAAGAGGCTAACCTTCGATGAAATCCAGAGCAAG ACATACATGGAAGTGAAGGGAACCGGAACCGCAAACCAGTGCCCCACCATTGAAGGGGGAGTGGAATCATTTTCCTTCAA GGCCGGGAAGTACAATGCCAAGAAGTTCTGCCTTGAACCCACTTCATTCACAGTGAAGGCAGAGGGAGTAGCCAAGAACG CCCCACTTGAGTTCCAAAACACCAAGCTCATGACACGTCTGACCTACACCCTCGACGAGATCGAAGGACCCTTTGAGGTT TCCTCTGATGGCACTGTCAAGTTCGAGGAGAAAGATGGCATTGACTACGCTGCTGTCACAGTTCAGCTTCCCGGTGGCGA GCGTGTTCCATTCCTTTTCACCATCAAACAGTTGGTAGCATCTGGGAAGCCAGACAGCTTCAGTGGGGAGTTTCTAGTGC CTTCATACCGTGGATCTTCCTTCTTGGACCCAAAGGGAAGAGGTGCGTCAACTGGTTATGACAATGCTGTCGCATTGCCT GCTGGTGGCAGAGGAGATGAGGAAGAACTTGCTAAGGAGAACAACAAGAGTGCTTCTTCATCCAAAGGGAAGATCACATT GAGCGTGACACAGAGCAAGCCTGATACCGGTGAGGTGATTGGTGTGTTCGAGAGCATTCAGCCGTCCGACACTGATTTGG GAGCGAAAGCTCCAAAGGATGTGAAGATCCAGGGAGTTTGGTATGCTCAGCTCGAGTCATAGACAGCTTTATCTCTCTTC TGCTTTATTTTGTATTTTGTTGTAACTTCTCAGTGTTGCTGCAATTACCTTTGACACAACTGTCCAAGCATGAGAGTGTT ATCCTTGTTTGTATGTATACTATCGACTTTCAATTATAATGCTCGAAAATGTCAAAGGTTTAAATTGGTGGTGTGTGTGT GTTTTACAGCTTCTATTCTGGAATTCGATTGTTTTTGTTCCTCATTGCTGGTAAATGGTAATATGGTAGTAACAAGGTCA CCACTGTATTTGAAGAGAGGTTTCATTGAATCACGGAACGATAGCTCAGCTATGTGATCTGAATATGGTGTTAGACTTAG ACTGTTAGTGGTTTGATAGCAGAAGAAAACAAATGTGGTTGCCTCCTCAGCTCTGGTTCACAAAAAATTTCAAACATTTT TATGCCCGTACGAGGATTAAATATTTTGAACTAAATCATGTGATTGGGTCATAGCTCATAAAGAGGAGCTTTTCAAAATT CTAAAAATGCTGCAATATGGAATGAACTAACACGGGGGGGGGTTACTCGACCAAATTAGGATCCCAAGTATGTAATAGGT GTAAGTACGAATTGTCTCAAAAGCTTAAACTATAATTGTTTTATATTATGATTTCTAATGCGTGAACCAAAGCATAAGCC CACCTAGCATTTGTTGAGATTTAATTTGTTTTATTAGAAGAATTGGGGTGAGAATGATCGAACTCTATATTGTTTAGGCG TAGAGGCACTGATATG
CDS sequence (LotjaGi4g1v0111900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCCTCACTACAAGCAGCAGCTACTTTCATGCAACCAACCAAGTTTGGTCGCACCAACACTTTGCAGCTGAAATC TACTCAATCCATTTCTAAGGCTTTTGGGTTGGAGCCCTCTGCAGCTAAGGTCTCATGTTCCCTTCAGGCTGATTTCAAGG AGTTGGCTCACAAGTGTGTTGAAGCTACCAAGATTGCTGGGTTTGCTCTTGCCACCTCTGCTCTAGTTGTCTCTGGAGCA AGTGCGGAAGGTGCTCCGAAGAGGCTAACCTTCGATGAAATCCAGAGCAAGACATACATGGAAGTGAAGGGAACCGGAAC CGCAAACCAGTGCCCCACCATTGAAGGGGGAGTGGAATCATTTTCCTTCAAGGCCGGGAAGTACAATGCCAAGAAGTTCT GCCTTGAACCCACTTCATTCACAGTGAAGGCAGAGGGAGTAGCCAAGAACGCCCCACTTGAGTTCCAAAACACCAAGCTC ATGACACGTCTGACCTACACCCTCGACGAGATCGAAGGACCCTTTGAGGTTTCCTCTGATGGCACTGTCAAGTTCGAGGA GAAAGATGGCATTGACTACGCTGCTGTCACAGTTCAGCTTCCCGGTGGCGAGCGTGTTCCATTCCTTTTCACCATCAAAC AGTTGGTAGCATCTGGGAAGCCAGACAGCTTCAGTGGGGAGTTTCTAGTGCCTTCATACCGTGGATCTTCCTTCTTGGAC CCAAAGGGAAGAGGTGCGTCAACTGGTTATGACAATGCTGTCGCATTGCCTGCTGGTGGCAGAGGAGATGAGGAAGAACT TGCTAAGGAGAACAACAAGAGTGCTTCTTCATCCAAAGGGAAGATCACATTGAGCGTGACACAGAGCAAGCCTGATACCG GTGAGGTGATTGGTGTGTTCGAGAGCATTCAGCCGTCCGACACTGATTTGGGAGCGAAAGCTCCAAAGGATGTGAAGATC CAGGGAGTTTGGTATGCTCAGCTCGAGTCATAG
Protein sequence (LotjaGi4g1v0111900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASLQAAATFMQPTKFGRTNTLQLKSTQSISKAFGLEPSAAKVSCSLQADFKELAHKCVEATKIAGFALATSALVVSGA SAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIEGGVESFSFKAGKYNAKKFCLEPTSFTVKAEGVAKNAPLEFQNTKL MTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLD PKGRGASTGYDNAVALPAGGRGDEEELAKENNKSASSSKGKITLSVTQSKPDTGEVIGVFESIQPSDTDLGAKAPKDVKI QGVWYAQLES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 330 | 330 | 1.6E-192 | – | |
| PANTHER | 1 | 330 | 330 | 1.6E-192 | ||
| Pfam | 96 | 328 | 233 | 1.3E-97 | ||
| SUPERFAMILY | 97 | 329 | 233 | 2.35E-99 | ||
| Gene3D | 128 | 329 | 202 | 5.0E-98 | – | |
| Gene3D | 235 | 273 | 39 | 5.0E-98 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Photosystem II oxygen evolving complex | A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ). | ||
| Biological process | Photosystem II assembly | The aggregation, arrangement and bonding together of a set of components to form a photosystem II complex on the thylakoid membrane. The photosystem II complex consists of at least 20 polypeptides and around 80 cofactors in most organisms. | ||
| Molecular function | Oxygen evolving activity | Catalysis of the reaction: 2 H2O = O2 + 4 H+ + 4 e-. The evolution of oxygen from oxidizing water is carried out by the oxygen evolving complex in photosystem II of plants. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle. | ||
| Biological process | Photosystem II stabilization | The stabilization of the photosystem II protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis. |
Expression pattern of LotjaGi4g1v0111900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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