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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0122300 |
| Transcript ID | LotjaGi4g1v0122300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FAR1-RELATED SEQUENCE 5; TAIR: AT4G15090.1 FRS (FAR1 Related Sequences) transcription factor family; Swiss-Prot: sp|Q2HEW5|CHG2_CHAGB PKS-NRPS hybrid synthetase CHGG_01239; TrEMBL-Plants: tr|A0A0B2Q5Y3|A0A0B2Q5Y3_GLYSO Protein FAR1-RELATED SEQUENCE 5; Found in the gene: LotjaGi4g1v0122300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17633759..17639425) extracted from Lotus japonicus Gifu genome v1.2.
CCGCACCCGCCCGAACCAAACTGCTTCAATTCGATTTCTTTCAACTTTTAACCCGAATACCTGTCAAAGTCTGCCCGAAT GCTTCATTTCAGTGTTGGGTTCCTCGGATACGGGTCGGTGAAGGTTTGATGCTCACCCCTCATATGTCCCAAAAACAATT TTCGATCCAGAAGCACTAAATATGTGCATCAAAAGCAAGGACATTAATTTCTGAAACCACTCTCTGAGCGTATGGTTTTC CCTTTTATTCAATTTTTATGGGTTAACTTACCAAACACACAAGCACATTAATTTCCAGTCCTTTCCCTGCTGCACTTTTC CTTCCTGCATTGTCATGTCTTTCAAATCTGGTTGATGCATCCATCCATCAACTGTGCGCAGCGAAAGGCAGAGTGGTCAG GGGATTCGGCCAATGTGAGTGGGTGGTGGGATTTCTTCCTTATCCTTTTGCTGTGGAGTGGCAGGCTTATCTCTAGCTCA TCCCATTGATTTGATTTATATAAACTTGTTCCATGCACCATTCCGTGTAGATCAAAGTCTCAAACAAGTTAGTTAGTTAG GTGCAATTGGTTCCAACACCAACATGCATCTTTTACTTCAGAACCAACTTCTTCACTCTCTGTGGACTCACTCGGCCACT CCTCTAATCCAGCTTCTTTCCCAGGTCATTTTCTCTGCCTTCTCACAATTTTTGTCATGTCCTTCGCAATAATATTTTTT TTTGTTCCTCTACTCATTCATGCAATTTTACAATTTCAAAATTTCGGCATATATAACTGTTTGTGTGTATAAAGTATGAA CCACTATTCTTTTTGTTTTTTTTATAACATGATAGTGATTAATTACTGATTAGTGAGTCTTGTTTCATACTCAAAAGCAC TTTGTAGTTAAAGTTACCCAAACAAAATTTTAATAAATATATCTAAACATAAATTATGTCACTTTAATTTACATTTACAA AAACTTAATTTGGGCTAGATTTAATTCTTGTTTGTTTCATTGTCACATGAACAGAAATAATTCTTTTATTATTTTTAATT ATTCTGATATAGATCGTGGATATCATTGTAAATTTATCATGGTGAGTCATCTTTGGTACTTTGCTTCAGGGTACAAGAGG AAACAACTAAAAAGGGGGATTATGGAAATTTTCTCACAAGTGTGATTTCCTTGATTAGTATAAGGTAAATTATATTATGT TTAATCTTTCTACTTGAAAGTGTTAGTTAATATTTTACTAATAATTGTGAAATCAAATGAAACTAGACAAATTTTGAGCA AGTACTTGATCTTATTTTAATATAACGTGTGTTCTTAGAAGCATGTTTATAGAAAATAGAAAAGTTCAATAAATTTTTTG TGAAATCAAAAATATATCTCTGGCACAAAGCCTAAGAATACCAACCCAAATTTTTCATAGGATCCTAATTTTCCCGAGGA AAGTGAGGTACCAGAAAAAAACAAGGCTTGATTTCAGGATTTGGGTTTGGCACCCCACCCTTTAGGCTACGCGCCCCAGC ATTTTTTTTTTATTCCAAAACTACCCATCGGTAAATGATTTGCCGATGTCAAAATAACAATCGGTAAATGATTTACCATT ATTGTTCCTCAGTATGAACACCTTTATCCTATTACCCAGAACACGAAGAACAATATCGGTTAATCATTAACCGATTCTTA TATTGATATCGGTATATCATTTACCGATTGGTAATCTGGCAGTTTGATCACCTTTTCACCATTACCAACCCCTCCACCAA CCCCTCCACCATTACTCCTCCCTCCAACAACCCCCACCAGCCCCCCATAACTCGCCCAAACTACCTTATTCTACCATTAC TCCACTCCTCCCTCACATTTCACCTTCCCACCACCACCACCATCTCCACATTTCCACCACCACCACCACCACCAAGGGAA AGCTTTTAACTTCTGGTAAGTGGTGTTAGCTTTAGTACTTTATTTATAGTTAGTTTAAGTAGTTAGTTGTTAGTTTAAGT AGTTAGTTTAGTTAGTTAAGTTGGTAATTTAGGCTGCTGAATCGTGAATCGAATCGGTAAATGAATTGCCGTTAATGTAT CGGATTATGATTTACCGTTATTATACCGGAATTTGATTTACCGTTATAGGGTCGGTTATTGATTTACCGTTTTTGTTCCA GGGATGATAGAGTCCTTTTTCTTTGGTGAATCACAATTGATACATGCTGCTGGATTGGAAAATGATAATCCAGAGGAGCA ACCATCACTAGCTGAACCTCCGATTATATCTATAGATGTCTCTCATTTGTATCATACTGATCAGGTACTCATTGCACAAA TTTTTGCATGCTTTGTTTATGCCTTGTTTTATGCCTTATGCCTTGTTTATCCTGAAACAGCGTTTCCCTTTGAAAGATGA TCTTATGAAATGGGTTCGCGACATTTCTATGGCAAATAATTTTGTTTTGGTGACAACAAAGTCTGATAGTGGTGCGAAGG GAAGAAAAGAATATGTCATTCTGGGGTGTGAGAAGCATGGTGCGTATATTCCCTACAGAGAACCGGATCTTGTTGAAGGA ACGTCAACACAAAAGACAGGTTGTCCTTTTAGGCTAAAAGGATGACGTACGAAAGATGATAAAGGTTGATGGTTGAAGGT GATGGACGGTAGACACATCCATCTCGCAGCTGAGTCACTAGTTGGCCACAATTACGCTGGTAGACTGAATAGTGAGGCGA AGGAGGACGTGATAAATCAGGCTAAGACTTGGGTTCCACCTAGAAAGATGTTGGCGTCCTTAAAGGAAAAAGATCCTTCA AACTTGACTACCATCCAACAAATTTATGGTGTTTGCAAGCGGTTCAGACAATCCGTTCGTGGGTCACTGACAGAGATACA ATACTTGCTGAAGAAGTTGGACGGTGAGAAGTATGTTCACTTCGAACGAAATGAACCCGGATCGGAAGTGATTAGAGATA TATTTTGGGCTCATCCGAATGCCGTCAAACTTTTCAACACATTCCCATATGTAGTGATCATGGATTGCACATACAAGACC AGCAAATACAAACTACCCTTGCTCGAGATTGTTGGCCTGACCTCCACGGATAAAACATACTCAATAGCATTCTGTTACAT TGGCAGTGAGACCACAGAGGACTACATTTGGGCATTGAAGTGTATGAAGTCTCTGATTTTCGACCAATCCAGGTTGCCTA GAGTGATTGTGACGGATAGAGATCTTGCTTTATTGAGTGCTGCTTCACAAAGCCTTCCCACCACCACCCATTTACTATGC TTGTGGCACATCAACAAGTGTGTTTTGACAAAGTGCAAAGAGTATGTTGGCACGGATGATTTTGCTCAAGAGGTTATGGA CAAGTGGGCCGAATTGGTAGATGCTCCAACAGTTCCAGAATTTGAAGCTCATTGGATTGAATTGTTTAACATGTGCAAGC ATAAACACAAGTTGAAATTTGCCACTTATTGTTCTACTACATGGTTGGTCCACAAGCAGAAATTTGCCAAGGCATGGACA AATCATGTGATGCATTTTGGAACAACAACAAGTAACAGGTACAAAAATTATGTTATGACTTGTTATATGTATTTCATTTC ATAGATTATTACAATATTAATTCTTACATGTGCGTTGTTGGTTTGCAGGGCTGAAGGTACACATGCCAACTTGAAGTTGA TGTTGCGGAACAGTAAGGGTGACCTGGCCACATCATGGAATGCGTCGCATAGTTTGACCACCAATCGCCACACTGAGATA GTAGCATCGTTTGAGCGCAGTATGAATAAAATTGATCACCTTTTCAAGACCCCTTTCTACACAAATATTAGGGGATTTAT GTCAATCAAATGCCTGAAACTCATTGATGCTGAACTGACAAGAATGCGAGCCTGCGGCGGCAGATGCGATTGCTTATTGA GAGAGACTCATGGACTACCTTGCGGTTGTCAACTTGCAGGTTACCGGTCAACCACTCTCCTCTCAACTACTTTCAATTAT TTATATTTGTGATTTAATGTAACATGTCTGTGAACTTGCAGATTATGAGAGGATTCCGTACGAAGCCATTCATCCATTCT GGAAGAGCCTAAGTTGGGAGCATGTACCTGTTGCAGATACTGGCAGCTCAGATATTTGCGGACTAAACCATGGAGAGATG CACCCAGAAGTTGAGGCACTGACACGTTATTTCCATTCTTTGGATACTGGAGGGCAGAGTATGGTAAGGAGGAAGCTTCA AGCGATATATTGTCCTGAAAGGAGTACACTATGTACTCCTGAGCTTCGGATAAAGTCCAACCGCACTGCTAAGTTGAAAG AGAGCAAACAACCCAAGGGTCGAGCAATAGGATCCTTGACTCGTGATCCTTCAGCGTTTGAACTTACAGACAAGAAGATT AAAGAGGAAATGAAGTCTTCACAACCAGCAAAGAGGAAGAAGCGTGTGAAGAAGTCATAATAAGTAAAGCATTTTCACAT ATGAGCATATCATTTGAGTCATTTTTTAACTTAATCAGGAAATTTCCAATCAATCGTTTAGCAACTAACCATAGGAAAAG GAAAATATAGAGAATTAGTTGTTAGTTTGCATGTGAATGTGATTAAATTAAATTTCTAGCTGTGTTAAGGTCAAGCAACC ATCATCACAAGCAAACAAAAACAATAAACAACTTTCCTAATTACAACACATGAAGCATATGATTTGAGCGCTTAATCTTT TCCAATAAACAATAAACAATAAACAACTTTCCTAATCACAACACATCAAATCTATCTTGATCTTTTCCAATTCTCAACAA ATCAGCAAAGTAATCATGGAAGCTAAATACATGCCATGGTTAAATATTGGAAATAAATTTTGGAAGTCTGCACTGTCATA CTGTCATACTGCGATAAAGGGTATTTTCTCTTATAATTATAATTCTGATTTGAAGCGTATTTTTTCTAATTTGTTTTGTT TTCTGTTTAAGGGGTGGTGCTGGTTCAAGATGCCCCTTGACAATGTGAAGGCAAAGATTCAAGACAAGACATTGCTGACT ACAACATTCAGAAGGAGTCCAGCCTTCACCTTGTGCTGCGTCTTTGTGGTGGATTCTAAGTTGGGGGAATTGTCTCTGTC TGTGCTGTTGGAACTTTTCAAATTTGTGAACTGTGTGTTATTGGGTCTCTGTTGACCCATTTGAACAATTATGGTTTGTT ATAGCCTCTTGAACAAGTATCATTTGTTGTGGCCTCTAATGGCCTGTGATTTAATTCAGCAATTTCTGGTTACACGAGGT ACATATAGCTAAAAATTTAATGTTTATTTTTGCTTCATGAAAATTGTATTGCAAAAAGGGGGTTCCAAAGATTTCTAGTC ATTAGTTAGATGATTTAAGATTAGACAGGAAGAAACAGAGAAAGGAAAAGGGAATAATGGAAGAAAATTGCTTGATGGAA TTATGTGAAAAGAAGATGATTATAGTATGAACCACATCATCAAGCACATGATCCTCGGCCAGCTACTCCTGTACAACCTG CGCCCCATCCCGGGGTTGAACCTGAACCTGGGCATCTATGTCCTCCATTAAAAATTTTGGGAAAACCCTTTTTATTTTCT GGTACCTCACTTTCCTTGGAGAAAGTAGGGTCCTTTGAAAAATTTGGGTTTAGGTATTCTTAGTGAT
CDS sequence (LotjaGi4g1v0122300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGTAGACACATCCATCTCGCAGCTGAGTCACTAGTTGGCCACAATTACGCTGGTAGACTGAATAGTGAGGCGAA GGAGGACGTGATAAATCAGGCTAAGACTTGGGTTCCACCTAGAAAGATGTTGGCGTCCTTAAAGGAAAAAGATCCTTCAA ACTTGACTACCATCCAACAAATTTATGGTGTTTGCAAGCGGTTCAGACAATCCGTTCGTGGGTCACTGACAGAGATACAA TACTTGCTGAAGAAGTTGGACGGTGAGAAGTATGTTCACTTCGAACGAAATGAACCCGGATCGGAAGTGATTAGAGATAT ATTTTGGGCTCATCCGAATGCCGTCAAACTTTTCAACACATTCCCATATGTAGTGATCATGGATTGCACATACAAGACCA GCAAATACAAACTACCCTTGCTCGAGATTGTTGGCCTGACCTCCACGGATAAAACATACTCAATAGCATTCTGTTACATT GGCAGTGAGACCACAGAGGACTACATTTGGGCATTGAAGTGTATGAAGTCTCTGATTTTCGACCAATCCAGGTTGCCTAG AGTGATTGTGACGGATAGAGATCTTGCTTTATTGAGTGCTGCTTCACAAAGCCTTCCCACCACCACCCATTTACTATGCT TGTGGCACATCAACAAGTGTGTTTTGACAAAGTGCAAAGAGTATGTTGGCACGGATGATTTTGCTCAAGAGGTTATGGAC AAGTGGGCCGAATTGGTAGATGCTCCAACAGTTCCAGAATTTGAAGCTCATTGGATTGAATTGTTTAACATGTGCAAGCA TAAACACAAGTTGAAATTTGCCACTTATTGTTCTACTACATGGTTGGTCCACAAGCAGAAATTTGCCAAGGCATGGACAA ATCATGTGATGCATTTTGGAACAACAACAAGTAACAGGGCTGAAGGTACACATGCCAACTTGAAGTTGATGTTGCGGAAC AGTAAGGGTGACCTGGCCACATCATGGAATGCGTCGCATAGTTTGACCACCAATCGCCACACTGAGATAGTAGCATCGTT TGAGCGCAGTATGAATAAAATTGATCACCTTTTCAAGACCCCTTTCTACACAAATATTAGGGGATTTATGTCAATCAAAT GCCTGAAACTCATTGATGCTGAACTGACAAGAATGCGAGCCTGCGGCGGCAGATGCGATTGCTTATTGAGAGAGACTCAT GGACTACCTTGCGGTTGTCAACTTGCAGATTATGAGAGGATTCCGTACGAAGCCATTCATCCATTCTGGAAGAGCCTAAG TTGGGAGCATGTACCTGTTGCAGATACTGGCAGCTCAGATATTTGCGGACTAAACCATGGAGAGATGCACCCAGAAGTTG AGGCACTGACACGTTATTTCCATTCTTTGGATACTGGAGGGCAGAGTATGGTAAGGAGGAAGCTTCAAGCGATATATTGT CCTGAAAGGAGTACACTATGTACTCCTGAGCTTCGGATAAAGTCCAACCGCACTGCTAAGTTGAAAGAGAGCAAACAACC CAAGGGTCGAGCAATAGGATCCTTGACTCGTGATCCTTCAGCGTTTGAACTTACAGACAAGAAGATTAAAGAGGAAATGA AGTCTTCACAACCAGCAAAGAGGAAGAAGCGTGTGAAGAAGTCATAA
Protein sequence (LotjaGi4g1v0122300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGRHIHLAAESLVGHNYAGRLNSEAKEDVINQAKTWVPPRKMLASLKEKDPSNLTTIQQIYGVCKRFRQSVRGSLTEIQ YLLKKLDGEKYVHFERNEPGSEVIRDIFWAHPNAVKLFNTFPYVVIMDCTYKTSKYKLPLLEIVGLTSTDKTYSIAFCYI GSETTEDYIWALKCMKSLIFDQSRLPRVIVTDRDLALLSAASQSLPTTTHLLCLWHINKCVLTKCKEYVGTDDFAQEVMD KWAELVDAPTVPEFEAHWIELFNMCKHKHKLKFATYCSTTWLVHKQKFAKAWTNHVMHFGTTTSNRAEGTHANLKLMLRN SKGDLATSWNASHSLTTNRHTEIVASFERSMNKIDHLFKTPFYTNIRGFMSIKCLKLIDAELTRMRACGGRCDCLLRETH GLPCGCQLADYERIPYEAIHPFWKSLSWEHVPVADTGSSDICGLNHGEMHPEVEALTRYFHSLDTGGQSMVRRKLQAIYC PERSTLCTPELRIKSNRTAKLKESKQPKGRAIGSLTRDPSAFELTDKKIKEEMKSSQPAKRKKRVKKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 35 | 336 | 302 | 2.4E-43 | – | |
| PANTHER | 35 | 336 | 302 | 2.4E-43 | ||
| Pfam | 124 | 219 | 96 | 5.2E-22 | ||
| MobiDBLite | 498 | 548 | 51 | - | – | |
| MobiDBLite | 521 | 538 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0122300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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