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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0118100 |
| Transcript ID | LotjaGi4g1v0118100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT1G75220.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9FRL3|ERDL6_ARATH Sugar transporter ERD6-like 6; TrEMBL-Plants: tr|A0A151SET4|A0A151SET4_CAJCA Sugar transporter ERD6-like 6; Found in the gene: LotjaGi4g1v0118100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17081457..17086491) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTTTCAGGGAAGAGAGTGGCGAAGGTAGAGGAGACCTTCAGAAACCGTTTCTCCACACGGGAAGCTGGTACAAGAT GGGTTCACGCCAATCCAGCGTCATGGGTTCCACCACCCAGGTCATGCGTGATGGCTCCGTCTCCGTCCTCTTCTGCGTCC TCATCGCCGCCTTGGGTCCTATTCAATTCGGCTTCACCGTCCGTCTCTTCTTCCCTTCATTTCCAATCTCTTCCATCATC ATCGCCGCTAAAAGCTTTTTTGTTTTTTTTTACAGTGTGGGTATTCTTCTCCGACGCAAGATGCTATTGTCAGCGATCTG AAGCTCTCGCTTTCTGAGGTTTCTACCTATTTTATTACTTGGGTATGGTTTAAATTCTCGTTGTTGTGATTGCTTACGAT CTTGATTGATATTGGGGATGTTGCAGTTTTCTTTGTTTGGATCTTTATCGAATGTGGGAGCGATGGTGGGAGCTATAGCG AGTGGTCAGATAGCAGAATACGTCGGGCGAAAAGGGGTATGTTTTGTTTTGCATGATTTGTTTATCTGTTTTGAACTAAC TCTATTGAAGGAATGACTCTGAATGTGATGATTGGTTTGATTTGAATGTTGTAGTCATTGATGATTGCTGCAATTCCCAA TATAATAGGGTGGCTCGCCATTTCTTTCGCGAAGGTAAGAGATCTTTGCTTTTAATTGTGTAATCTATGATATGGACTTC TTTCTGGTTTTGTTTGTGTGATTTAAGTTTGTTGCCTAAAATGGGGGTGTTGTTGCTTCTATAGGACTACTCGTTTTTGT ATATGGGGAGGTTGTTGGAAGGATTTGGCGTTGGGATTATTTCTTATGTGGTAAGCTTGACTGCCCTATTTGATCTTTTC ACTTGTTGGTTCTATTTGGAAACATTGCTGAGTAAGAGCTGTCTGTGAACTGGTTTTTCTTCTGTTTAGGTGCCTGTGTA TATAGCCGAGATAGCACCTGAAAACTTGAGGGGTGGCCTTGGATCGGTGAACCAGGTTAAAAAATTGTTGTTGTGTCTGG ATGCTGAGCTCATCTCTTATTTTTCTGTTCCTTCTTGTTTTAAATTTGTAATCTATTATTGATTATTCATGTAATTTGTC TGCCTCAGCTCTCTGTTACAATTGGAATATTGCTTGCTTATCTGTTGGGCCTTTTTGTCAACTGGAGAGTGCTTGCAATT TTAGGTAAAACCCTAATGATTTGATTGGCTCACTTTTTGTGGATAGAAAATGGAGCTTCTAAAATAAGCTTGGTGTTTAC AAATCAGTTCCATTAAGTTTCACATAAATAAATACACGGAGAATATTTGGTTGGTATGTGTACAGGGGAGAAGCTAGATT TATAAAATAAAACAGGGCAGTCATTGGGGGGGGGGGGGGTAAATTCGGCTCGAGACACAACATTCAGAGATAATTAGTGT ATTTTACTCCTTGTTCTTTAAAACAAATGTAAAGTTTGATAGATTATGGATAGTGGGTCAATCTTTCATAACATAAGGCA TTCACTGCAATTAAAATATTAACAGTAAATATTTTTTGCTCCGTTGCAGGAATTTTGCCTTGTACAATATTAATACCTGG ATTATTTTTCATACCAGAATCTCCTAGATGGTTGGTATGGATCTTATGTTATGCACTATACTGATTGAATTTTGGTACCT TTCATCTTTGTTAATAGTCACATTCCATCCATAAAAGGGATTGTTGTAAGACATTCTAGACTTACTTATTTTCTTCTTCA TTTTTTACTGAATTTGTGGGTCATTGGGGAGTTATAGGCCAAAATGGGAATGACAGAGGAGTTTGAGTCTTCTTTGCAAG TGTTACGAGGATTTGACACAGATATTTCTGTTGAAGTACATGAAATCAAGGTATTTGGCTCATTGCCATGTGGCTAAATT TTGTTAACCATGCCACATATATGATATTAAGCATATATGAGGTGCTGTTCAGAGTATAATTTTGAAATATGTGTTTAAAA CATGCACTGCTAACCATTTTGTTTTTTTCTAGAGATCTATAGTACCACGAGGCAGAAGAGTTGCAATTCGGTTTGCAGAT CTCCAAAGGAAAAGATATTGGTTCCCGTTAATGGTATCATATAATCCCTTCTTTGTTCTGATCATGCGAACACTCTCTTC TCAAGCCTGTCCTATTGAAATTTATCTGAAAAGTAAAACTTCTAAACTTTGGTTTACTGAGAACCTGCAGGTAGGAATTG GATTACTTGTACTTCAGCAATTGAGTGGTATCAATGGAGTTTTGTTCTATTCTACTAGCATCTTTGCAAATGCAGGTTAT GATTATAATTGATGACCCGTTCCCTCTATTATTGTAATAAGTTCCCAAAAATTTGTAACTATTTTGTTTTAAGCACTTCT GTTTGTAATACTTAGTCACTGCTCTGTCATTCGAGCAGCCATGTCCAAGGCTGCATAATTAGTCTCCACGACATCCACCA TCCAGGTAAGGGAACAAGTCAAAAGTCTTAAATTTGTACATACCAGTGCTCTATCCTTCCGGAAGCTTTTCATCCTTTTT CATGAGTTTCCATCCTGGCAGAAAATTACCTTCAGATATCACCCACATTTTGTCACTGAAGCCATGTGTGGCTATGTGTT TGAGAAGCTTTTCTGACAAAAGTTTGCACTTTCATGGCCCGCTTTGCCATTCTCTGTCCAGTTCTGTCCTCTGCCTCATC TGGTATCTGGCTTGTTGTCTACCTTCGCACGATACCTTCTCGATCTTTGTTTCGGCTCTTGTATGGCTCTTTTCCTATGC TAGTCTAGCCTTGATTTTCTTAGAAGTAACAGCCTGGCCTCGATTTGTCCTACCTACTACATGCGATCTGACCCTGAATT TGTCTAAAGTCTGACCGTCATCAGTCTTTGACTGTCTTTGTCCTAGAAGCAGTCCTTGCTGTCTGATCCTACCGGTTTTC AATATGTCAAGAACCAATTATCCCAAAAGTTTAAGCTGTTGGGTAAAGGACTCTGAATGGTTTTATATTATATTTGTAAC ACACCCCCTCACGCAAGAGCCCAGTTGGGCTTGAAGTGTGGACAATGCGCTCATCTACCATGTGCTGAAATTCCACTTTT TATCATAATAATTGGGGGCGGCAAAGATTGAACTAGACGACTTAGTCCTAGAGACTCTTATACCATGTCAAACAACCAAC TATCTCAAAAGCTTAAGTTATTATTTAAAGGACTCTGAATGGTTATATATTTTATTTCTAACACGCCCCCTAGATCAGAG CCTATCCTAGATCTGTTATGTGGAGACCACCCATATGTGGGCCACCTGCAGATGTTCATTTCTACATATCCCATGCTCCA GATGTCCAGCCCTGGGCATGAGGGGTGTCTTGAGAAGTCTCACATTGACGATAGATATGTCTAAGATAGCCCTTATATAT GGGAAGACAATCCTCAACTCTTGGGCTAGCGTTTGTGGTTGAGTTAGGCCTCCCAAATTCTAATACAATCCATAATCTGC CCTTGTTTCCTTCCCCGATTCATCTGGTGTTTTCACTGACATATATTCATTGAATTTTTTTTACTAATGAGTCATACAGT GATGAATTGGCTGTAGACCAGATTAGTGTCTCATTTTGATTTATACCAGTAGTGATTTGTCCTATCTCATTGATGTCTTA TGCCAAAAGTTAATTCTTGTTGGGCTCTTGGCTGTTATATACACCGTCAGCCGCCTTTGAAGAGTATAGAGGCTCGATAC CATGTCATGAATTAAGTATTCCAAAAGCTTAAGCTGTTGAGTGAATGAATTTAAATTATATTTCTAACAGATGACGACTG TAACCTGAACCTATTTTGATATTTGACTTCCTTATTTTAACAGGAATTTCATCCAGCAGTGCTGCTACTGTTGGACTTGG AGCTATTCAGGTTGCATAATAAAGCCCGGACTACGTATTTATCATGTGAATAGTTTGATAGCAAATTCAGTTCTCATAGT CACCTTTCTTTTCTAGGTCATTGCAACTGGAATCTCCACTTGGTTGGTGGACAAAAGTGGTCGGAGGCTGCTTCTATTAG TGAGTAGATGCAAAGCTCATTAATCCATAAGAATTTTCTATTATACTGAAAGATCCAAATGGAATTTAATTAAATTTGAT ATATGTTATCTCTTCTACAGCTATCCTCGTCTATAATGACAGTTAGCCTTGTCGTTGTTTCTATAGCATTCTATCTGGAG GTTGGTACTAGCAATGGTAATAGCTAAAATTCATTTCTAGGAGCTTAACTATGCTTTTAACTAGTTTATTTCATTGATAC CAGGGTACCGTATCAGAAGATTCACACCTATACAAAATTTTGGGAATAGTTTCTGTTGTTGGCCTTGTGGTATGTTACTT GGGCTCGGTTGGACTTTTTTCTTGGGCAATTCAAGATTTTTGGTACTCATAAGTTTATCAACATTTTATTTTGTAGGTTA TGGTAATTGGATTCTCTCTAGGACTTGGACCAATCCCTTGGGTTATAATGTCTGAGGTATGAAATGCTTTCAGTATTCAA AACAAATATAATCTGAAGAAGGATCAAGCATTTGTTGCATCCTCTTTAGTCAATGCCTACATCAAGGTTTTCTTGTTAAT GTTGCAGAACTTGAATCAACATTGAATTGTAGGTCTCTCACATGCTAATCATTCTTTTCAGATACTTCCAGTGAGTATAA AGGGCCTTGCTGGCAGTACAGCCACCATGGCTAATTGGTTGACTTCATGGGCGATCACAATGACTGCAAACCTGCTTTTA ACTTGGAGCAGTGGAGGTGTGCATAGTGTTTGCATCTTCATGTCTATTTGGTTATATTCATGATTCGTGCATGCATGTCC TGTCAGCTTTTTGATACATTGCTAACTTATGGATTTCTACAGGGACATTCACAATGTACACAGTTGTAGCTGCCTTTACC GTTGTTTTCACGGCATTGTGGGTCCCTGAGACCAAAGGAAGAACATTAGAAGAAATTCAATCTTCCTTCAGATAG
CDS sequence (LotjaGi4g1v0118100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTTCAGGGAAGAGAGTGGCGAAGGTAGAGGAGACCTTCAGAAACCGTTTCTCCACACGGGAAGCTGGTACAAGAT GGGTTCACGCCAATCCAGCGTCATGGGTTCCACCACCCAGGTCATGCGTGATGGCTCCGTCTCCGTCCTCTTCTGCGTCC TCATCGCCGCCTTGGGTCCTATTCAATTCGGCTTCACCTGTGGGTATTCTTCTCCGACGCAAGATGCTATTGTCAGCGAT CTGAAGCTCTCGCTTTCTGAGTTTTCTTTGTTTGGATCTTTATCGAATGTGGGAGCGATGGTGGGAGCTATAGCGAGTGG TCAGATAGCAGAATACGTCGGGCGAAAAGGGTCATTGATGATTGCTGCAATTCCCAATATAATAGGGTGGCTCGCCATTT CTTTCGCGAAGGACTACTCGTTTTTGTATATGGGGAGGTTGTTGGAAGGATTTGGCGTTGGGATTATTTCTTATGTGGTG CCTGTGTATATAGCCGAGATAGCACCTGAAAACTTGAGGGGTGGCCTTGGATCGGTGAACCAGCTCTCTGTTACAATTGG AATATTGCTTGCTTATCTGTTGGGCCTTTTTGTCAACTGGAGAGTGCTTGCAATTTTAGGAATTTTGCCTTGTACAATAT TAATACCTGGATTATTTTTCATACCAGAATCTCCTAGATGGTTGGCCAAAATGGGAATGACAGAGGAGTTTGAGTCTTCT TTGCAAGTGTTACGAGGATTTGACACAGATATTTCTGTTGAAGTACATGAAATCAAGAGATCTATAGTACCACGAGGCAG AAGAGTTGCAATTCGGTTTGCAGATCTCCAAAGGAAAAGATATTGGTTCCCGTTAATGGTAGGAATTGGATTACTTGTAC TTCAGCAATTGAGTGGTATCAATGGAGTTTTGTTCTATTCTACTAGCATCTTTGCAAATGCAGGAATTTCATCCAGCAGT GCTGCTACTGTTGGACTTGGAGCTATTCAGGTCATTGCAACTGGAATCTCCACTTGGTTGGTGGACAAAAGTGGTCGGAG GCTGCTTCTATTACTATCCTCGTCTATAATGACAGTTAGCCTTGTCGTTGTTTCTATAGCATTCTATCTGGAGGGTACCG TATCAGAAGATTCACACCTATACAAAATTTTGGGAATAGTTTCTGTTGTTGGCCTTGTGGTTATGGTAATTGGATTCTCT CTAGGACTTGGACCAATCCCTTGGGTTATAATGTCTGAGATACTTCCAGTGAGTATAAAGGGCCTTGCTGGCAGTACAGC CACCATGGCTAATTGGTTGACTTCATGGGCGATCACAATGACTGCAAACCTGCTTTTAACTTGGAGCAGTGGAGGGACAT TCACAATGTACACAGTTGTAGCTGCCTTTACCGTTGTTTTCACGGCATTGTGGGTCCCTGAGACCAAAGGAAGAACATTA GAAGAAATTCAATCTTCCTTCAGATAG
Protein sequence (LotjaGi4g1v0118100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFREESGEGRGDLQKPFLHTGSWYKMGSRQSSVMGSTTQVMRDGSVSVLFCVLIAALGPIQFGFTCGYSSPTQDAIVSD LKLSLSEFSLFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLAISFAKDYSFLYMGRLLEGFGVGIISYVV PVYIAEIAPENLRGGLGSVNQLSVTIGILLAYLLGLFVNWRVLAILGILPCTILIPGLFFIPESPRWLAKMGMTEEFESS LQVLRGFDTDISVEVHEIKRSIVPRGRRVAIRFADLQRKRYWFPLMVGIGLLVLQQLSGINGVLFYSTSIFANAGISSSS AATVGLGAIQVIATGISTWLVDKSGRRLLLLLSSSIMTVSLVVVSIAFYLEGTVSEDSHLYKILGIVSVVGLVVMVIGFS LGLGPIPWVIMSEILPVSIKGLAGSTATMANWLTSWAITMTANLLLTWSSGGTFTMYTVVAAFTVVFTALWVPETKGRTL EEIQSSFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 44 | 44 | - | – | |
| PANTHER | 29 | 487 | 459 | 1.5E-268 | – | |
| PANTHER | 29 | 487 | 459 | 1.5E-268 | – | |
| TIGRFAM | 32 | 483 | 452 | 5.3E-92 | ||
| Gene3D | 44 | 488 | 445 | 1.7E-120 | – | |
| Phobius | 45 | 65 | 21 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| SUPERFAMILY | 50 | 484 | 435 | 9.81E-54 | ||
| CDD | 50 | 482 | 433 | 5.5871E-167 | – | |
| ProSiteProfiles | 52 | 476 | 425 | 44.13 | ||
| Pfam | 53 | 487 | 435 | 4.3E-98 | ||
| PRINTS | 60 | 70 | 11 | 5.1E-19 | ||
| Phobius | 66 | 84 | 19 | - | – | |
| Phobius | 85 | 105 | 21 | - | – | |
| TMHMM | 88 | 110 | 23 | - | – | |
| ProSitePatterns | 106 | 123 | 18 | - | ||
| Phobius | 106 | 116 | 11 | - | – | |
| Phobius | 117 | 135 | 19 | - | – | |
| TMHMM | 117 | 136 | 20 | - | – | |
| Phobius | 136 | 140 | 5 | - | – | |
| Phobius | 141 | 164 | 24 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| PRINTS | 143 | 162 | 20 | 5.1E-19 | ||
| ProSitePatterns | 148 | 173 | 26 | - | ||
| Phobius | 165 | 175 | 11 | - | – | |
| Phobius | 176 | 194 | 19 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 195 | 199 | 5 | - | – | |
| Phobius | 200 | 221 | 22 | - | – | |
| TMHMM | 202 | 221 | 20 | - | – | |
| Phobius | 222 | 280 | 59 | - | – | |
| Phobius | 281 | 300 | 20 | - | – | |
| TMHMM | 282 | 304 | 23 | - | – | |
| PRINTS | 295 | 305 | 11 | 5.1E-19 | ||
| Phobius | 301 | 319 | 19 | - | – | |
| TMHMM | 319 | 341 | 23 | - | – | |
| Phobius | 320 | 341 | 22 | - | – | |
| Phobius | 342 | 347 | 6 | - | – | |
| Phobius | 348 | 370 | 23 | - | – | |
| TMHMM | 348 | 370 | 23 | - | – | |
| Phobius | 371 | 381 | 11 | - | – | |
| Phobius | 382 | 410 | 29 | - | – | |
| TMHMM | 385 | 407 | 23 | - | – | |
| PRINTS | 389 | 410 | 22 | 5.1E-19 | ||
| Phobius | 411 | 429 | 19 | - | – | |
| PRINTS | 412 | 424 | 13 | 5.1E-19 | ||
| TMHMM | 414 | 436 | 23 | - | – | |
| Phobius | 430 | 448 | 19 | - | – | |
| Phobius | 449 | 453 | 5 | - | – | |
| TMHMM | 451 | 473 | 23 | - | – | |
| Phobius | 454 | 472 | 19 | - | – | |
| Phobius | 473 | 488 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0118100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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