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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0114200 |
| Transcript ID | LotjaGi4g1v0114200.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit H; TAIR: AT3G42050.1 vacuolar ATP synthase subunit H family protein; Swiss-Prot: sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H; TrEMBL-Plants: tr|B7FJS8|B7FJS8_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0114200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16513896..16519747) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACCAGGCCGAATTAACCGTCGATCAGGTTCTTCCCGATCCGTTCCCTCCCTCATTCTTCGATCTGATTCTCAAATC GCCGCTCGATTCCGTTTCAGATTTTCACTTCTTCTCGATTGCAATGTCGAATTTTACTGATTATCTCTATTCACATTGTG TTCTTGTGTTTTCTCCTTAGGTTCTCAGTAGGGATATCCCATGGGAGACTTACATGTCCACCAAGCTCATCTCAGGAACT AGCCTTCAGCTCTTACGGCGTTACGATCACCGATCAGAAAGCCACAGAGCACAGTTGCTTGATGATGTAAATTTTTATTA TCAATCAATTTGCCAAACAAATCGAATTAATTATTGCTGTCCTTTTCGCGATTTTTAAGTGAGATTAATTTCTATGCACT GACAACAGTGTAAATAATTGCAAATTTCATTTGAATTTTGAAGTAGGTTTGATTTCTGATTCTTCTGTTTGCTGTTTAGT GGTGTTGAGAATTCAACTTTGTTGTGTGGCAGGATGGTCCTGCTTATGTTCGCGTCTTTATTCATGTTTTGCGCGATATT TTCAAAGAAGATACAGTGGAGTATGTTTTGGCACTGATAGATGAAATGCTTACTGGTAATTGTTGGAATTGGCCATGTTT TTCTTACTTTGTCTGTTGTCAGTAGTGGCATAGCCTTTAAATTGTCATCCTTCTTCGCAGCAAACCCGAAGAGAGCAAGA CTTTTTCATGACAGCGCTCTTGCAGATGAAGATACTTATGAGCCTTTCCTAAGTTAAGTACTTACAGAGATGTGTTTTTG TTCTGCATATTGGTTATGGATTTTCTCCGTTTTGGAGTTGATGGAAGCTGAAACACATTGTATTAGTTATCTATTATGCT TCATGATGTTATTTTTTTCCGATTTAATTTCTTATTATTTTAAATTTTTACCATTTGTTTTGAATAGAATATAGTTGTTG TGATGGCTATCACTACAGCCAAACTTTTACAAAAGATTTCTTTTGCCGCGGGTTGACATCTTGGTTCAACCATTGATGAC CATATATCTGCTTTGGATGGAACATACCTTTCTCTTTACTTGGAACAGAGACTGAGAGTCTCATAATTGTTTCTTCCACA TTTGTATTTTTATTTTCAGTTTATTTTTACCACTTAGATGAGAAAAAGCTGTATATTCTTGTCATCTAGATGATGTATCT GATTTTTTTTTTTACTTTGACTATTTTATTTGGATGTTTAAGATCCTTGATTATGGAAATACAAAAAGTAAAAACTAACA ATATTGTCGGTCTTTCAGATTGCTTCGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCCTTAATAG CTAGGTAATACAAAAATGAGGTGTTCTCACATTCTAATTCAAAAACATCTGACTTAAATGAATTAGCGTCGTGTTGTATA AGTTACTTTTCAGTTATTGCGAAATTTCACCCTTTTCTGATTATAGTGCCAGGCCAAAAAATCAGAAAGAGATTGCTTCG AATAGAGAAGCATCAAACGAAAAGAAACCATTTACCTCTATTGATGATGTTTTAATAGGATTGGTGAAATGGCTTTGTGA GCAGGTATTTGATACTGAAACTGTTCCCTTTTTCTCATCCATAAACTTTTCATTAGCTGATAGTCTTGGGTTTGTGAACG GTGTTATCAATTTGAGATATATAAGGTCATTGCTAGATAAAGATGTTTACTTCTGAAAGAGAAAGCTAAACATTTTGAGC TTACTATTTAAATATATGCTAGCATTTTATATCATTATATGAAGATCAATTGTACATTGGAAGAGTCATTTGTGATGTGT GTTTGTGTATAGAAAAATGTCCAAATTTACACTTATGTGACATGATGATGGCTTTTTCTCTTTCTAAATTTAAGAAGTGT ATGAATAGATGTTAAGAACTGTAATTACATTAGATGGGTGAAAGAGATGGGCCTCCAGTTAATTTTAAATTACAGTTTTT AGTTTTCCTTTGGTTTCAAGTACTAAAATAAACCAAACTCTGGGTTTTCTTTTCTTTTTTCTTTTTTTTGGGGGGGGGGG GGGGGGGTTTAAGATGCCAAATGAGAGAATTTTCTGAAGTTGCCTAACGGACATGAGAAGCTGTTAGCCCTTACTCCAAT CCTGTACAGATTTGAGCAAGATAAGCTTTAGCATGCTCTATAGAAGCATAGTATCGCTCTCAGTAGATGAAACCAGGGTC GTTAATGGCAGATAGCGTAGTGTAGCGGCAAGCCCAAAAAACGCTATTTCGAGCGCTATTGCGGCGCTATAGCAGCAAAT AGCGGTGAATAGTGGAGTAGCGGTGAACCCCCAGGGCGCTACGCTATAGGCTATTGCGCCGCTATAGCGCGCTATTAACA AGCCTGGATGAAACACTTACAAAAGTTCACGAACATGTCACGTTTTCTGAAGTTGAAAACTTAGGCTATACATTGGACTA CAGGAGCACTTAAACCAGATGTGCTCATTCATAGACTCAAATCAACAAGAAGTTTACAAGATGTTTCACATGAAAATAAA AAATGCATGTTAAAATTCAAAGATTTTATGAGGCGCAATTCTATGATGACACGTATAACAAAATCGCATGCTTGTCTGAG TAAGTGATTATTTTATCTGTAGCTGAAGAAACCTTCTCATCCCACCCGTGGAGTGCCAACTGCTATCAATTGCCTAGCAA CACTACTTAAGGAACCTATCGTTAGGTCTTCCTTCGTCCAAGCAGATGGGGTCAAGTTGCTTGTTCCATTGATTTCTCCA GCATCCACTCAACAGTCTATTCAGGTAAGTTTGCCAGATTCCCTAGCTCTGAGAATATGAAGTTCTGAATAAGTAGATTG TTCTTCAGTTGACCCATATGAATTCTGCTAATAGATGCTAGGGTAAGCTGTAAGAATGATGTATCTAGTTATCTTATGAC TGTAATTCTTTCTGGAAATCAGAAGCCTTCACTGGATCTATTAATAGATGACTAAACTAAACTAAACAATAACATGCTAA GTTCATCTGGTCAAATACTTACTTCTTTTTTATGAAGAAGAATGGCAGCTTGGTACCTGGGGATTCCAGATTTGTTGGCT TCTAAATTTACTTATCAACAAAATTATTACTTATACAGTTCACAGCATCATTGCACTTACGTGGGAAATAAAGGGAAATT AATTGAGAATTTCCTTTGTAACAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCTTGTCCTATTTCGAGCCGGCAAT TGAATATCTGGCTACTTCAAGGACCCTTCCGAGACTTATTGATGTTGTTAAGAGCACTACAAAAGAGAAGGTATAGCTGA TTTATTGAGTTTATATTTGTCTCATTTTATCTTTTAAACAAATGTCGTTCACACGATTCTTTTTCTTAACTGGTAATATT ATATTATTAGTTAATAGTTATATGATAGCTGGTAGCAGCATTTGTATTATCTTTTTGTTTTATGCTCATCCATGCCGTTG GTAGCAACTAGCAAGTTGAGGTTTAAAAATTTTTCTGGCATAAAAGTCTAATGTTAGCACAATTGTTTTGCCTATTTTGG TAGGTTGTTAGAGTTGTTGTCTTGACTCTTAGAAACTTGCTTTCAAAAGGGACGTTGGGTGCTCAGATGGTGGACCTTCA GCTTCCACAAGTTGTTCAGAGTTTAAAAGCACAAGCTTGGAGTGATGAGGTGAGAGAATAAAAGACCTACATAAACTTAA CTCCTGAAACTTTGCTTGTGCAAATTGAATTAAAATATAATAGGTTGCAGAGTTTAACCACTGGAGGTGATTTTTTTATG TATTTTTTAGCATTGTTGAGGTACTTGCAGTCATAACTTTTTTTCCCTTTTTTAGTATTGTGAGTGCAATCGTGACATCT GATGTAGTTAGGACTTAGGATATTTGCAATGATATTTATCATTTACTGGATTTCTGTCATACTGTGCATGTGGTACTGAT TTGTTAAATACAATTGTCTTTTTACATGTCACATCACGTTATGCATTTCAATAGAAAAGGAAAAATCTGATGGACTTCTC ATAACTCATTGTAATGATAGGATCCTCTCACCCAATAATTTATTGCCAGTCAAAACTCAAAAGTTTACATATGACTTAAC AATGTGGTAGATGAAATTGGATTGCTTAATAATGGTAAAGCTTTGACACATAGTATCCATCAACTCTCTTGCATTTCTTC CATGACAACAACAACTTATCCTTCTCTTGTTTCAATATGCATTTCCTGCTCAAGCATACATGAACATTCATGCATTTACC AACTTGAATGCACATTGATGGAAGTTGACCAAATACCCTTTCTATCAGCTCTTCTGCATGAATTGGCGTTAGTTATGGTT GATCATTATATATTTCTACTTTGTTCTTGTAATATTGGTATTTTACATGTCTTGATGTTTCTCACTTTATGTTAAATTGC AAATGCAAAATAGTGGGATGTTATTTTAAACTTCAATTGTCACATTTTCTTTCGAAGATTCTATCTCTCGTTGCTTTCCC AACACTTCTATTGATTAAGCAAGTTTATCATAGGACTTGCTTGAGGCGCTGAATTCCCTGGAAGAAGGGCTTAAGGATAA CATCAAGAAACTAAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTTCTTGGCAATCTGGATTGGTCTCCCATGCACAAGG ATCTCATATTTTGGCGAGAAAATGTCACCAATTTTGAAGAGAATGATTTCCAGGTAACTGCTTTATCTCTTCCTTTTTTA ATTCGATGCAATTTTTATTTAAATACCCCTAATATTTTAGACTTCAAAAAAGAAAAACAAAAAACTAAAGGATTTCAGCT AGTGGAGCCTTGTTGTGATAGTATAAACAAGGATAGTGTCTTTCAAGGAAAAGATCGTGTAATTCGATTTTGATTACGGT GATATGACTTTTCAAGTGATAGTTTTTAACATCATTAGGATGCAATGTAATGTCATGAAAATAAACAGTAAATGGACAAA TTTATTCTTTATGGAGCCTTATATGTTCACAGCTTGCAGAATCTCCATTTTCTCATTGACTTAACCCTATTGGCGAAGAG ATTAAATCTGTTTTATTGATTTATTTTGTAAATGTTTTGTGGGGATGAGTCTGAAGAGAAGGTATAACAGGTCAAAGATG TCAGGTGGTCCAAAATATAAACAAAAATCTTTAAGGTACTTTTGGAGAACATCCGGAGACATGGAAAGGATCAATTGATT CTGTCTGGGGTCTTGTTGTTTCGATAATATGTTACAAGATTTGTTCTTCTACAAGAAATGAAGACAACATTTGGTTTTTA GTGTCATCTAAAAGAAGCAAAATATGTTGCACTACATTGATTTTGATCAGAAACATTGTAAATGGATTTTAAAATATTAT GTTCCTGTGAGGGTAGAAACCTTCGTAGATGCTGTTCCTTCTTGCCATTTAGCAATGAAATAAGAAACACAGAAAAAACA CTAGTTCTAGTGCAATTCTTAATTCTTTATCTTCTCTCAAACATTCATATATTAGTTATTGATAGTATCTTCATCTTTTG CAGATCGTAAGGGTCCTAATAACAATTTTGGACTCGTCCAATGATCCAAGGACTCTGGCTGTTGCATGCTTTGACCTTTC ACAGTTTGTCCAGTACCATCCATCTGGGCGGATTATTGTGGCCGACCTCAAAGCCAAGGAACGGGTGATGAAACTTATGA ATCATGAGAGTGCTGAGGTTACTAAGAATGCACTGCTCTGCATCCAACGGCTTTTCTTAGGGGCTAAGTATGCAAGCTTC TTGCAGGCTTAG
CDS sequence (LotjaGi4g1v0114200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCAGGCCGAATTAACCGTCGATCAGGTTCTCAGTAGGGATATCCCATGGGAGACTTACATGTCCACCAAGCTCAT CTCAGGAACTAGCCTTCAGCTCTTACGGCGTTACGATCACCGATCAGAAAGCCACAGAGCACAGTTGCTTGATGATGATG GTCCTGCTTATGTTCGCGTCTTTATTCATGTTTTGCGCGATATTTTCAAAGAAGATACAGTGGAGTATGTTTTGGCACTG ATAGATGAAATGCTTACTGCAAACCCGAAGAGAGCAAGACTTTTTCATGACAGCGCTCTTGCAGATGAAGATACTTATGA GCCTTTCCTAAGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCCTTAATAGCTAGTGCCAGGCCAAAAAATC AGAAAGAGATTGCTTCGAATAGAGAAGCATCAAACGAAAAGAAACCATTTACCTCTATTGATGATGTTTTAATAGGATTG GTGAAATGGCTTTGTGAGCAGCTGAAGAAACCTTCTCATCCCACCCGTGGAGTGCCAACTGCTATCAATTGCCTAGCAAC ACTACTTAAGGAACCTATCGTTAGGTCTTCCTTCGTCCAAGCAGATGGGGTCAAGTTGCTTGTTCCATTGATTTCTCCAG CATCCACTCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCTTGTCCTATTTCGAGCCGGCAATT GAATATCTGGCTACTTCAAGGACCCTTCCGAGACTTATTGATGTTGTTAAGAGCACTACAAAAGAGAAGGTTGTTAGAGT TGTTGTCTTGACTCTTAGAAACTTGCTTTCAAAAGGGACGTTGGGTGCTCAGATGGTGGACCTTCAGCTTCCACAAGTTG TTCAGAGTTTAAAAGCACAAGCTTGGAGTGATGAGGACTTGCTTGAGGCGCTGAATTCCCTGGAAGAAGGGCTTAAGGAT AACATCAAGAAACTAAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTTCTTGGCAATCTGGATTGGTCTCCCATGCACAA GGATCTCATATTTTGGCGAGAAAATGTCACCAATTTTGAAGAGAATGATTTCCAGATCGTAAGGGTCCTAATAACAATTT TGGACTCGTCCAATGATCCAAGGACTCTGGCTGTTGCATGCTTTGACCTTTCACAGTTTGTCCAGTACCATCCATCTGGG CGGATTATTGTGGCCGACCTCAAAGCCAAGGAACGGGTGATGAAACTTATGAATCATGAGAGTGCTGAGGTTACTAAGAA TGCACTGCTCTGCATCCAACGGCTTTTCTTAGGGGCTAAGTATGCAAGCTTCTTGCAGGCTTAG
Protein sequence (LotjaGi4g1v0114200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDQAELTVDQVLSRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRVFIHVLRDIFKEDTVEYVLAL IDEMLTANPKRARLFHDSALADEDTYEPFLRNWFIQEKSCKILALIASARPKNQKEIASNREASNEKKPFTSIDDVLIGL VKWLCEQLKKPSHPTRGVPTAINCLATLLKEPIVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYFEPAI EYLATSRTLPRLIDVVKSTTKEKVVRVVVLTLRNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKD NIKKLSSFDKYKQEVLLGNLDWSPMHKDLIFWRENVTNFEENDFQIVRVLITILDSSNDPRTLAVACFDLSQFVQYHPSG RIIVADLKAKERVMKLMNHESAEVTKNALLCIQRLFLGAKYASFLQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 447 | 446 | 1.1E-257 | – | |
| PANTHER | 2 | 447 | 446 | 1.1E-257 | ||
| PIRSF | 2 | 446 | 445 | 1.1E-121 | ||
| Gene3D | 5 | 326 | 322 | 4.4E-35 | ||
| Pfam | 7 | 318 | 312 | 2.4E-79 | ||
| SUPERFAMILY | 8 | 437 | 430 | 3.2E-119 | ||
| SMART | 190 | 235 | 46 | 8.8 | ||
| SMART | 236 | 277 | 42 | 1.2 | ||
| Pfam | 324 | 436 | 113 | 1.2E-38 | ||
| Gene3D | 338 | 438 | 101 | 6.1E-31 | ||
| SMART | 397 | 437 | 41 | 65.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar proton-transporting V-type ATPase, V1 domain | The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Proton-transporting ATPase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi4g1v0114200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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