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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0121900 |
| Transcript ID | LotjaGi4g1v0121900.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor kinase, putative; TAIR: AT1G63430.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430; TrEMBL-Plants: tr|K7K566|K7K566_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0121900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17608744..17614633) extracted from Lotus japonicus Gifu genome v1.2.
TCAGATATCGTCTCCACGGCCTATCTTCCCTAATTTCATCTTCACAGCAGGTTAGGTCTGAATCCTCGGCTGCCATTATT CCCTCATCACCATCTCAGGTATGTTCAAGCATGATTTTTATTTTATTCGTTTTCAAAAAAATTAGGTGATTGATTCATTT CCTTATTAGATGCTGAAATTGTTGATTAGTTGTCTTATCTGCATCAATTAAGTGATTAGTTGTCTTACTGTAATTATTAT TTTTCTCAATAATTAGTGTTTTTGAATTTGAATTTTTTCTTGACCTGAAATTACTCCCCTTATCAAGCCTTAAAATTATA CTCTCACCCTAAATAACCTCCTTGCCTTATTAATTAGTGATTTTGAATTCAAATTTCCCTTTACCTTAAATTACTCCCCC TGTCAAGCTTCAATTTATTGAATTTTTATAGAGATGAAAATTCAGGTTGAGGATTATATTTTAGGCTATATATTTAAGCT GAAAGTCTCTTTTGGATTTCAATTTTTTAGGCCACGCTACATTCATATTTCAAAGAAACATTCAAAGAATCAAGGATGTG GAGGGTGTGAGCATTTCCTTTATGCATGTGTGTGCTCTTGCCATTGCAGGATTATGGTAACCAGGTCAGCACTACTCCTA GCAAAATTAAGGTCAGCTGCTTCTACACAATTAACAGGTCAACAAATATAATATGGCTTATTAATATGAATCCATTCAAT TCCTGTAGCTTGGACTGAGGTTGTATATTGTTGCTCAGTATTACTTAGAGAATGAAGATGAGGCAGAAAATCAGCAATAA AGGGGTGGTTCCTTTAGTTTTGACATTAAAGCCATCTTATGGTGAAAGGGAAAGGAACACTATAAATCATTATGGGTGTG TTTCTCCCTTCTTTTTTAGCTTCCCTCATCAGTTTCTCTATTTTCCCCTTTCTTTATCCATCCAAGATTGTGGTGATGAA CTATTTTTCTCTTTCTTATCACTAATTTTTGCTTTTCTTATATCTTTGCAATTGAAGGTTTTATATCATGGTTCACTTTG ATATGGGGAGTTACCTTATGTGCTCATATGTCAAGACTTCAGTATTCAATGCTACCCCAATATTTATATATCTTATTATA TTTAAACTTTTATTTTGTTGGTTGTGTGGTGGTGTGGTATATTTGGTTTAAACCGTTATATGTTATATATGCAACTGGCT GGGTTTGTGGCTCTATGCCACTCTTTAATGCCTTAAGTCCTTGAAATTTCATACTGATTTTGATGTTTTCCTTAGTTAAT TTTTTCCTATGTTGCTTTAAGGTATGAATAATTTTCTGAAGTGAAAAGGAAAACGGATAAAAAAGAAATCCTCAGTTGCT TCAAACATTTGAAGATTATGGTGATGAAGATGACATCAACTTTGATAAACAGGTACCTTTTTCTACACATCCATCCATCC ATAATATATACATTTAGGAAAAGATCTCAGCACAGTCATCGCATACGTGGCATCTACTGATTGGTTAATATCATGAAAAA TCCTACATGGCACTCAATCCTTCATTCTTCTTATCCTACACCTTTTTCCTAATCCTTCACTCATTTCTCCTTAATCCCCT CTCTCATAAGCGTAACATCCTCTGGCGTTTCAACCTTCAAGTTCATCTCTTCCAGAATTTCCTCAGCGTCTTTGATTTTC ATATTCAAAAGCCCTAGAATCCGAAATCAACAATCGCAGCTCTCATTCAATCGTATCTCTCATGGCCCCTTCCAATTCAT GAGTTCTTCGATCGCATCTCTCATGGCCCCTTCCAATCGCATCTTGAAGCCTCAAACGTTGGGAGGGAGTAAAACCTTAA AACTGCTTGCTACGTTTGGTCTCTCTGCATAATCTTATTCCAGGTTGTTGTTCAGCCACTAAAGTTATAATCTGTAAGTA TTTTTTTCTCAAATTTCAAAGAAAGTTTCAATTTTTAGCTTGAATTTAATTTTTTTTTAGTTGGGTTCTTCAAATTTGCT TCTATTTCATGTAGGATTTTGGGTTGTGCATTTTCGGTTCCTTTTTTGAGTCTGTGAAAATGGGTTTTCTTTCTGGGATG TTTATGGGTATACTGTTTGGCATAGAATTGATGGCAGCATGGGAGCGGATGAATTAGTCCCGAAGTGCGTTCCTATCATC AAAGTTCCATGAACCAAATCGCCCCTCCCGGCCTCATTCCTATCCACGGCAGATTCTAACCATTCTTCCCTTCAATCACA TCTCTCACAGCCTGCTCCGATGAAGCATTGTGGTAGAAACCTGCAGTCCAACGGGTTGAGTGGTACGCTGCCTCCGGAAC TATGATTCAAATAAGAATGGGATTCCTATGGGATTCAAATAAGAATGGTGAGTGTAATTTTTATTGTTGAATTGTTATGG TTTGGTTTTGAGGATTCCTATTCTTTATAGGAGCCATTCAGTATCCAAAGGGGTTGCATTAGGGAGATTCAAAACTGCTA TGGCTAAAAAGCATATAGTCAGGCTTAGCACTAAGTCTTTAAAATGCCCAGTTCCACCTATCAAACTTTGAATTTTATTA ATCTGTCTCGATAATTTCATCAGGTATGCATCAGAGGAGAATATAACTGGCTTCTGTAATTCGTCTCAATTAAAAGTAGC AGACTTTTCATATAATTTCTTAGTTGGTAGCATACCAAAATGCTTGGAGAATCTTCAAAGGTACTTTTCTGATTCCCTGG TCAATTGCCATTCTGCTCTTCGACCATATTTAGAAAACATGTACTCTGTCAAACAGTTTAAGCTATCAAGGGAACTGCCT GCAGAGCAAGGACATCAAGCAGCGGCCTTCGATGCAATGCGGTATGTGTGACGCGACCTTTTTAGCATTCAAAATTTAAG GTATGCTTTAGGGTGTGTCTTCATAGACATCTCATAAAATTTGAATCATGCTGAAGAAATGAAGTGAGCTCAGTCTCGAC TTTATTGTGAAGTGGCTTTCACTGGGATTCACTTTGTATTCCTTTACTAAAACCCAACCTGGTGTTGGGACTTGGAAATG AATCTATGTAATATTTGCAAATAATGTGAATTATGTCAAATCCAGTATACACTGGATGACACTCTCTACCTTGAATTGCT CCTTCTTAATTTTGTAAATAACACTGAACTATTATTTTATAGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAAC CCAAACCACCAACCTACTGAACATATGCCCAAGCATCATGGATCATCAAAACCTTCTTGGCTTTTAGCTATAGAAATAGT AATGGGAACTATGGTCGGTTCTCTCTTTCTGGTTGCTGTTCTCGCTGCTTTCCAGAGGTGTAACAAAAAATCAGCTATCG TTATTCCTTGGAAAAAATCTGCAAGCCAGAAAGATCATATGACAGTTTATATAGGTAAATTTTCTTTGTATTATCTTTTC TATTTACATCATATAGTTCTTGAGCCGCTTTTAACATATTTGGCTTTATTAATGTGCAGACCCTGAGATGTTAAAGGATG TGAGAAGGTATAGCAGACAAGATCTTGAAGTGGCATGTGAAGACTTCAGCAACATAATAGGGTCCTCACCAGACAGTGTG GTCTACAAGGGGACCATGAAAGGTGGGCCTGAGATTGGTGTAATTTCCCTCTGCATTAGGGAGGAGCAATGGACAGGGTA CGTTGAACTCTATTTTCAGAGAGAGGTAAATGGAAACATTCCAATAACTACCGCACACAAGAGTTGACAGACAATAGTTG TCCAAGTTTTTAAATATTTATTATGCTATTGATTTCTTTCAGGTGGCAGAATTGGCTAGGCTAAATCATGAGAATACTGG AAAATTACTGGGGTATTGTAGAGAGAGCACTCCGTTTACAAGGATGTTGGTTTTTGATTATGCTTTAAATGGGACCCAAA ATGTAGCAAAGTCAATGGCGAAGTACCCAAAACCCATCACCGATTAGCCTCCATTTGCTGCTGTAGTTTTGACTTGATTA GCCTCCATTTGCTGCTGTAGTTTTGACTTGAACCCCATCACCGGTACTTCATAGGTAAGTTTGTTGAGGGAAAATCTATC AGAGTATTAAGCTTGCCTACACTCTGATATACATTCATTCGGTTTATTTCAGGAACCATTTGATTTTATAGTAGCAGCTC TTGCAAAGTTTGTTGATTCAGAACCTGAAGGTTTTCATCCACCCCGAGGAAGACATATCTTGGCTGGATTTTACGTTCTC ATTCCCAGTGAAGCAAACAAAGCAAGTGCACCTGGGAATCTAATAAGGTGGACTGAGGGTTTCCATATGAAGATACAGTA ATTCTCTTTACCTTGATTATGTTTTCAATTTTTTTTTATTGAACATCTTTCATGCTGTCATTTTATCTTCATTATATTGT GATGCATCTGAAGACTTCCACGAGTCTGTCTCGGTTTCACATACACACTAGCACAATCCTTTTTGCTTCTGTTAAAGGTA TGCTTTGGTATTGAATGAAAACAGAGAAACTAAAGGGATAAGGAAGAGAATGGAAGAGAGTTAGGGGGTTATAGAATGAT TGTACTTCCATTTTATTGGGCAATTTAAAATCTTTCAAAAGTAGTAGAAGCTTGAAATTTCCATAAAGTTGAACATGGAA TGCTTGAAGCTCTCCCTTCCCCATCCTTCTCCATCCAAATCAAACATACCTCAACATTTTTTTATAAAACTCTGAATCTG AAATTACCATCACGAATAAGTGCTAATCTCAGACCACATGATGTATCACAGTTGCCTTGCAGTTCATGGTTCTGCAGACC CAGTTATCCCTGTCAAAGATGCACAATAGTTTCCCAATATTATACCTAACCACAAATTACATATCATACATCATAGTTAC ACTAAACACCAAGATGAGCTCGACTTCATTGTTATGATCATGGTTACTCATACACTTGATTCATTTCTTGATTCCAAAAT TAATTGCAATGATTTGTTTGATATTATTCTTAGTTTTCAAATTATAGATGAAAATCATGTTTCCGCCTGGGATCTTCTAC CTGACATATATAATTGTTCATCGCATTATTTGATAGTTTTTGGATAATGTAAGTTTCCTCTATTTCCTGGATCATTCAAT TGTGGAATTTAAAAGAAATAATTCTGCGTTGACTGCTTACCATTATCTATTTATGACAAGATTATCTATGCTCGTGCCTA CACTTATGAGCATCACTACAACCTCCTGCATGCTTTGGCCGCTAAAATGTTTGAAGAACCATTCAGACTTTTGGTGTGAT GTTACCGATACTGAACACAGTTATCTTCAATTGGTTTATTATGGGATATGGAGAGTTAATAAAATTGACTGATGGCAGAC TGTAGATTCAATGATTGCTTTGTTTAGGGTGGACTTTTCAGGAAAAGGAGAGCTTGCTGAGCGCCGGGTATATGAATCGG TCATTTAAATTCATTTACAACAACCTGTTCCCTTCTCTATGTCCAATTTTGCGGATATGTAAAATAACCATTGCAGCAAA AACTGGCACAAATTCATTCTCGATTGATACAGATAGCTGAGGAATTCAATGTATCAGTTTACATGACAAATCCAGGTATT CTATGAAACTTACGTGTTAATTTCCCCTCTCAAATCCCGAAACCGATAGTCTAAATGGGTTTGTTTAAAAACATTAAGCA GAAGTATTTAATTTTTGGTTTACGGCTTTTATACTACTAATGCTTCCAAATATGCCTTCTGCAATTTCAAAAATTCATTC TATTAATCAGTGATTTGACTGTTATGCAGAAGTTCAAAAACTTATGCAATGGAACGTGACTAATAGTGGTTATTCTTGGA ACATGGTTCTTTGTGCTTAAATATCTTATATAAATGGACGTATGTTTTCA
CDS sequence (LotjaGi4g1v0121900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATGCGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAACCCAAACCACCAACCTACTGAACATATGCCCAA GCATCATGGATCATCAAAACCTTCTTGGCTTTTAGCTATAGAAATAGTAATGGGAACTATGGTCGGTTCTCTCTTTCTGG TTGCTGTTCTCGCTGCTTTCCAGAGGTGTAACAAAAAATCAGCTATCGTTATTCCTTGGAAAAAATCTGCAAGCCAGAAA GATCATATGACAGTTTATATAGACCCTGAGATGTTAAAGGATGTGAGAAGGTATAGCAGACAAGATCTTGAAGTGGCATG TGAAGACTTCAGCAACATAATAGGGTCCTCACCAGACAGTGTGGTCTACAAGGGGACCATGAAAGGTGGGCCTGAGATTG GTGTAATTTCCCTCTGCATTAGGGAGGAGCAATGGACAGGGTACGTTGAACTCTATTTTCAGAGAGAGGTGGCAGAATTG GCTAGGCTAAATCATGAGAATACTGGAAAATTACTGGGGTATTGTAGAGAGAGCACTCCGTTTACAAGGATGTTGGTTTT TGATTATGCTTTAAATGGGACCCAAAATGTAGCAAAGTCAATGGCGAAGTACCCAAAACCCATCACCGATTAG
Protein sequence (LotjaGi4g1v0121900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQCAGASPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIPWKKSASQK DHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIREEQWTGYVELYFQREVAEL ARLNHENTGKLLGYCRESTPFTRMLVFDYALNGTQNVAKSMAKYPKPITD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 1 | 195 | 195 | 3.7E-120 | – | |
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 1 | 195 | 195 | 3.7E-120 | – | |
| Phobius | 36 | 60 | 25 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 61 | 210 | 150 | - | – | |
| Gene3D | 80 | 189 | 110 | 1.7E-13 | – | |
| SUPERFAMILY | 83 | 193 | 111 | 5.88E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0121900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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