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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0138400 |
| Transcript ID | LotjaGi4g1v0138400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MLO-like protein; TAIR: AT2G17480.1 Seven transmembrane MLO family protein; Swiss-Prot: sp|O22757|MLO8_ARATH MLO-like protein 8; TrEMBL-Plants: tr|I1MMT2|I1MMT2_SOYBN MLO-like protein; Found in the gene: LotjaGi4g1v0138400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:20569878..20576250) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAGCTGTGTGTTCTGAACTTCCTTAATTGTTGCCACCAGATTGCATGTTTAGATTTGTCCACACGTCTAACAACATC ATAGTCATCTTCATTTTTTGGATTTATTATTCATTCTCTTACATCATCATGTACACAGACAGGGATTACAAAAAATTAAC AATAAAATCTTCTTTTTCTCTCTCTCTTGAAAAAGTTAGAAGAACCTTTGAAACTGCATTCATTGATTCATTCATTGATT CATTCATAGTATACAAAATCAAACTCAGCAACTACTGCAACAAACACCACCAACACTCTCAAAACCTCACCTCTCTCTCT CTTCTCTCTTTCAATAAATGCACGCGTTTCTCAACATACTTTCAACCATTTCAAAATCAATTCATTCATAGTATACAAAA TCAAACTCAGCAACTACTGCAACAAACACCACCAACACTCTCAAAACCTCACCTCTCTCTCTCTTCTCTCTTTCAATAAA TGCACGGGTTTCTCAACATACTTTCAACCATTTCAAAATCAACCCAGATCAATAAAGTTGTTATCTTTTTCCAATTCTAA AGTGACCCAGATAATTCTTTTGCTTGCAATCTCTTTCTAAGAACCCATTTTTCAATTTTTTTTTTTCAACTTTCAAGTCC CATTATTTTTGCTGAGTGTTCATTGGTGAATTGTTGAGTTGTTTTTAGTATCAATGTTTGTCTCAAAGTACAAAAGTTTG TCTCTTTGTCTGGTTTCATGGCTGTGCTATGGTGGAGTGTTGGCTATGGCTTCAAGTGAAGAGGGTAGTAGCAGTTCCAA AAACCTTGATCAGACACCAACATGGGCTGTTGCTTGTGTCTGCACTGTTTTCATCTTGATATCTTTAGTTCTGGAGAAGG TTCTTCACAAAGTGGGAACGGTAATGTCACTGATTTCTCACATTTTTTCTCCTCTTGCAATTATTAGCACTATTGCTCCT CTTTATTTGACTCAGAACAGGCTTTGATCATCTGTTTTTGCTCAATTTGATTGATTTGGTACAATGCAGTTTCGTTTTCC ATTGCTCAGGCTTCGGCATTTGATCATTTCACTTGTACAGTTTGTGATTTTGCTGTTTTGTGATGCTCATTTTCTGTTCT GTGTTTGCATTTTCCAGTTTCAATTTTTTGCTTCCTGGGAGTTTTTTTTTTATATTTTTTGTTGAAAATTATCTCATATC AACAATTGGAATCTTATAAATGTTTGGGGGGTTGTTTTGCTTAGAGGGGCACTATAAAATCTTAGTTGATGGTGTGATGA GTGTTTGATGTAAATTTGTTGATGAAATTTTCTCAGTGGCTACATGATAGGCACAAAAGGGCTCTCCTTGAAGCTCTGGA AAAGGTCAAAGCGGGTAAGACTTCAATTTTCTTTTATTTTCATTGTCTGTTTTTCAGATTTATGGGGAATTGTAAAAATA ACTATTATTTATTCCATGTTTTTCCATTTTATTAATTGATTAATTAATGTTTGTTTTCAGAGCTGATGATTTTAGGATTC CTTTCACTGCTTCTGACTTTTGGGCAGAGCTACATTGTTAAAATATGTATTCCAGCCAATTTGGCAGACAAACTGTTGCC ATGTCCATATACAGGAACCAACAAAGAATCAAGTAGTGAAGAGGAGCATCATAGGAAGCTTCTCTCTTATCAACGCAGAA TTTTGTCAGATGATACTAGCTCTTACAAATGCAAGGAGGTAACTATGCAACGACGCTTAATTGTTGAATTTTGACATCTA TCCGTGTTCTTTGGTATAAAAGGCCTTATAGTTTATCTGTCAGTTAAACTTGCAAGTATTTCACAATGATATTTTTCTTT ATAAAACTTTGTTTTTCTTAGCACTTGGAAGGTTCATCTTGCAAAGAAAAACAAACAATGTTTTTGTAGTCATGTTATGT TGCATTGTTCACCCTACTTGTGATTTGTCTCATTTAGAACACCATTTTTAGGTGTATGTTACTATGTTGGTAAATTGGAA ACAATTCCTTGTCTGTCAATACTGAAGAGCAATTAAAGTACTTGATGTATACATTTTAAATGCTATATTCCAATTTTTTG TTAGGTTTTAATGCATTTTCTGTACAATATCCGCCTCTTCTCTTCATGATGTTGTTAATTTGATTTATCCTATTTCTGCT AGCACAATATCAAAGGTTGCTTTTGTTTTTACTGCCTGACACTATTTGCAATTTTCCCCTATCAATAGTTGCATATCTAA TTGTTGTTTGTTATAGGGACATGAGCCACTTATATCTGTCAATGGATTGCACCAGTTACACATTCTCATTTTCTTCTTAG CAATCCTTCACGTGCTTTACAGCGCTGTCACGATGCTTCTTGGGAGACTAAAGGTGTGCATGTCTTTTCTTTTATAGTTT TTTGATTCATTGATTGAATTTGAATGTGTCTGAAAGGTCAATATAATTATGGTCAATAGGTTGTCTTCAGGTAAGGGTTA ACTTTAAACAGCTGATGAAACTAAATCAGTTACAATGCTGTTAAAGCATCTAGCCTTAAGGAAATAAAGCCTTAAATGGT GACAGTCTCATTTAATGATTGAAACTTCTTGTATTTGCTGTTTTATAATGTTATTTCTTCTAAGAGAAAAGGACGAAGAA TGAGTAGATCTTGTATAAATTACGATATATTGGATTAAATCATCAAATGTCCATCCTTTGCCCATTATTATTTTTACATA TTAGTCGGATTTTAGTGCAAGTCTAAGGGGGAATGAAAACATAGTGAATGCAATTGATAACCCTTACATTAACTTCACTG TCGAGAAGCTGAAAGAAAACTCAACCGGTTTGTGCCCAATGAGAAATCACCATATAAAGAAAAATTGGATTTAGGTGGTA AAGAATTTTGAACTGAAATGCGTTGACAATTAATGCCAAATGTGAGAGTTAGGGTTCTGAGATTGGCCACTTACTCGAAA ATGGTCAAGGATAGGAAATGTAAGCAGATCATATGCTCCTAAAGCCTTAATATGTTTAGTTATGTGACTATATTTTTGTC TGTCTATAAAATTCCAGAGCAGTACCATGTTCTTTTGGTCTTATTGTGACAATCAAGAGTTAGTATCTTAGTAGCTGATT GAAATTTTCCTTTGTGAAGATACGAGGATGGAAAGCATGGGAGCAAGAAACTTCATCTCATGGCTTTGAGTTTGCCAATG GTATGACTTTCAACAATTTTCTTCTTTCAGTGTAAAAGTTAATCTATAGTTTTACTAATTTTTCTTTGAAATGCTGCTAC ATGCGATTTCATGCATACATGGGGTATTTATCATGTGTGCAGATCCTTCAAGATTCCGGCTTACACATGAAACATCATTT GTGAGAGCCCATGCTACTTTTTGGACAAGATACCCTATCTTCTTTTATATAGTAAGACCCAGTTAACTAGTATATGTTTT CACCTTTTTTTGCTCGAGGTTAATGAGATGTTTTACCATCTCTTCCTTTTGGTCAATTTCAGGGATGCTTCTTTAGACAG TTTTATAGGTCAGTCGGTAAGGCTGACTACACGACTTTGCGCAATGGATTTATTAGTGTGAGTCCCTACCCCATAAGATG TGTTCTTTTAGTGTTGGATTCACCTTCCTTTCTTGACAGTGCATCATGTGTATTGTGTAGGTCCACCTCTCTCCAGGAAG TAAATTTAACTTCCAAAAGTATATCAAAAGGTCCTTGGAGGATGACTTCAAGGTAGTTGTGGGAGTCAGGTAACATTCTT CTACGTGCATGTTTAGATACACGGTAGAAAACACGGTAAGACCGAAATCACGGTGGACAATCGCAAAAGCTAAAGGAAGT TGCTCCTGTCTACCGTGATTTTGACTTTTATCGTGGTTTCCCACCATGTATGATGTATCCAAACATGCTCTATACATTAT ATGTAGCATCATATTATCTATTGGTTTTTCCTACTTATCTGACATACATGCTACTCTGGTGCACCGTGTTGTTGACAGTC CTGTCCTCTGGGCGTCGTTTGTTCTTTTCCTGCTCCTGAATGTTAATGGTGAGAAACTTTAGAGAGCAATCCCATGGAAT TTACAATTATGCAGTTGAATTCTCAAATAAAGAATGACAATTGATTAATCTTATATAATTTCCAGGTTGGCATTCTATGT TTTGGGCATCCTTAATTCCTGTCACTGTAAGTATTCTGTTCTTGGTGTTAAATTTGCCGATTGGTTGAGATCTACAATTA TAATTAAAATTAATTGACTGCAGATAATTTTGGCTGTTGGGACAAAACTTCAAGCCACATTGACGAAGATGGCTATTGAA ATCACAGAAAAACATGCAGTTGTCCAAGGGATTCCACTAGTTCAAGGCTCAGACAAATACTTTTGGTTTGGCCGGCCTCA GTTAGTTCTTCACCTTATCCATTTTGCTTTGTTCCAGGTATTCTATTCATTTCCTTTTAGCAGAATTTTGAACATGTTTA GTGGATCGAATAGATTAACTGTGTAAAACTGTTCAGTTTTTATACCTAATGATGAACACCAATGTTTTATCCCAGATGCA AAAATGACAATTTTTACCTTGAAATCTCTTCTGTATAATCATGTACATTTTATTTTAAAAACATAGCTTAAAAGGAAACA ATTTATTCCGTGAATTGAGTTTACAATTTTGTATGTCTTTTAAGATATTTTGCTGGATCTCCTATCAAACAAATGGTATA AAATTACCTAGTTTAACCTTTACTGATCGGAAAGTTTTGAATTCTTGAGTAGTTAATGTTGGTAACTAACTGATAATTTT TTTACTTGCAGAATGCATTCCAAATTACATATTTCTTGTGGATATGGGTACTGAAATCTCTTTATACCTTAATCTTAAAT AATGTCCTATTGTAGTTTATGTAGATTATGGTAAATGTCTGATTAATAAATGAATGATTCTTAATTTGCAGTATTGTTTT GGGCTGAGAAATTGTTTCCATGCTGACTACAAGCTTGCAATAATTAAAGTAGCTTTAGGGTAAGTGTTGAATTCTCTTTT TGCAGTAAAATGAAATGCATAAATGTGTGCATGTCATACTTAAACTTGACTGTTGCTGAAAACTTGTGGTAGTGGCTATC TTTGCATTTGAAAACAATAGAAAGAATATTGATCCCTTTAAAATTAGCATGAACTAATCTTATGAATTCTCGTGCTGTTT CAGCATCAGCGCGCTATGCCTCTGCAGCTACATCACTCTTCCATTATATGCTCTTGTTACTCAGGTGCTACATGCTTTTT TGTTTCCTGATCTTCTATGCTTTGATCAAAGTTTTGTTTCTTTTTCTGGGCTTAGCTTTTGTAAATGTAGAAGTGATTTT GAAAGATTTCAACGCGAAATTAAACATACTGTCCTACTTGCAAGCTACATAGATTCCTAGGTGGACTAATAGACTATGAT AATCACTTGCAGATGGGCTCTAGAATGAAAAAATCAATATTTGATGAACAAACATCAAAAGCCTTGAAGAAATGGCACAT GAATGTGAAAAAGAAGCAGGGGATAAAACTAGGGAAAACCAGTGTGAGAACCTTGGATGGAAGCACCCCTGGTTCAACCA CACCCTCTTCTGGCCCCACTCTGCACCGTTACAAAACCACCGGCCACTCAACTCGCACCATGTCTGCTTATGAGGATCAA GAGGATTACCAATCTGACATTGAACTGTCACCAACATCAAATCTGATAGTAAGAGTGGATCGAAGTGATGAGCAAGAAGC AAAAGAAAATGAACATCACAGCGTGGATGTGAGCAATGACCAACAACTTACAATGAGAGGTAGCTTCAAATTAGTCAAGC CTGATGATCCCCTTGCCCTTGAAAGAAGCATGAAATAGCATGACAATTATTCCATTCAACTAGTATCTGTTCATTTTCAT ATATGTTTACCATTTTTGTTAGATCTTGTTAGGTATTGGTATACTTATCAAAATTAATATAGAGTCGTTTGGATATCTGT TAGAAAGTATGAAATTAAGAAAATAACACATTCCGAGCCACTTTCAGTTGAAGTAGCATCGAGAATCGAGATATGTTATT TTTCCGTTTTCATACTTTGTGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTCATTTTGTGTGTATATATGTG TTTGGTCAAGTCATTTTGTGTATATGAAGAATCTGACATTGAAATTGCATGGGATGGGCCTTTCCAACAAGTGAAATAGA ACATTCGTTAGTAACTTGATAGTTTTTTTTTCTTAATAGGCCGAACTTTATACACTGAAGGCACTTGAGATACAAGTGCA ACCATGGTTTTTTTTGTTCAATAAACTTGATATCAGAGCAAGCCTTAAGCCCA
CDS sequence (LotjaGi4g1v0138400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTCTCAAAGTACAAAAGTTTGTCTCTTTGTCTGGTTTCATGGCTGTGCTATGGTGGAGTGTTGGCTATGGCTTC AAGTGAAGAGGGTAGTAGCAGTTCCAAAAACCTTGATCAGACACCAACATGGGCTGTTGCTTGTGTCTGCACTGTTTTCA TCTTGATATCTTTAGTTCTGGAGAAGGTTCTTCACAAAGTGGGAACGTGGCTACATGATAGGCACAAAAGGGCTCTCCTT GAAGCTCTGGAAAAGGTCAAAGCGGAGCTGATGATTTTAGGATTCCTTTCACTGCTTCTGACTTTTGGGCAGAGCTACAT TGTTAAAATATGTATTCCAGCCAATTTGGCAGACAAACTGTTGCCATGTCCATATACAGGAACCAACAAAGAATCAAGTA GTGAAGAGGAGCATCATAGGAAGCTTCTCTCTTATCAACGCAGAATTTTGTCAGATGATACTAGCTCTTACAAATGCAAG GAGGGACATGAGCCACTTATATCTGTCAATGGATTGCACCAGTTACACATTCTCATTTTCTTCTTAGCAATCCTTCACGT GCTTTACAGCGCTGTCACGATGCTTCTTGGGAGACTAAAGATACGAGGATGGAAAGCATGGGAGCAAGAAACTTCATCTC ATGGCTTTGAGTTTGCCAATGATCCTTCAAGATTCCGGCTTACACATGAAACATCATTTGTGAGAGCCCATGCTACTTTT TGGACAAGATACCCTATCTTCTTTTATATAGGATGCTTCTTTAGACAGTTTTATAGGTCAGTCGGTAAGGCTGACTACAC GACTTTGCGCAATGGATTTATTAGTGTCCACCTCTCTCCAGGAAGTAAATTTAACTTCCAAAAGTATATCAAAAGGTCCT TGGAGGATGACTTCAAGGTAGTTGTGGGAGTCAGTCCTGTCCTCTGGGCGTCGTTTGTTCTTTTCCTGCTCCTGAATGTT AATGGTTGGCATTCTATGTTTTGGGCATCCTTAATTCCTGTCACTATAATTTTGGCTGTTGGGACAAAACTTCAAGCCAC ATTGACGAAGATGGCTATTGAAATCACAGAAAAACATGCAGTTGTCCAAGGGATTCCACTAGTTCAAGGCTCAGACAAAT ACTTTTGGTTTGGCCGGCCTCAGTTAGTTCTTCACCTTATCCATTTTGCTTTGTTCCAGAATGCATTCCAAATTACATAT TTCTTGTGGATATGGTATTGTTTTGGGCTGAGAAATTGTTTCCATGCTGACTACAAGCTTGCAATAATTAAAGTAGCTTT AGGCATCAGCGCGCTATGCCTCTGCAGCTACATCACTCTTCCATTATATGCTCTTGTTACTCAGATGGGCTCTAGAATGA AAAAATCAATATTTGATGAACAAACATCAAAAGCCTTGAAGAAATGGCACATGAATGTGAAAAAGAAGCAGGGGATAAAA CTAGGGAAAACCAGTGTGAGAACCTTGGATGGAAGCACCCCTGGTTCAACCACACCCTCTTCTGGCCCCACTCTGCACCG TTACAAAACCACCGGCCACTCAACTCGCACCATGTCTGCTTATGAGGATCAAGAGGATTACCAATCTGACATTGAACTGT CACCAACATCAAATCTGATAGTAAGAGTGGATCGAAGTGATGAGCAAGAAGCAAAAGAAAATGAACATCACAGCGTGGAT GTGAGCAATGACCAACAACTTACAATGAGAGGTAGCTTCAAATTAGTCAAGCCTGATGATCCCCTTGCCCTTGAAAGAAG CATGAAATAG
Protein sequence (LotjaGi4g1v0138400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVSKYKSLSLCLVSWLCYGGVLAMASSEEGSSSSKNLDQTPTWAVACVCTVFILISLVLEKVLHKVGTWLHDRHKRALL EALEKVKAELMILGFLSLLLTFGQSYIVKICIPANLADKLLPCPYTGTNKESSSEEEHHRKLLSYQRRILSDDTSSYKCK EGHEPLISVNGLHQLHILIFFLAILHVLYSAVTMLLGRLKIRGWKAWEQETSSHGFEFANDPSRFRLTHETSFVRAHATF WTRYPIFFYIGCFFRQFYRSVGKADYTTLRNGFISVHLSPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWASFVLFLLLNV NGWHSMFWASLIPVTIILAVGTKLQATLTKMAIEITEKHAVVQGIPLVQGSDKYFWFGRPQLVLHLIHFALFQNAFQITY FLWIWYCFGLRNCFHADYKLAIIKVALGISALCLCSYITLPLYALVTQMGSRMKKSIFDEQTSKALKKWHMNVKKKQGIK LGKTSVRTLDGSTPGSTTPSSGPTLHRYKTTGHSTRTMSAYEDQEDYQSDIELSPTSNLIVRVDRSDEQEAKENEHHSVD VSNDQQLTMRGSFKLVKPDDPLALERSMK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| Phobius | 8 | 18 | 11 | - | – | |
| TMHMM | 9 | 28 | 20 | - | – | |
| Phobius | 19 | 26 | 8 | - | – | |
| Phobius | 27 | 41 | 15 | - | – | |
| PANTHER | 34 | 565 | 532 | 1.1E-276 | – | |
| PANTHER | 34 | 565 | 532 | 1.1E-276 | – | |
| Pfam | 36 | 498 | 463 | 1.3E-211 | ||
| Phobius | 42 | 65 | 24 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 66 | 85 | 20 | - | – | |
| Phobius | 86 | 107 | 22 | - | – | |
| TMHMM | 86 | 108 | 23 | - | – | |
| Phobius | 108 | 174 | 67 | - | – | |
| TMHMM | 175 | 197 | 23 | - | – | |
| Phobius | 175 | 196 | 22 | - | – | |
| Phobius | 197 | 297 | 101 | - | – | |
| Phobius | 298 | 317 | 20 | - | – | |
| TMHMM | 298 | 320 | 23 | - | – | |
| Phobius | 318 | 322 | 5 | - | – | |
| Phobius | 323 | 341 | 19 | - | – | |
| TMHMM | 325 | 342 | 18 | - | – | |
| Phobius | 342 | 381 | 40 | - | – | |
| Phobius | 382 | 405 | 24 | - | – | |
| TMHMM | 383 | 405 | 23 | - | – | |
| Phobius | 406 | 424 | 19 | - | – | |
| Phobius | 425 | 446 | 22 | - | – | |
| TMHMM | 425 | 447 | 23 | - | – | |
| Phobius | 447 | 589 | 143 | - | – | |
| MobiDBLite | 486 | 515 | 30 | - | – | |
| MobiDBLite | 547 | 589 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0138400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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