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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0116100 |
| Transcript ID | LotjaGi4g1v0116100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acidic leucine-rich nuclear phosphoprotein 32-related protein; TAIR: AT3G50690.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q9SCQ7|AN32_ARATH Acidic leucine-rich nuclear phosphoprotein 32-related protein; TrEMBL-Plants: tr|V7CGI0|V7CGI0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0116100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16825885..16830139) extracted from Lotus japonicus Gifu genome v1.2.
CCCCGCTACACCCTTCTCGAAAACAAACACAGAAACCTCCAATCCCAGCCCTCCATCCCTCCACGTCATCGATCCTCCTC GCTCCAAATCCAACGGCTCACACCACAACAAGACAAAACTCCCCGAACCACAAAGACTCACCCCACCTGAACCCTAGGTC AGAACCAGACCCAGAAACGAGAGAGAGAGAGAGAGAGGGTTTATCAATTCGCCTCCATTAACCAGTAGAGAGAAGAGAGA GAAAATTTATATAACAGAGTCTAGAGAGAGAGAGAGAGAAACCATTGAAACTGGGTTTTCAATTTCAATTTCAATTTCCC AATTTCATAGCACCACGCGCTCTGTGACTGAAAATTTTCAAGCTATGTATGTTTTTTGATTGTTAAAGCGCGCGCGTGGT GTGTACTGTGTGGTTGCTGCGATTTTGTATGAGATACAGAGTTTCGTATTTGATGGATGAGATCTGGGAGAGGGCCGTTG AAACGGCGTTAGAAGGCGAGAAGGATGATGCTTCGACGCGGACGCTAACCCTAGACGGCGCCGTTAAGTGTGTTCAGGGG CGGTTACCACCACCGAGCCTTCTAGAGAGGTTCGAGAATCTTCAGCATCTGTCGATAGCAAACGTCGGCGTTTCGTCGTT GGAGCAGTTCCCGAGGCTGAGGAGTTTGCAGAAGCTGAACCTCTCTGACAACCGCATCGCCGGCGGGTTGGAGTTTCTGG TGCAGGCGGGGCTGGACTCGCTGCGGGATCTTGATTTGTCGAATAATCGGATTCAGTTTATTGAGGATCTTGCGCCGTTG GCGGAGGTGAGGTTGGTGTCGCTGGATCTGTATGAGTGTCCGGTGACTAGGGTGAAGGATTATCGATCTAGGGTTTTCGG GTTGATTAAGTCGCTGAGGTTTCTGGATAAGATGGATGCGGATGGGAATGAGAGGCCGGAGTCGGATGATGAGGAGGAGG AGGAAGAGGAGGAGGAGGAGGGGGAGGAGGAGGATGATCCGGGGAGTGGGGAGATTGATGGCGAGGAGGATCGTGGGTTT GGGGTGAAGAATGGGCATGTTGAAGGGGCTGATGGTGTTGTGGATGCTGATGATGATGAGGAGAGCGATGCCGATGAGGA GGAGGTGGAGACCTCGAGGGGTAGGGTGAACGGCGGGTCGAACCATGTGGAGAACGGGTTCCGTGTTGCCCCTGCTGGGG GCGATGATGTGGAGGAGGAGGATGATGAGGATGATTCCGGGGAGGAGATTGATGAGGAGGGTGGCGACGATGAGGACGAT GATGATGATGACGTTGTTGAAGTTCATGAGATTGTGGATAGTGACGACGATGATGAGGACGGTGTTGAGTTTGATGAGGA TGACGATGACGAGGATGATGAGGAGGAAGAGGTGGATAATGATGAAGGGGATTTCGCTGAGCCGGAGAGTACTGGGAGGT TGACTAGCACTGAGGGCGAGATTGATGGTCATGAGCAGGGGGAGGAAGATGGGGACGATGATGACATCGGGGAGACTGGA GAAGATGAGATGGGGATAGAGGAAGACGATGGAGAGTTTGAAGATGATGATGAAGTGAGATAACCCTTCTTACCTACTTT AATTTTTGTTTTGTTGCATGCATGCATGATTGTTTAGTTATTTTTTAGTTATGTCTTGTGATTTAACACTCATTATTTTG GTAATTGTTTTTGTTGCTGTCAGATTGCTGAAAAGGAGGTGGATCTTTTGAGTGATCTTGATGTTAATATGATTATGTTG GATGATGTTTGTCAACTAGATTTGAGCTTTGGTCTGTTTGGTTTATTTTTCCTTGCGTTATGTGATTATTCTTGCTGTGC TTAGGATTTGAGCTAGGTTTACTTTTGCCAGTTTTGTGCTTGAAAAAGTAGAGTTTGTTCCTCTTTCACTTTAGTCAGGA TTCTATTGGTGATATTTAATGTCCTGTACTAATTGCTATTGATTTATAATATGCTAGTTCTGACACTTGTCACTGCCACA ACTGATGAACAGTATATATTTTTAAGTGTGCGTTTAATTTGATCTTCTGTGATTTGCATATTTGTATTACCGGCTTCTGG TTCAAATGTTGTTTTTAGTGTTTACTAATCGCTTCTTCTTTGGTTTTCATTTTTGCATGAGTCCCAACTATGTTCTCAAT GCAGGAATTAAGATTTTAATTGAATTGCTTTGTGGTCAGGGGAGCAGTTTTAGCTGATATTGCAGTTTTGAAATTAATTA CTTGGTTTGCTATTTTGACTAGTAGAAAGTTTCAGAGTTTGTGGTTCTGTATAATTCTTATATTTTACATGGTGGAATTT CCTATGTTTTGTGTTGGAGGTGCCATCTTGTGCTTAGTATAGTTTTTGACTGTCTTTTCCATTAACAAATATTTGCCATC CTGATTTGCAACAATTAGGTTGCTACAGAATTATTTTCTTCTAATTATTTTTCTTTTGTTTTTATGCCTCGGACTGCATG GTTTTTCACTTTTGTTTTGGTTCGTAACAATTAACATAGTAGGAAGGGGACTTATGAAAGTAACATACTTGTTGTCCTTT TCCTGTGTTTAGGATTTATGTGCAAGGTCACATACTTGTATTATTTGCTTAATTGACTTTTTTTCTGTGATTCTAGTGTT TCCGTATACTGCTTCTGTTCTGCTGATATTTCTGAAGTTTTGCAACTAAGATAACATAGTTTTGGTGTTTCTTTGTACTT ATATTTTGTTTTTGTTATGATCTGGATAAAGAGTGTTCCTATTTTAGTTTTTCTGAATCTTAAACTGTAATGAAGCATGC GATTTTTATTTGCTCTACCAGAACTAAACCAGTCTATCAATTGTTATTTGATTAGGGTAGTAGAAATATAATAATGCTTG GGTTATATCCTATTACTGTATTGTATTTAATTAGAATAAAATATTTTTTTACTGTCTGCTTTAGTTTCTTGTCCTTTTTT TAAATTGTTCTTGATTCTATGTCAGCTTAGCTTGTTAACTGAACTATGGAATTTTTACTGGAATTGCAGGAGGATGACTA TGGTGGCGGATATCTTGTTCAGCCGGTTGCGCAGTCTGAGGCTCTGAATACTGCTGATGTTGCTGACGTGGATGATGTAA ATGAGAATGGTGAAGAGGAGGAGGAAGAGGAAGTTGACGACGACGATGATGATGTCCAGGTGCTGCCTGCTGCTGCTACC TCTTCACACCCGAAAAGGAAGAGGGATGATGATGCTGATGACAGTGAAGAAGAAGATGAAGATGATGAAGACGTGGTAGC ATTCTCAAAGCCGTCAAAGAAGCATCATTGACCCTGGGTTATAATTTATCTGATTTTCGTGTTCTGTTGTTGATGGCTTC CAAGTACTGGAAGCAGAGAAACCTTAAAACCTCAGTGTTAGATAGAACAATGGATAGTTGTTAGGGATTTAGCTCTCTTG GACAGAGGACATATTAGGAAAAAAAGAATTGTATGTTGTTGGGTGGAAATATGTTGAAGTTCAAAAAGTGGTTAGTGTTT TTCCCTCGTTGTTGCCTTGCCTTTGACATATAGCCGTTGTTGTTCTATTAAATATTCAAATGGCAGTTATCAGAGGTTTA CCGCTCAATCATGTGATATTGGCTTGTAAAGGAACATGGCTGGTTCTGGAGGGAGGGAGGGAAAGAAGAAGAGGTGGGAA AACCAACCTTTCAAAATGTTTTCCTCCAAATCTCTAATTGTTTATTGGGAGCACTTTTTTTGGAGGGAGAAAAAAGGAAA AAGCTTGTAAAACAACACATGTAGATATAGCTCTTATGAAAATGATGATTCCGATCAATCAAATTGGGTGCCTGTTGTAA TGACGTGGCTAGTTCCCATAAAATTGTTGTCATTGTTACGTGGAATTCTTCTAGTTTTTATCTTAAATATTTATTGAGCT TGATGACAGCAATTTGGAAATGAAATCTTGCTTTGCTCCCATTGTAATATTTAGTCAAATGTTCCAATGGGCCCCTAGAT CTGTGGATCACATTGTTTTTATCTAACAAATTGATGGAATTTTAATGCTTTTATTATCTCCTCAATAAGCATTGGTAGTT CTCATCATGGATGAATATGATACAACCGCGTTTAACGTCTTGCCACGTGGTTCTAATTACTTTTTGATTTTTTATTGGAC GGTGAGATCAGCATTAGAGTTCATGCCGTTGGGTTTTCTTTTCCATTCTCTTTTTGGACCAATTAGGGTACGAATTAACT TGCCACTCTTAGGAT
CDS sequence (LotjaGi4g1v0116100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATACAGAGTTTCGTATTTGATGGATGAGATCTGGGAGAGGGCCGTTGAAACGGCGTTAGAAGGCGAGAAGGATGA TGCTTCGACGCGGACGCTAACCCTAGACGGCGCCGTTAAGTGTGTTCAGGGGCGGTTACCACCACCGAGCCTTCTAGAGA GGTTCGAGAATCTTCAGCATCTGTCGATAGCAAACGTCGGCGTTTCGTCGTTGGAGCAGTTCCCGAGGCTGAGGAGTTTG CAGAAGCTGAACCTCTCTGACAACCGCATCGCCGGCGGGTTGGAGTTTCTGGTGCAGGCGGGGCTGGACTCGCTGCGGGA TCTTGATTTGTCGAATAATCGGATTCAGTTTATTGAGGATCTTGCGCCGTTGGCGGAGGTGAGGTTGGTGTCGCTGGATC TGTATGAGTGTCCGGTGACTAGGGTGAAGGATTATCGATCTAGGGTTTTCGGGTTGATTAAGTCGCTGAGGTTTCTGGAT AAGATGGATGCGGATGGGAATGAGAGGCCGGAGTCGGATGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGGGGAGGA GGAGGATGATCCGGGGAGTGGGGAGATTGATGGCGAGGAGGATCGTGGGTTTGGGGTGAAGAATGGGCATGTTGAAGGGG CTGATGGTGTTGTGGATGCTGATGATGATGAGGAGAGCGATGCCGATGAGGAGGAGGTGGAGACCTCGAGGGGTAGGGTG AACGGCGGGTCGAACCATGTGGAGAACGGGTTCCGTGTTGCCCCTGCTGGGGGCGATGATGTGGAGGAGGAGGATGATGA GGATGATTCCGGGGAGGAGATTGATGAGGAGGGTGGCGACGATGAGGACGATGATGATGATGACGTTGTTGAAGTTCATG AGATTGTGGATAGTGACGACGATGATGAGGACGGTGTTGAGTTTGATGAGGATGACGATGACGAGGATGATGAGGAGGAA GAGGTGGATAATGATGAAGGGGATTTCGCTGAGCCGGAGAGTACTGGGAGGTTGACTAGCACTGAGGGCGAGATTGATGG TCATGAGCAGGGGGAGGAAGATGGGGACGATGATGACATCGGGGAGACTGGAGAAGATGAGATGGGGATAGAGGAAGACG ATGGAGAGTTTGAAGATGATGATGAAGAGGATGACTATGGTGGCGGATATCTTGTTCAGCCGGTTGCGCAGTCTGAGGCT CTGAATACTGCTGATGTTGCTGACGTGGATGATGTAAATGAGAATGGTGAAGAGGAGGAGGAAGAGGAAGTTGACGACGA CGATGATGATGTCCAGGTGCTGCCTGCTGCTGCTACCTCTTCACACCCGAAAAGGAAGAGGGATGATGATGCTGATGACA GTGAAGAAGAAGATGAAGATGATGAAGACGTGGTAGCATTCTCAAAGCCGTCAAAGAAGCATCATTGA
Protein sequence (LotjaGi4g1v0116100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRYRVSYLMDEIWERAVETALEGEKDDASTRTLTLDGAVKCVQGRLPPPSLLERFENLQHLSIANVGVSSLEQFPRLRSL QKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLAPLAEVRLVSLDLYECPVTRVKDYRSRVFGLIKSLRFLD KMDADGNERPESDDEEEEEEEEEEGEEEDDPGSGEIDGEEDRGFGVKNGHVEGADGVVDADDDEESDADEEEVETSRGRV NGGSNHVENGFRVAPAGGDDVEEEDDEDDSGEEIDEEGGDDEDDDDDDVVEVHEIVDSDDDDEDGVEFDEDDDDEDDEEE EVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDDDDIGETGEDEMGIEEDDGEFEDDDEEDDYGGGYLVQPVAQSEA LNTADVADVDDVNENGEEEEEEEVDDDDDDVQVLPAAATSSHPKRKRDDDADDSEEEDEDDEDVVAFSKPSKKHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 246 | 238 | 7.1E-73 | – | |
| PANTHER | 9 | 246 | 238 | 7.1E-73 | – | |
| Gene3D | 12 | 178 | 167 | 1.2E-33 | ||
| SUPERFAMILY | 48 | 165 | 118 | 1.87E-20 | – | |
| ProSiteProfiles | 57 | 78 | 22 | 5.748 | ||
| Pfam | 64 | 173 | 110 | 7.3E-13 | – | |
| ProSiteProfiles | 79 | 98 | 20 | 6.811 | ||
| ProSiteProfiles | 104 | 125 | 22 | 9.722 | ||
| MobiDBLite | 163 | 475 | 313 | - | – | |
| MobiDBLite | 169 | 196 | 28 | - | – | |
| MobiDBLite | 217 | 231 | 15 | - | – | |
| MobiDBLite | 259 | 329 | 71 | - | – | |
| MobiDBLite | 347 | 387 | 41 | - | – | |
| MobiDBLite | 410 | 432 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0116100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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