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LotjaGi4g1v0132800.2

Overview

Field Value
Gene ID LotjaGi4g1v0132800
Transcript ID LotjaGi4g1v0132800.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Phosphatase 2C family protein; TAIR: AT3G51370.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46; TrEMBL-Plants: tr|I1JCD8|I1JCD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0132800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:19369670..19377075) extracted from Lotus japonicus Gifu genome v1.2.

ATGCTATCTCGGTTAATGGACTTGTACCTGAGCTCCTGCTGGCGGCGGCGAGGATCCACGGACCACCGCAAAGGGGGCTC GGATGTGGTTTCGGGGCGGAAGGAAGGGCTGTTGTGGTACAAGGACACCGGACAGCACTTATTTGGTGAGTACTCTATGG CGGTGGTGCAGGCTAACAACCTGCTTGAGGATCAGAGCCAGCTTGAGTCTGGTCCACTCAGCTTCATCGACGATGGTGGC GGCCCGTACGGTACTTTCATCGGTGTCTATGATGGTCACGGTGGACCTGAGACTTCACGCTACGTTTGTGATCACCTCTT CCAGCATCTAAAAAGTAAAAATGACTGTTCTTTTTTTCTTCTTCCTGTTTTAAGCATGTAGTCAATTTAGTCTTAAACAT TTAGTGTTAGTCTTTGGGATGAAAATTATGGTAAATATTTCTAAATAATGACTCTTTAATTGTCAAATTACTCTCTATAT GGGTCAAATTAGTCTTTGGTTTGAAATACTTGAGATATGAAGACTAGTTTGACTTACAAAATACACATTTAGGGACTTCA ATTATCTAGGGTTTAACATGATTGATGCATAACTTTTCATAGACTAATTTGTTATGAATTTTAGAATTATAATTTTCTGG AATAGATGGTCAAATTAGTTCCCAAAGGATATAGCATTTTCAATAGAGTAACAATTGGTCCTTTGGAGCAAGAAATTTTG TGCATTTCATTGGTCAAATTACTTTCAAAGATATTTGACTTGGGGTGTAATTTGATCGACAAGATATGAATTTAGCTACC TAAAACCATAGTTTCAGTTATTGAAGGAACATTATGATTGACGCTATGTTCAGCTACAATATTAGAAATATAGATATTGA TGGTCCAAAAATTTGACTTTGTACATGTTCAATAATACAGAGCAAGCAAGAAAATTCTTTTGCTCCTCATTCAATGTTGC TTCTGAACATTTATATTGATCTTTGTACGCGTGTATTTTTTCATTTTTATTTAAGGATTTGCGTCTGAGCACAAGTCTAT GTCGGTGGAGGTTATTCGGAAGGCATACCAAGCCACGGAAGAAGGTTTTCTGTCAGTGGTTACCAAACTGTGGCCTATGA ACGCCCAAATTGCTTCTGTTGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGGTGTCCTCTATATTGCTAACCTTGGT GATTCCCGTGCTGTACTTGGGCGCGTTGTCAGGGCAACTGGGGAGGTTTTGGCAATCCAACTTTCTTCGGAGCATAATGT GAGTATAGAATCTGTGAGACAAGAAATGCATTCTTTGCATCCGGATGACTCGAAAATTGTGGTTTTGAAGCACAATGTAT GGCGGGTGAAGGGTCTGATACAGGTAAGTTTTATATATGAAGCTTAATGATTAGCATTTTTTATTAACAAGTCAATCAGC ATCTCACATCCTTTTGTTTTGGAAATTAGAAAATTTATTTTTTCTTCTTTTTGCTGTCTATCAAAAGCTTGATGTGTTAT TGTACATGCGTGCCTAAATATCTCTTCACAAATGGTCCCAGTTGTGCTTAGGCTTTGCTGTCTTGGGCAGGAGTCTGTGT CAAGTTATATTTATTTATTTCAACATGTTATTAGAGATTTAGAGTTTATACCATCCTCCATGACCTAATCATCACTATTC TGCTGCTGAGTACCCAAAATCTGAAACTCCTTTCCAACAGTGTCATTGTCCAGTGATTATCTTCTTTTATCTTGCTGTTT GTCTCTGTTTGGTTGAGTCGCGTTAGCCTTTTAGTTTCTCTCTTTTCCATCCTTCTGTTTGTATCTGATTGGACTATTTA GAGTCTATTTGGTTATTAAATTGTCAACTGTTTGGTTTTGTAGTTGTGCCATTATTGTAACTTCCAGCTGCAAGCTATTG TTTGAATTGATTCAAGTAGTTTTTGAGACATTTGAAGATTCAGTATTTCACATTTCAGATATATTTTTCCATGGTTTTTT AGGTCTTTTGAATTCAAATTTGAGATTGTTCTTACTATTTGAAGCTTCCAAAAACTTGAGTGAATTTGGAGAGTTGGGCC TTGCTGTGTATGATTGCCATGGTATCTTTTCCTCCTTGGCCAGGCAACATTCCAAGTTTCCAACTACTCTTATGGTTGTG TCATTCCATTTGTCTTGCCAATTTCTTTCAAACAATTCTCATATTGGTGCATAACCAGCATCTCTTTAGCTTTGTTTATG ATATCTCATTTCTCTGAGTTATCTTCCAGATTTCAATTATGGTTTATTGACCCATCTTATATATTTAGGTTGTTGTCTTT AAGTGTATAGTCTTAACGAGCTAAAATGTCGAAAGGTTTAGCTTACAAAAGAATGCTAGAACAGAACATTAGGATAATTC CTGTGTTATGAGACTTACGACTTAGGAATAATGTTATATTAGTTGTGTTATTGGGCTGGCTTTGTACTACTTGTGCTAAT CTATTACATGACCGAGATTAGTAGTATAAATACGTTTATGCTTTTAGATATCTACTATGTCACATCATACAAATGTTAGA CATATTCTGTCTATTATCTGTGTCCACCAAAGACCTATACTTTCAATGGGAATTCTGCACTAAGAAAGGAAATATAACAA AGCAGGACTTTGCAAATTTCACCAAGAAACACCCTTAGAAAAATCCATGAACGTTAACTCTCTAGGAGGCTAAGAAATTA GAAGAAAGCAAGTTCATGCCATAAAAATCATGGAGTTAGATAGTTATTGCTGAAATTCTGGATCTGGAATCATGCTAGCA TGCTGCTGCGAATTTCTCAGAACTTCAGCAAAAGGTGCACAGTGCCAACACACATTTGTAGATAAAGAATTTTTTTTTGC TACCTCGAGAACCATTGCAACAGAGTTGAGAAAAAGACCCACAAATTATGGGACATATCCTGTAGTGTACATACAACCCA AACACCAAAGCTGCCTACTTCACAATGTAAAAGTGGCAGCTCATTATTCCGAGCTTTTGAAGCACTTGACATAAACATTG ATTATGGCCCAATTAGTGATACAATAGTTAGGTTGGTACAATATATAGCTTTTCGTGAAGTTTCCACCTATTGGTTCAAA GCACGGTGTTTACTATATCGTCCTCCTAGATTTTCTACATAAGATATAGAGCTGATTTGTTACAGCTTTTGTTATTATTA AAAAGACACTTATTTTGAAAAAAATCGCTTTTAATTTAAATATGTTTGTTTTAGCTTTTCAAATAATTCAAAATCTAAAA ATAATCAGATTTCTAATTATTTTTAGAAGCTACATTGAGTAACTTCTGGAAAAAAGAAGAAATTGTAACTAGCTTTTAAA ATAAAAGTGCTTTTCACAATTGTTTACCAAATGAAAAATAACTTGCTTCAAATAAAATTTCTAAAAAATAAATACCTTTT TTTGCAACCGTAAAATAACTTTTTTTTAAAAGACTACAAGAGATGCAAATGAGGTAGTAGCTGAAAAATCTAACACGAAG AAATATTTTAAAGGACTTAGGAATTTTGTTGAAGCTCTTCTTACAATGGGTAAGAAGGAGAGCCTTGGCGCAACAGTGAA ATGTTCTTGCCATGTGATTGAGGTCACAGGATCAAGTTCTGGAGATAGCCTCTTGTGTAAAAATGTGTAAAAAGCAAGAT AAGGTCGCGTACAACAGACCAAGTGGTCGGGCCCTTCCCCGGACCCTTTGGTGCACCGGGTAGCCTTTAAATACGAACAA TGGGTAACCGTAAAATCCCTAAGTTCGTACTCCAAGCTTCAAAAATAATTTTACGCAAGGCTGTAGCATGCTAAAAATCT ATAATTTTAGTTGTGTGTAGTTATACCTGAAGGAGCTCAAATTTGCAAATTTCTCAGTTTCTAAGAGCACAAACCCTAAC TCGAAGTAAAAAAAAAACACAATTTGTTCACAAAAAAGTAATAGAATTCATGGGGCTTTAGAGTTTCACCGACACAAGGA TGCTTGAGAATTGGGAGAAAAGTGGGCAAGATGAGAGAAAGAGGAGACAGTGAGGCCAGATGAGAGAGGGGGTGTAAGCT TCAAATGGTGGGGGAGGAGAGAATAGCACTGAAGCTTCTGGTGGAAATATGATTCCTATTCTCTGTTTTTTTTGTTCAAA CAGAGCAAAACAGTGCACTTGACAAAAAGATCTGCAATGTTATCGGGGGTTGAAGGTTGGATGTTGAATAGTTAGAAAGA AAGGAAGCCAAGTGTTGCAAAGATAAGAATCTTGCAATGAATGACTGGTTATGCAAGATAAGATAGGGTTGGGAACAAAA TCGTTTTGGACAAAGTTAGGATAGCTCCTATTGTAAGAAAGATGGTAGAGTCTTATCCTCTTTGTAGTTTGGGTATGTGT TGAAAGACCCATGAAATTTTTTGAGGACCATAGACTAGATGGAGGGGAGTTCAATAGTTAGAGATAGAGGGAGACCAAGA AAAATAGGAGAAACCGTTAAGAGATAGTATAATTTAAATAGTTATTTTTAAGAATTTGGGCTAGACCTAACTCTACTCTA ATAGATAGCTCATGGATGAAGTTCGTTGTACCAATGATAATCACTTGTTTGGCCATATCTCTAGGCAATGTCTTACCTTA AGGGATGAACATCTAGAGTTTGAAGTTTGCAAAACTAGACATCTGTGGATGACTCAATAGAGAGATCCAGGATAGGCTCT AATACCATCTTAAAATTCGAGTTATGTCTACCTTTACCCTTAAAGTTAGCTCATGGATGAGAACTGTTTTACCTTTTACA AGGACTTATTTGGCCAATCTCTACTTGCTGCTGTGAGACCTTAACAGTTATAATTAGACTTGATTCATGATAGGACATCA TGACATGGTTTGATCCATGTAGTAGACCGTAGACCCCACCTTGTGGCAAGTGTTAGTTGTTGTTGTTTGTAAAACATATT TATATACTTATAACCAAAAACTTGCACAAAAAAATTGCATGTTATTAATTAGTTATAACCATACACAGCATATTTGTGAT GGTGCATGTGTTATTACTTATTAGACAATATATATAAAACTATATAATAATATAAGATTGAAAATAAGTTTTACAGGCAC AGTTGTACAACTGTTATTTTTTTATTCAAATGTTATTGAATAAATCACTTATATATGTTTCATTGTAAAATTAAATCAAT ATTCTACTAAATTAAATGATTTAAAAAGTAATATAAGAACTGAAATTTATTCAGAAGTTTAGAAGCTTTGTATGAGAATG AATATAGAGGAGGAGATCGTGTACAATTGGGGGGATTTGTTTTATAAAAAAGTAAATACTAAACTGATTGATTGCAACTG TGAACTGTCAAATTAACTTGAAGTGAAAAAAGTTAATTTTTATTTTATTTATTTTGATAATTAATCAAGTTTGAGCTAGA GAGAAGAATATTCCATTAGCATCTTTCAATATGAGGTTAAGTTGTTAGAGAAGGTGGGGTGGAAGTGTAGATTTTGGTTA AGAATGGAGTTGAGTGTTGTTTTAACAAACCTGGAGGGAGAGGAGTGTATTTTACTCATTTTTTATAACAAATTATTTTG TTGGAAGTTGGAATGTGCAACAGTCATAATGGTAGCTCAAGTACTTTATTCTAAGAGAAGGATGCAACTGTGTTTCTAGA GTTGCTGGATACTCCTGTGGCTATTCATCACCTATATGCACAATAATTGAAGGACATGTTTCATAACTAGAGCCAAGTTT GGTGTTCTGATGTAATATTGCATTATTGCTACATATCAGTTTCGATCTTATATATCTCTGCATGCAAATGGTGATCATAA ATGTTTTTGTCAGTTGGATTGGTCTTGGTTTACACGTTTACACATTATTTGATTGTTGAGGCCTTGAGGGGGTGTCATTG GGTGAGAAAGTGATAAAGTAACACGTAACAAAAGCCTTATCCAACTACATGAGGTTGGCTATATGGATCACTTGGGCCAT CTTAAAGATTCAGCCCGTTTTATGTTGGCTTCTGCAGGCCTAACATAACATTTTTCCTTTATCCAGACTTAGAACCGGCT ATGCCTCAACATAGGTGGAGTTCAAAAATAAAATTAATGTGAATGATTAAAAATTCTCCCAGTTGAGAAAATGGAAACTT TAGGAGTAACTTATCTGATATTAAGAAACTTAATGTGAATTATAGTTATGTCAAAGTACCAATCAAGGATCTTCGCTTAT CCTATGGCAACTGACCCCTTATATCTTAAGGATGGTGGATGTAATCACATTGTATATCAACCTTGTTTATGTGATACATC ATTTAAGATGTGAACCTTGAGTGGTTTAGTTCCAAAAAATGTGCTAGGCTTGGCAATGAGGTTGCTACAGATGTGTTTTT ACACAGTCCGGTCTGCCACGCTAGAAAATATTGAAAATCTCACTCTACTCATCCTGCTTAGCTCTGCCCCAGTGCCCTGC ACTTGTGAACATTTTAGATTATTTTTAATATTTTATACGACAGCTGGCAAGAGATGAACTAATGAATATAAATTAATATA ATTGAATTTATTAATAACTTAGATATGCACAACGTTCATTTAGTTTACGTATGGAGTGTAGGGCAAGTTGACTGCAAACC CGAATCCTCCCCCTTCCATGCAGCATGTTTGTTTGACTTTGTCTACCGTGAGATATATCTTTACTATGCTGCAGTTGTAT GTTTTATTTAATATTGAAATCTTGAACTTGAATCAAAGATCTTCCAGCAAAGCAAATAAAGGAAATTTACATAAAAATTG CAAATTTTTATTGAATTTGGACTCCATATGATGGTAAATTATTTGGATCTATCATGTGAAATTGAACTTAATTATTAAAT TTGTGTTGCAGGTTTCTAGATCCATTGGTGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCTCTTTATGCTAAG TTTCGTCTTCGTGACACTTTTAAAAGGCCAATTTTGAGCTCTGACCCATCAATTTCTGTTCATGAACTTCAACAGCATGA TCAGTTTATCATATTTGCTTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACC CACACAATGTAAGATCAATATACATTATAGTTGTTCTATTTTGTTTGTTTTTTTATTGCTTATTTACTATGTTTTTGTCT AGTCATAAATTAGCTTCCCCTTTCTATTCATAAGTTTCAAATGAGTTGATTTTTGTATTTATTCATGTACTTTGATGGAC TATTTAACGTTTGATTTGTTTAACACGATTTCCATGCTCTAGCAAGTAATTACTGTTTTCATCTTGGTCTTGCTTATGTG CTCCGCTCATGTAAAGTAATGATGCTGTTTTCGTGTTGGAAATTAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0132800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTATCTCGGTTAATGGACTTGTACCTGAGCTCCTGCTGGCGGCGGCGAGGATCCACGGACCACCGCAAAGGGGGCTC GGATGTGGTTTCGGGGCGGAAGGAAGGGCTGTTGTGGTACAAGGACACCGGACAGCACTTATTTGGTGAGTACTCTATGG CGGTGGTGCAGGCTAACAACCTGCTTGAGGATCAGAGCCAGCTTGAGTCTGGTCCACTCAGCTTCATCGACGATGGTGGC GGCCCGTACGGTACTTTCATCGGTGTCTATGATGGTCACGGTGGACCTGAGACTTCACGCTACGTTTGTGATCACCTCTT CCAGCATCTAAAAAGATTTGCGTCTGAGCACAAGTCTATGTCGGTGGAGGTTATTCGGAAGGCATACCAAGCCACGGAAG AAGGTTTTCTGTCAGTGGTTACCAAACTGTGGCCTATGAACGCCCAAATTGCTTCTGTTGGATCTTGTTGTTTGGTTGGT GTGATTTGTGGTGGTGTCCTCTATATTGCTAACCTTGGTGATTCCCGTGCTGTACTTGGGCGCGTTGTCAGGGCAACTGG GGAGGTTTTGGCAATCCAACTTTCTTCGGAGCATAATGTGAGTATAGAATCTGTGAGACAAGAAATGCATTCTTTGCATC CGGATGACTCGAAAATTGTGGTTTTGAAGCACAATGTATGGCGGGTGAAGGGTCTGATACAGGTTTCTAGATCCATTGGT GATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCTCTTTATGCTAAGTTTCGTCTTCGTGACACTTTTAAAAGGCC AATTTTGAGCTCTGACCCATCAATTTCTGTTCATGAACTTCAACAGCATGATCAGTTTATCATATTTGCTTCTGATGGTC TTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACCCACACAATGTCTTGCTTATGTGCTCCGCT CATGTAAAGTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0132800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSRLMDLYLSSCWRRRGSTDHRKGGSDVVSGRKEGLLWYKDTGQHLFGEYSMAVVQANNLLEDQSQLESGPLSFIDDGG GPYGTFIGVYDGHGGPETSRYVCDHLFQHLKRFASEHKSMSVEVIRKAYQATEEGFLSVVTKLWPMNAQIASVGSCCLVG VICGGVLYIANLGDSRAVLGRVVRATGEVLAIQLSSEHNVSIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIG DVYLKKAEFNKEPLYAKFRLRDTFKRPILSSDPSISVHELQQHDQFIIFASDGLWEHLSNQDAVDIVQNHPHNVLLMCSA HVK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF593
22 316 295 3.9E-159 –
PANTHER
PTHR13832
22 316 295 3.9E-159
IPR015655
Gene3D
G3DSA:3.60.40.10
38 321 284 1.3E-68
IPR036457
SMART
SM00332
42 322 281 3.6E-66
IPR001932
ProSiteProfiles
PS51746
47 323 277 39.545
IPR001932
SUPERFAMILY
SSF81606
59 310 252 1.7E-49
IPR036457
CDD
cd00143
84 317 234 6.93372E-57
IPR001932
Pfam
PF00481
85 310 226 6.4E-38
IPR001932
ProSitePatterns
PS01032
86 94 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0132800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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