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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0113500 |
| Transcript ID | LotjaGi4g1v0113500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | electron transporter, putative (Protein of unknown function, DUF547); TAIR: AT5G66600.1 electron transporter, putative (Protein of unknown function, DUF547); Swiss-Prot: sp|Q8V736|POLG_CACV4 Genome polyprotein; TrEMBL-Plants: tr|K7MHC7|K7MHC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0113500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16355596..16360728) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAACTGAAAAGAAATCAGCAACCTTAAAACCCTTTGAACCTTTGTGAACACAGATAAAGCCACTATTTATTTTCCAC TTCTTCTCTTGAAGCTTTTATGGTGGAAGAAATTTTCCACTTTTGCACGTTTTGACATTTTCCCTGTTCCACCATTGCTT CTTCTACAAATGCCAAAAAGCCTATGACTATGATATGAGCATAGCACAACACAGTTAGAGAGAAGAGAAGGGTCATTGGT CAAAAAGTCTACTCTTCTCTCCGCATTCGTGGGTTTGGTTTACTGAACAAAAACAACCCCATTATAGTTCTAAACTGCAT TAGAACCAAGCAAGTAGTTCCTTTGTGGGTGATGAAACGAGGAGACATGTCAAGTCAATTCTTGGACTCTAGTTTGTAGC TTCTCGTGGCTATTTGTGCATCTGGGCCATTGTGTTTCTAACTGTTCTGTTTCTGAGTTCTTGTTTGTTATGTTCCTGGG TACGATGGATGGAGACTCTGTCTGTCTTGCTTCTTTTTCTTTTCTTTTCCTTAACTCTTTCTTACTGTTGCTGATGTTAT ATAGTGTGAAATGTATTTGGTTCTTCCTTGAAATTAACTCTGGTTTTGGATGGTTTTCAGAAATGGGGCTTGAAGGTCTC ATTCCAATGCACAAGCGTTCAAAGAGGTACCCTTTTGTTCCATATGTTTAGTTTTTCTCCTGTTGCTTAAAGTTGGTTCC TTTATGTGTGTGCTCTTGATTGTGGAATTTTTACATGAGGGGTTGTTTGTTTTCATAAAAAAAAAATGAAGCTTTCACAT TTTTATGTCAACATCTTCTGCAATTGCTCATTCTTCCATTTTGGTCTTAGTCTGTGTACCAATTTGAGTACTTTATTTTG GAAGAAGGGTGTTTCTGGTTGAAACTGAAATTGAATGTTTATACCTCAAAATAAAATACAGTACCCGATAATCATCATTT TAACTGTGATTTACTGTTCTTGTATGACAGCTTTCCCAATAAAAGAACAGTCGAGGAGGATAATTCTGATGACGTTGAAG CCTTAGATCGAATAAAGCTGGTATAATTAATCACTTCATTATCATGTAGAAATCGCCACCACTTTTTTTCTAGCCTTTCT AGCTTAGGAAGGTACTATTCTTGTAAATGTATTGTTAAGCGTATATGATGCTGAACAAGTTTTGGGTTTAGTTGGTATTT GGTGTCATGAATGCCGAGGGCACGCTGAATTTATGTTTTCAAAGTTTAGTGTGGAGCGGATTAACAGAGAACTGATTTTG TGGAAAACATATATGTTTGGGGTAATTAGTTCCATCTCATAGAATTTTCATATTGACGGTTAGTTTACTACCATTTTCTG CAGTCCACAGGCATAACAAATAACTTCTGGGTAGTTATTTAGAAGCAAGAATTTCATGCCTTAGTTATTTGTTTATCTGG TTCCAGGATACAGGTTACCTCACGGAATGCGGTGAAGCAAGGAAAAAACCGACCCGTACAAATGATGTTCAATGTGCTCT CAAGCAAGAGGTACATAACCAGAACCTTTTCATTATAATCCTGCTGCCATATTTTTTTGCATTATTGTTCAATAAGTGTT TCTTTTAATCATGCTTTAGCTTTGTGCATTCGTCTACTGGCTCAGCAAACATCTACCTGATTGCTATTTTGTGTTAAAAT TATCTTATGCCAGATTCTACAGTTAGAAAAAAGACTACAAGATCAATTTGAGGTCAGATGCACATTAGAAAAGGCACTTG GATACAGACCTACATTTCTTGTTAATCCAAATGAGATGGCCATCCCCAAGGTTGGTACTTCTTCAATAAATTTGGGACAA TAAATGTGCATTTGCTTCTGATGTCAGAATTTTTAACCAATTATCAATCGGTGGAGCATATCCAGGAATAATAAATTTAT TTATATTTGGTTTTTGTTTTTAATCAATATAAGAACACTGATGTCATAACTCAACTTGCAAGCACACATATATTGTTCTG CAATCATAAGATTATTTTGCAGGCATTAAATGGTTATATGTTGTTTAGGAGTCTATTGTTAACTTAATATCTGGTATGGC TTTCTTGTTCATATATTGTTCTCTTTTTTATTAAGATTAGATTCTTTCTTTTTTTTGTGACTCCAGCCTACCGCAGAATT AATTAAAGAAATTGCGGTGCTTGAGTTAGAAGTTGTGTATTTGGAACAACATCTCCTCTCCTTGTACCGTAAAGCATTTG ATCAACAATTATCCTTTGTCGCTCCATCCACCAACGAGGAAAGAGTAAAGTCTCCTCCTCCAACACCTAGAGCAAGATTC ACTGAAACTTCTAAGCCTGAGGTATTGTTTAAAAGAGGAGGTTCTGCAGTAAAATCTATTGATCATGAGCTTGATACTCC GCAAAAGGAATATAATGGATATGAACCTGAGACTCTGGAGAAAGAGCAGAACTTACATCAGCAAGAAGGAAAGCATTTAG ACTCTGGTATATATCGTTGCCACTCCTCATTATCCCAGTGTTCGTCAGCATTCGCAACAAGATCATCTCCTCCTTCAGAA GGGTTGACCGAATCTCTGCGTGCTTGCCATTCACAGCCCTTGTCCATGATGGAGGTAAATCACTTTCCAAGGATAATTCT TTTATCAGTCTTTTATCTATTTGGAGGCCTATCTGACACAGTTTATTCTACACAATTAACCCAGAATGTTGATACTCCAA CAAAAGTAATCAGCCTGGCAGAACATCTTGGTACCCGTATATGTGATCATATTCCAGATGCTGCTAATAGGCTTTCTGAG GAAATGGTTAAATGTATATCAGCTATTTATTGCAAACTCGCAGAACCACCTGTGACGAATCCTAGCTTTTCATCTCCCAG TTCATCCTTGTCTTCAACAAGTCCATTTTCTATTGGAGATCAAGGGGACATGTGGAGTCCAGGGTATAAGAATAACTCCG CTTTCGATCTACGGTTAGACAATCCTTTTCATGTCGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCACTATGGTTGAG GTATCGTGGATATATAGAGAGAATGAAAAATTGGGTGATACAGCGCAGTTGCTTCAGAATTTCAGGCGAGTCTATCAATA TCTGATTATGATCATGAAACTATAATGTGAAAAGTACATAATTTAGTGGGAATTATTTGATCCCTTCTAATGATAACAGG CATGTACTTATATGTTGTTTCAGGTCACTAATCTGTCAATTAGAAGAGATAGATCCTGGGAAGTTGAAACATGAGGAGAA GTTAGCTTTCTGGATCAATATACACAATGCTTTAGTGATGCATGTAATATTTATTCTCAAAAGTCAAAACTAATTTTCTC TTCAATACTTTCCCATTTCTCTCACTTGCACTCGATTAATTCGGTTATAATCTGTTCTTTGGTTTCTAATAGGCATTTTT GGCTTATGGAATTTCTCAAAGCAGTGTGAAAAGAGTCTTTCTTCTGTTGAAGGTAAATCCACAATAGTAGCTCTAGTAGT CAATTAAGTATGAAACTCTTTCGTTGAACTCAACGTTGATCCGCGTTTGAGTCAACGTGGCAAAATCTTGTTTCTACGTT CATGCATTGAGATGTGTATTTTTCAGTTTGCGTTGACGCGCAAACAGGAAACCAAACGGACACTTAGCCTAGCTGCTTTT GCTGACCTTCTCAATGTCATGATGCTCTTTGCAGGCTGCATATAATATTGGGGGTCATACAGTTAGTGCAGACACAATAC AGAGTACTATACTTGGGTGCCGGATGTCGCGTCCTGGACAGGTCGGTCGTACAATCCTAACCCTTCCCCTACAAAAAAAA GAAAGAAAGAAAGAAGAAAGAGCCTGCCATTCAGCATATCTTGGAAATATGAATATCCCCTCAATTTGCAAAGTAGTTAT GTTGTAAATCTTAGAGTGACTTACCTTCTACTAACATGGTTCCTATTGTAGTGGTTCCGCTTGCTCTTTTCTCCAAAGAC AAAGTTCAAAGCTGGGGATGGACGACAAGCATACGCAATTGAGCATCCTGAGCCTCTTCTGCACTTTGCACTATGTTCAG GAAACCACTCTGATCCCGCGGTAATTTTACCATTTCTTATATATAATGTGATTTTACTTGATTTTAACATCTTCATTTTT CAACACTGGATGCTATGTGCTCCATCAGCACTTGATTTTTGTTTGAGAAAATACTTTCTGCACTTGTAAATCAAATTGAC ACATCATTTAGAAATGGAACAATTTCATTTGAGACTTGTCTAGTTTATGTACAACCCTGTTTGAACTTCTATTTATTAAA TCACTTGTGAAGGTTGTTCTTAATGCCTGAACTTGGAAATCCTTCTTCAATTGATTTCCAAAATCAATTCTGGAAAGAAG CTTATTTGTGTAACTTCCGGTGCAAGTATGACATCTAGAAATCAAATTATTGTGTTTAATATGGATTTACATACTTTAGT GAGAGGTTTTTATCTTGTGATGAACTATGCAGGTACGTGTATATACACCCAAGAGAGTGTTTGAACAACTAGAAGTCGCG AAAGAAGAATACATTCGAGCTACATTTGGGGTACGCAAGGACAAGAAGATACTTCTGCCCAAGATTGTAGAGTCATTCGC GAAGGACTCAGGTTTGTGTCATGCTGCTATTATGGAGATGATACAACAGGCTGTACCTGAATTCCTAAGAAAGGGTGTTA AGAAATGTCTCCTTGCAAAATCCCAGAAGAACATAGAATGGACTCCACACAACTTCACTTTTCGGTATCTCATACCTAAG GAGCTGGTAAAATAGTTACTTTGGGGAGCGATATGAACTGTTTGGATTATTATGTATTCTTTTGTACAAAGTTGACAGGG TAGCAGCAAAGGCAAAGTTTGATATTGCAATATGCATCATTGTACCATTTTGCATATGTAATGTCTTTACCATGCCATTC TAGTATTTGTAATTTCATTAGTCTATCAAAATAGTTGAGATTCTGCTATGTGCAGTGTAAATGATTTGTTTTCATAATCA ATTTGTCATTGGGATTTCTTTGTAATTCATTACTTGCCTGTTGGGCATTGATATGATGATGTTGTGCACAGTTAAAACAA AATCTAAACCCGC
CDS sequence (LotjaGi4g1v0113500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCTGGAAATGGGGCTTGAAGGTCTCATTCCAATGCACAAGCGTTCAAAGAGCTTTCCCAATAAAAGAACAGTCGA GGAGGATAATTCTGATGACGTTGAAGCCTTAGATCGAATAAAGCTGGATACAGGTTACCTCACGGAATGCGGTGAAGCAA GGAAAAAACCGACCCGTACAAATGATGTTCAATGTGCTCTCAAGCAAGAGATTCTACAGTTAGAAAAAAGACTACAAGAT CAATTTGAGGTCAGATGCACATTAGAAAAGGCACTTGGATACAGACCTACATTTCTTGTTAATCCAAATGAGATGGCCAT CCCCAAGCCTACCGCAGAATTAATTAAAGAAATTGCGGTGCTTGAGTTAGAAGTTGTGTATTTGGAACAACATCTCCTCT CCTTGTACCGTAAAGCATTTGATCAACAATTATCCTTTGTCGCTCCATCCACCAACGAGGAAAGAGTAAAGTCTCCTCCT CCAACACCTAGAGCAAGATTCACTGAAACTTCTAAGCCTGAGGTATTGTTTAAAAGAGGAGGTTCTGCAGTAAAATCTAT TGATCATGAGCTTGATACTCCGCAAAAGGAATATAATGGATATGAACCTGAGACTCTGGAGAAAGAGCAGAACTTACATC AGCAAGAAGGAAAGCATTTAGACTCTGGTATATATCGTTGCCACTCCTCATTATCCCAGTGTTCGTCAGCATTCGCAACA AGATCATCTCCTCCTTCAGAAGGGTTGACCGAATCTCTGCGTGCTTGCCATTCACAGCCCTTGTCCATGATGGAGAATGT TGATACTCCAACAAAAGTAATCAGCCTGGCAGAACATCTTGGTACCCGTATATGTGATCATATTCCAGATGCTGCTAATA GGCTTTCTGAGGAAATGGTTAAATGTATATCAGCTATTTATTGCAAACTCGCAGAACCACCTGTGACGAATCCTAGCTTT TCATCTCCCAGTTCATCCTTGTCTTCAACAAGTCCATTTTCTATTGGAGATCAAGGGGACATGTGGAGTCCAGGGTATAA GAATAACTCCGCTTTCGATCTACGGTTAGACAATCCTTTTCATGTCGAAGGACTCAAGGAGTTTAGTGGGCCATACAGCA CTATGGTTGAGGTATCGTGGATATATAGAGAGAATGAAAAATTGGGTGATACAGCGCAGTTGCTTCAGAATTTCAGGTCA CTAATCTGTCAATTAGAAGAGATAGATCCTGGGAAGTTGAAACATGAGGAGAAGTTAGCTTTCTGGATCAATATACACAA TGCTTTAGTGATGCATGCATTTTTGGCTTATGGAATTTCTCAAAGCAGTGTGAAAAGAGTCTTTCTTCTGTTGAAGGCTG CATATAATATTGGGGGTCATACAGTTAGTGCAGACACAATACAGAGTACTATACTTGGGTGCCGGATGTCGCGTCCTGGA CAGTGGTTCCGCTTGCTCTTTTCTCCAAAGACAAAGTTCAAAGCTGGGGATGGACGACAAGCATACGCAATTGAGCATCC TGAGCCTCTTCTGCACTTTGCACTATGTTCAGGAAACCACTCTGATCCCGCGGTACGTGTATATACACCCAAGAGAGTGT TTGAACAACTAGAAGTCGCGAAAGAAGAATACATTCGAGCTACATTTGGGGTACGCAAGGACAAGAAGATACTTCTGCCC AAGATTGTAGAGTCATTCGCGAAGGACTCAGGTTTGTGTCATGCTGCTATTATGGAGATGATACAACAGGCTGTACCTGA ATTCCTAAGAAAGGGTGTTAAGAAATGTCTCCTTGCAAAATCCCAGAAGAACATAGAATGGACTCCACACAACTTCACTT TTCGGTATCTCATACCTAAGGAGCTGGTAAAATAG
Protein sequence (LotjaGi4g1v0113500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLEMGLEGLIPMHKRSKSFPNKRTVEEDNSDDVEALDRIKLDTGYLTECGEARKKPTRTNDVQCALKQEILQLEKRLQD QFEVRCTLEKALGYRPTFLVNPNEMAIPKPTAELIKEIAVLELEVVYLEQHLLSLYRKAFDQQLSFVAPSTNEERVKSPP PTPRARFTETSKPEVLFKRGGSAVKSIDHELDTPQKEYNGYEPETLEKEQNLHQQEGKHLDSGIYRCHSSLSQCSSAFAT RSSPPSEGLTESLRACHSQPLSMMENVDTPTKVISLAEHLGTRICDHIPDAANRLSEEMVKCISAIYCKLAEPPVTNPSF SSPSSSLSSTSPFSIGDQGDMWSPGYKNNSAFDLRLDNPFHVEGLKEFSGPYSTMVEVSWIYRENEKLGDTAQLLQNFRS LICQLEEIDPGKLKHEEKLAFWINIHNALVMHAFLAYGISQSSVKRVFLLLKAAYNIGGHTVSADTIQSTILGCRMSRPG QWFRLLFSPKTKFKAGDGRQAYAIEHPEPLLHFALCSGNHSDPAVRVYTPKRVFEQLEVAKEEYIRATFGVRKDKKILLP KIVESFAKDSGLCHAAIMEMIQQAVPEFLRKGVKKCLLAKSQKNIEWTPHNFTFRYLIPKELVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 418 | 418 | - | – | |
| PANTHER | 7 | 624 | 618 | 0.0 | – | |
| PANTHER | 7 | 624 | 618 | 0.0 | – | |
| Pfam | 61 | 142 | 82 | 1.1E-27 | ||
| Pfam | 412 | 545 | 134 | 1.9E-44 | ||
| Phobius | 419 | 439 | 21 | - | – | |
| Phobius | 440 | 624 | 185 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0113500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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