Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0121900 |
| Transcript ID | LotjaGi4g1v0121900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor kinase, putative; TAIR: AT1G63430.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430; TrEMBL-Plants: tr|K7K566|K7K566_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0121900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17608948..17615114) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCTTCACCCACGCCCTCCTCCACCGCTTCTCCGTTCCGTGAATGAGCTCCTCTCAGTCTGCGCCCTCCTCCTTTGAA ATTTTCTCCCTCCTCTCTGGAAGATAAAAGGCTACGGGTTTCTTTTTTTCTGATATCACTTCTCACCTGAATTCATCTTC ACTCACACTCTGTTCTTCTAACCCTCTATCTACAACGAGTTCTTCTCAGTAACTTATCATAATCTCCTCCCTCCGTTTCG TCACCTCTGTTACCGTTGTTTGCGAGCAGTGTCGTTATCAGTCGCAGGTTTCCATTCTCAAACCATGAAATCTGAATCTT CATACTCATGGCCACTCCGAGCATCATCTCTCGCGGTCTCCCTACTCTCCACGGCGCACGGCGATGACTCAGGTATTTTC ATGTTGATTTCTTGATTTAGGACTTAATTGATTTGTGGTTTTTTTGTTTTCATTGCTTTAGGGTTTTCTATTTCTTAATT TTCAGATATCGTCTCCACGGCCTATCTTCCCTAATTTCATCTTCACAGCAGGTTAGGTCTGAATCCTCGGCTGCCATTAT TCCCTCATCACCATCTCAGGTATGTTCAAGCATGATTTTTATTTTATTCGTTTTCAAAAAAATTAGGTGATTGATTCATT TCCTTATTAGATGCTGAAATTGTTGATTAGTTGTCTTATCTGCATCAATTAAGTGATTAGTTGTCTTACTGTAATTATTA TTTTTCTCAATAATTAGTGTTTTTGAATTTGAATTTTTTCTTGACCTGAAATTACTCCCCTTATCAAGCCTTAAAATTAT ACTCTCACCCTAAATAACCTCCTTGCCTTATTAATTAGTGATTTTGAATTCAAATTTCCCTTTACCTTAAATTACTCCCC CTGTCAAGCTTCAATTTATTGAATTTTTATAGAGATGAAAATTCAGGTTGAGGATTATATTTTAGGCTATATATTTAAGC TGAAAGTCTCTTTTGGATTTCAATTTTTTAGGCCACGCTACATTCATATTTCAAAGAAACATTCAAAGAATCAAGGATGT GGAGGGTGTGAGCATTTCCTTTATGCATGTGTGTGCTCTTGCCATTGCAGGATTATGGTAACCAGGTCAGCACTACTCCT AGCAAAATTAAGGTCAGCTGCTTCTACACAATTAACAGGTCAACAAATATAATATGGCTTATTAATATGAATCCATTCAA TTCCTGTAGCTTGGACTGAGGTTGTATATTGTTGCTCAGTATTACTTAGAGAATGAAGATGAGGCAGAAAATCAGCAATA AAGGGGTGGTTCCTTTAGTTTTGACATTAAAGCCATCTTATGGTGAAAGGGAAAGGAACACTATAAATCATTATGGGTGT GTTTCTCCCTTCTTTTTTAGCTTCCCTCATCAGTTTCTCTATTTTCCCCTTTCTTTATCCATCCAAGATTGTGGTGATGA ACTATTTTTCTCTTTCTTATCACTAATTTTTGCTTTTCTTATATCTTTGCAATTGAAGGTTTTATATCATGGTTCACTTT GATATGGGGAGTTACCTTATGTGCTCATATGTCAAGACTTCAGTATTCAATGCTACCCCAATATTTATATATCTTATTAT ATTTAAACTTTTATTTTGTTGGTTGTGTGGTGGTGTGGTATATTTGGTTTAAACCGTTATATGTTATATATGCAACTGGC TGGGTTTGTGGCTCTATGCCACTCTTTAATGCCTTAAGTCCTTGAAATTTCATACTGATTTTGATGTTTTCCTTAGTTAA TTTTTTCCTATGTTGCTTTAAGGTATGAATAATTTTCTGAAGTGAAAAGGAAAACGGATAAAAAAGAAATCCTCAGTTGC TTCAAACATTTGAAGATTATGGTGATGAAGATGACATCAACTTTGATAAACAGGTACCTTTTTCTACACATCCATCCATC CATAATATATACATTTAGGAAAAGATCTCAGCACAGTCATCGCATACGTGGCATCTACTGATTGGTTAATATCATGAAAA ATCCTACATGGCACTCAATCCTTCATTCTTCTTATCCTACACCTTTTTCCTAATCCTTCACTCATTTCTCCTTAATCCCC TCTCTCATAAGCGTAACATCCTCTGGCGTTTCAACCTTCAAGTTCATCTCTTCCAGAATTTCCTCAGCGTCTTTGATTTT CATATTCAAAAGCCCTAGAATCCGAAATCAACAATCGCAGCTCTCATTCAATCGTATCTCTCATGGCCCCTTCCAATTCA TGAGTTCTTCGATCGCATCTCTCATGGCCCCTTCCAATCGCATCTTGAAGCCTCAAACGTTGGGAGGGAGTAAAACCTTA AAACTGCTTGCTACGTTTGGTCTCTCTGCATAATCTTATTCCAGGTTGTTGTTCAGCCACTAAAGTTATAATCTGTAAGT ATTTTTTTCTCAAATTTCAAAGAAAGTTTCAATTTTTAGCTTGAATTTAATTTTTTTTTAGTTGGGTTCTTCAAATTTGC TTCTATTTCATGTAGGATTTTGGGTTGTGCATTTTCGGTTCCTTTTTTGAGTCTGTGAAAATGGGTTTTCTTTCTGGGAT GTTTATGGGTATACTGTTTGGCATAGAATTGATGGCAGCATGGGAGCGGATGAATTAGTCCCGAAGTGCGTTCCTATCAT CAAAGTTCCATGAACCAAATCGCCCCTCCCGGCCTCATTCCTATCCACGGCAGATTCTAACCATTCTTCCCTTCAATCAC ATCTCTCACAGCCTGCTCCGATGAAGCATTGTGGTAGAAACCTGCAGTCCAACGGGTTGAGTGGTACGCTGCCTCCGGAA CTATGATTCAAATAAGAATGGGATTCCTATGGGATTCAAATAAGAATGGTGAGTGTAATTTTTATTGTTGAATTGTTATG GTTTGGTTTTGAGGATTCCTATTCTTTATAGGAGCCATTCAGTATCCAAAGGGGTTGCATTAGGGAGATTCAAAACTGCT ATGGCTAAAAAGCATATAGTCAGGCTTAGCACTAAGTCTTTAAAATGCCCAGTTCCACCTATCAAACTTTGAATTTTATT AATCTGTCTCGATAATTTCATCAGGTATGCATCAGAGGAGAATATAACTGGCTTCTGTAATTCGTCTCAATTAAAAGTAG CAGACTTTTCATATAATTTCTTAGTTGGTAGCATACCAAAATGCTTGGAGAATCTTCAAAGGTACTTTTCTGATTCCCTG GTCAATTGCCATTCTGCTCTTCGACCATATTTAGAAAACATGTACTCTGTCAAACAGTTTAAGCTATCAAGGGAACTGCC TGCAGAGCAAGGACATCAAGCAGCGGCCTTCGATGCAATGCGGTATGTGTGACGCGACCTTTTTAGCATTCAAAATTTAA GGTATGCTTTAGGGTGTGTCTTCATAGACATCTCATAAAATTTGAATCATGCTGAAGAAATGAAGTGAGCTCAGTCTCGA CTTTATTGTGAAGTGGCTTTCACTGGGATTCACTTTGTATTCCTTTACTAAAACCCAACCTGGTGTTGGGACTTGGAAAT GAATCTATGTAATATTTGCAAATAATGTGAATTATGTCAAATCCAGTATACACTGGATGACACTCTCTACCTTGAATTGC TCCTTCTTAATTTTGTAAATAACACTGAACTATTATTTTATAGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAA CCCAAACCACCAACCTACTGAACATATGCCCAAGCATCATGGATCATCAAAACCTTCTTGGCTTTTAGCTATAGAAATAG TAATGGGAACTATGGTCGGTTCTCTCTTTCTGGTTGCTGTTCTCGCTGCTTTCCAGAGGTGTAACAAAAAATCAGCTATC GTTATTCCTTGGAAAAAATCTGCAAGCCAGAAAGATCATATGACAGTTTATATAGGTAAATTTTCTTTGTATTATCTTTT CTATTTACATCATATAGTTCTTGAGCCGCTTTTAACATATTTGGCTTTATTAATGTGCAGACCCTGAGATGTTAAAGGAT GTGAGAAGGTATAGCAGACAAGATCTTGAAGTGGCATGTGAAGACTTCAGCAACATAATAGGGTCCTCACCAGACAGTGT GGTCTACAAGGGGACCATGAAAGGTGGGCCTGAGATTGGTGTAATTTCCCTCTGCATTAGGGAGGAGCAATGGACAGGGT ACGTTGAACTCTATTTTCAGAGAGAGGTAAATGGAAACATTCCAATAACTACCGCACACAAGAGTTGACAGACAATAGTT GTCCAAGTTTTTAAATATTTATTATGCTATTGATTTCTTTCAGGTGGCAGAATTGGCTAGGCTAAATCATGAGAATACTG GAAAATTACTGGGGTATTGTAGAGAGAGCACTCCGTTTACAAGGATGTTGGTTTTTGATTATGCTTTAAATGGGACCCAA AATGTAGCAAAGTCAATGGCGAAGTACCCAAAACCCATCACCGATTAGCCTCCATTTGCTGCTGTAGTTTTGACTTGATT AGCCTCCATTTGCTGCTGTAGTTTTGACTTGAACCCCATCACCGGTACTTCATAGGTAAGTTTGTTGAGGGAAAATCTAT CAGAGTATTAAGCTTGCCTACACTCTGATATACATTCATTCGGTTTATTTCAGGAACCATTTGATTTTATAGTAGCAGCT CTTGCAAAGTTTGTTGATTCAGAACCTGAAGGTTTTCATCCACCCCGAGGAAGACATATCTTGGCTGGATTTTACGTTCT CATTCCCAGTGAAGCAAACAAAGCAAGTGCACCTGGGAATCTAATAAGGTGGACTGAGGGTTTCCATATGAAGATACAGT AATTCTCTTTACCTTGATTATGTTTTCAATTTTTTTTTATTGAACATCTTTCATGCTGTCATTTTATCTTCATTATATTG TGATGCATCTGAAGACTTCCACGAGTCTGTCTCGGTTTCACATACACACTAGCACAATCCTTTTTGCTTCTGTTAAAGGT ATGCTTTGGTATTGAATGAAAACAGAGAAACTAAAGGGATAAGGAAGAGAATGGAAGAGAGTTAGGGGGTTATAGAATGA TTGTACTTCCATTTTATTGGGCAATTTAAAATCTTTCAAAAGTAGTAGAAGCTTGAAATTTCCATAAAGTTGAACATGGA ATGCTTGAAGCTCTCCCTTCCCCATCCTTCTCCATCCAAATCAAACATACCTCAACATTTTTTTATAAAACTCTGAATCT GAAATTACCATCACGAATAAGTGCTAATCTCAGACCACATGATGTATCACAGTTGCCTTGCAGTTCATGGTTCTGCAGAC CCAGTTATCCCTGTCAAAGATGCACAATAGTTTCCCAATATTATACCTAACCACAAATTACATATCATACATCATAGTTA CACTAAACACCAAGATGAGCTCGACTTCATTGTTATGATCATGGTTACTCATACACTTGATTCATTTCTTGATTCCAAAA TTAATTGCAATGATTTGTTTGATATTATTCTTAGTTTTCAAATTATAGATGAAAATCATGTTTCCGCCTGGGATCTTCTA CCTGACATATATAATTGTTCATCGCATTATTTGATAGTTTTTGGATAATGTAAGTTTCCTCTATTTCCTGGATCATTCAA TTGTGGAATTTAAAAGAAATAATTCTGCGTTGACTGCTTACCATTATCTATTTATGACAAGATTATCTATGCTCGTGCCT ACACTTATGAGCATCACTACAACCTCCTGCATGCTTTGGCCGCTAAAATGTTTGAAGAACCATTCAGACTTTTGGTGTGA TGTTACCGATACTGAACACAGTTATCTTCAATTGGTTTATTATGGGATATGGAGAGTTAATAAAATTGACTGATGGCAGA CTGTAGATTCAATGATTGCTTTGTTTAGGGTGGACTTTTCAGGAAAAGGAGAGCTTGCTGAGCGCCGGGTATATGAATCG GTCATTTAAATTCATTTACAACAACCTGTTCCCTTCTCTATGTCCAATTTTGCGGATATGTAAAATAACCATTGCAGCAA AAACTGGCACAAATTCATTCTCGATTGATACAGATAGCTGAGGAATTCAATGTATCAGTTTACATGACAAATCCAGGTAT TCTATGAAACTTACGTGTTAATTTCCCCTCTCAAATCCCGAAACCGATAGTCTAAATGGGTTTGTTTAAAAACATTAAGC AGAAGTA
CDS sequence (LotjaGi4g1v0121900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATGCGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAACCCAAACCACCAACCTACTGAACATATGCCCAA GCATCATGGATCATCAAAACCTTCTTGGCTTTTAGCTATAGAAATAGTAATGGGAACTATGGTCGGTTCTCTCTTTCTGG TTGCTGTTCTCGCTGCTTTCCAGAGGTGTAACAAAAAATCAGCTATCGTTATTCCTTGGAAAAAATCTGCAAGCCAGAAA GATCATATGACAGTTTATATAGACCCTGAGATGTTAAAGGATGTGAGAAGGTATAGCAGACAAGATCTTGAAGTGGCATG TGAAGACTTCAGCAACATAATAGGGTCCTCACCAGACAGTGTGGTCTACAAGGGGACCATGAAAGGTGGGCCTGAGATTG GTGTAATTTCCCTCTGCATTAGGGAGGAGCAATGGACAGGGTACGTTGAACTCTATTTTCAGAGAGAGGTGGCAGAATTG GCTAGGCTAAATCATGAGAATACTGGAAAATTACTGGGGTATTGTAGAGAGAGCACTCCGTTTACAAGGATGTTGGTTTT TGATTATGCTTTAAATGGGACCCAAAATGTAGCAAAGTCAATGGCGAAGTACCCAAAACCCATCACCGATTAG
Protein sequence (LotjaGi4g1v0121900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQCAGASPAKSQPVVNPNHQPTEHMPKHHGSSKPSWLLAIEIVMGTMVGSLFLVAVLAAFQRCNKKSAIVIPWKKSASQK DHMTVYIDPEMLKDVRRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIGVISLCIREEQWTGYVELYFQREVAEL ARLNHENTGKLLGYCRESTPFTRMLVFDYALNGTQNVAKSMAKYPKPITD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 1 | 195 | 195 | 3.7E-120 | – | |
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 1 | 195 | 195 | 3.7E-120 | – | |
| Phobius | 36 | 60 | 25 | - | – | |
| TMHMM | 38 | 60 | 23 | - | – | |
| Phobius | 61 | 210 | 150 | - | – | |
| Gene3D | 80 | 189 | 110 | 1.7E-13 | – | |
| SUPERFAMILY | 83 | 193 | 111 | 5.88E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0121900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…