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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0157600 |
| Transcript ID | LotjaGi4g1v0157600.8 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amine oxidase; TAIR: AT2G42490.1 Copper amine oxidase family protein; Swiss-Prot: sp|Q07121|AMO1_ARTS1 Primary amine oxidase; TrEMBL-Plants: tr|A0A0S3R2H7|A0A0S3R2H7_PHAAN Amine oxidase; Found in the gene: LotjaGi4g1v0157600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:27477010..27483298) extracted from Lotus japonicus Gifu genome v1.2.
TTGCTATCTGTTGTTTATGCAATTCTTTGATGTGTCTGGTTGAAGAGGAACAATCGTAATTTTAAGGGTGTCTTCTTTAT CCCCGAATTTGCATAGAATTCGGATTATAGGCTAGCTTCTTTGTGGTGCTCTAGTATTGGATTCTTCAACTTTATGGCTG TCTCAGATTTGTAGAGAGTTTGAAGCCTTGTTGCGTACTGAGTTTCATGTACTGTTTTCGATTTTCTGTTCAATGTAATT TCTTCTTCTATCCGAAGTAAACAGACTATTTCCTATGGAATAGGTATCACAGTAATGGCGAGAGCTCAAACCTGCCATCC TTTGGATCCACTTTCTGCTGCTGAAATATCCGTTGCGGTATCAACTGTTCGGGCAGCTGGGGCCACACCTGAGGTACATT TGCCCATCAGACCATAACTAACTCCTCTCGGTATCATTGTTTTTGCGTGCTGACGAATTTCTTTGGTAATCTTGTTAGGT GAGGGATGGCATGCGGTTTATTGAAGCAGACTTGTTAGAGCCAGAAAAGCAAGTTGTTGCATTAGCAGATGCATATTTCT TCCCTCCTTTCCAATCGTCTCTGCTTGCAAGGACAAAAGGTGGACCAGTGATTCCAGCTAAACTTCCTCCAAGGAAAGCA AGATTAGTTGTTTATAATAAAAGGTCAAATGAGACAAGTATATGGATTGTTGAACTTACAGAAGTTCATGCAACCACTCG AGGTGGACACCATAGGGGCAAAGTGATTTCTTCTACAGTTGTTCCAGATGTTCAGCCTGCAATGGTAAATATATACTATT CATCCATTCTCTGTTCTTAATATAAATGGTGTAGCTTATTAAGATTTGTAGAATCTTCTTTGTCCCCGTGCTAATTGATC ATTGGATTATTTTACCTTTTTCTTTTCATTTTTTTATGTGGAAGTTTTTAACCTATGCCTGGCTCTAAGAATTTAGGGTG CATTTGGGTAAACAACTTAAATAAGCGCTTGTGACAATAAGCCGCTTATCACATAAACACTTATTGGTAAGCTAATTTGA GAAACTTATTGAAAGGAACTCAAAATAACTTAAGGTAGGTATTAGCGCTTATCCATAAGCTAATATAAAATTAATTCATA AGCATAGCCAAACACTTGCATAAGTTTTTATGCTATATGCCTATATGATAAGCTCAAATAAGCCCTTCCAAACGCGGCTT TGCTAACACTTTCATGAACTAGTTAAATAATGGAAGTCATACAGAACATTAACTGTTCTTTATTGACCTTAAAAAGCCGT TGGCACATCTGTGTAAGTTTTTTTATATTACTTTGTGGTGAGAGTTTGTTTACTTTGCAGAATATAAATGGCTTTGGAAA TACTTGCAAGGAGGAATTAGAGAATTGGAAGCACCACCTATAAGGTTGTGCTCGTCAATCCCAAGAAGTTGTGGGCACAA TTGTTATCTTTAATTGTATGACATTATTCACATTAGATATGTTGAAGTAATAAGATTTAGTCGTGTAGGTATTGAGGGAG GAAAAGGAATACTCAGAATTATTAATATTATATTAATGATATGCGGGATGTTATTTCAGAATACAAAGTACTAATCCATA ATTATAACAATAGATTCTTTATCCCAATTAAATAAGAAAACAAATCATGATATATATGGAACTATGGAAGGAAACCAATC CCAAAGAGGTAATCTAAGATACTCGATTATATTTTATGATAGCATAATGATGTGCTGACATATATTTCAATTTTTAAAAA AATCCCCCTCATGCAAAAGTTTACTTAGGGTAATGTTTGTCTCAAATAAACTCTTTATAATATGAAATCCTTGAAACATG ATTGGAAAGTCAATTTAGATAACAGTTAAGGCCAGACTGCATTTCGGGAAAGAGCCAGGGCAAGATTAAATCTGGGATAA GTGAGGCCAGACCACACCTAGGACAAAAGCTGGGGTCAACCACATGTGATAATGCTGAGGTCAAACTGCATTTAGGATAG CCAAGGCCAAATTGCATCTAAAATTGTCAGGGCAAAATTGCATCTATGGTAGTTTGGGGCTTGGGGTCAAACCATATTTA GGACAACATGTGGGATAGAAAGGCTAGGCTTTATTTGGGATAGTCAGAGGTTATTGGAAGGAGGACATGATGGTGAATCA AACCAATCTAAGGCTTTTGAGACAAGTTGTGGAAGTGGAAAGATAAAAGAATATAAGGCTTATGGGACAAGAGAGAACCT AAGAGAAAAGGGTGGATGAAATTTGTGCATGGCTGATCAGAAGAAAATAATCATGGAAATAATAACATTGTTACAATAGA GTTATAAATTTGAGGGAACTCAGCAGCGAAACAATGAAAATATAGCTCATCGGGGATGGCATCGCTTAATAGCTAGGGAA GTTATTGGGATATCCTTTATGTTTAGAAGGAGAAAAAGGGAATATTCAGATTAATAAAATTGTATTGATATGATGCGAAC AATATGTTGGATGTTATTTCAAAATACAAATCACTAATCTTTATTTATATTAACATCCAACTCTTAATCGTAGTTAAATA GAAAACAATATAGAAGGAAATATGAAAACAAATCCTGAGAAATAATCTAAGGTACTAACATATTTTATGATAGAATAATG ATGTGGTGAAATATTTTGCAGATATCTTATAAGAAATAATGTTAGCTTTTGGTTACAAATAAACTAGATAAATCCAAGAA GCACATGCATCTTTGACTTATAGATTCACTTGGAATTTTCATTTGTACAAGGGGAAAAATTCTATCAGTGACCCTTATTT CATGTTCTTAATCATGCTGATTTTGTAGACCTATTGTTATAGAACCAAATAATCAAACACCCTAAAAATTGTGTTTAGTT AATAATCATGCACACAAGTCCTCAATTTGCAAAAATAGTTGGGTGTTTGTATCCCTTTAAGCAAACCAATTTCTAAAGTT AAAGTAATACTGAAACTAGAAAGAAATTGGTAAGTGAATCACAAGATTGAAAATCTCCTACTCCTACTCAAATTCCTAAT TATGTACCAAAAAAGTGTCCCTAATTATCCATAAAAACCCTATTTCCATAATCGAATCCCAGTTCAAATTTGTCATCATT GTGTATAACCTATTCAAAATGGTTTCTCACTCGCATGAATGATGCCATATATATAAGTGCATCGAGGATTCAGAAGAATA TGAATAAGAATAATGATTCATAGACATAGGAATAGTAGAAACACCCCAAACACCCCTTTTTCCTGCGGATTTGGCCAAAT AATACACTGAACTAACCACCTAAATACACATGACTAACCATAAAGCACAGAACACAGTTCTGTTCTTTATGGTTAGTCAT GTGTATTTAGGTGGTTAGTTCAGTGTATTATTTGGCCAAATCCCTAATTTAGGAATTTCAATTTTACACGGTTCTGTGCT TTATGGTTAGTCATGTGTATTTAGGTGGTTAGTTCAGTGTATTATTTGGCCAAATCCCTAATTTAGGAATTTCAACTTTA CACGGTTCTGTGCTTTATGGTTAGTCATGTGTATTTAGGTGGTTAGTTCAGTGTATTATTTGGCCAAATCCCTAATTTAG GAATTTCAACTTTACACGGTTATGTGCTTTATGGTTAGTCATGTGTATTTAGGTGGTTAGTTCAGTGTATTATTTAGCCA AATCCGCAGGAAAAAGGGGTGTTTGGGGTGTTTCTACTATTCCTATGTATGAATGACAATTTACTCATGATTCGATGATA AAATAAGTACACATCATCGATTACTATTTATATTGGTTGTAGATGCAAGATACAATACTGTGAGACCGATCACTATGCAT ATCAGTTTCTAACTACACAGAAGTAACTTTTATGGCTAGCCCCAACTGATTCTGTTACTTCCATTCCTGCTCACTCTCTG CTGCTCCAGCTGAATCACTTGAAACTGAAGATACTACTACTACACTGTGATACTACTACTACACTGACATCCTTGTTCTT ATTTCTTGTCTTATAATGACCATTGTTTGCATTCTTCAGGATGCTGTGGAGTATGCTGAATGTGAAGCTGTTGTAAAGGA CTTTCCTCCATTTCGTGAAGCAATGAAGAAGAGAGGGATTGAGGATATGGATCTTGTGATGGTGGATCCCTGGTTAGTTA CTGCAACAAGATGATTTGTGTGACATTTTGTGACAATTTATTTAAGCCGTGCCTTATTGTTCTCTCTAATACTATTGGTG TTGAAACTTATAGGTGTGCTGGATATTATAGTGATGCTGATGCTCCTAGCCGAAGACTTGCTAAACCACTAATCTTTTGT AGGACTGAGAGTGACTGTCCTATGGAAAATGGCTATGCCCGTCCAGTTGATGGAATCCGTGTACTTGTTGATATGCAAAA TATGGTTGTTCTTGAGTTTGAAGACCGAAAACTTGTCCCCCTTCCACCTGCTGATCCACTAAGAAATTATACTTCCGGTG AAACCCGGGGAGGAGTTGACCGAAGTGATGTAAAACCCCTACAAATTATTCAACCTGAAGGTCCGAGTTTTCGTGTCAAT GGGCACTTCATTCAATGGCAAAAGGTGGTGCTTGTCTATGTACTTTTTCTAAAACTGTTATATATGAATCAAACTGAGAA CTGCTAAAACTCTTAGCGCTATTCGCAGTGGAACTTTCGCATTGGATTCACTCCTAAGGAAGGTTTAGTTATTCACTCCA TAGCCTATATTGATGGAAGTCGGGGCCGGAGGCCTGTGGCCCACAGGTTGAGTTTTGTTGAGATGGTGGTCCCTTATGGA GATCCAAATGATCCTCACTATAGGAAAAATGCTTTTGATGCTGGGGAAGATGGGCTTGGTAAAAATGCTCATTCTCTGAA GAAGGTCAGGGAGCTTGCCTATACTCTAGTCATTCTTTTCTTGATTCACACTCCTTTATCAATGTAGATGAAATTTTATT TTGTTTTGAATGATTTCATTATTTCAGGGTTGTGATTGTTTAGGCTATATCAAATACTTTGATGCACACTTCACAAACTT TTATGGAGGTGTTGAAACAATCGAGAATTGTGTTTGCTTGCATGAAGAAGATCATGGTATTTTGTGGAAGCATCAAGACT GGAGAACAGGTTTAGCTGAAGTTCGACGGTCTAGAAGGCTGACAGTGTCTTTTATATGCACTGTGGCTAACTATGAGTAT GGATTTTACTGGCACTTTTATCAGGCAAGTTAACTATCCATGCATTTATCTGTTGAACGATATTTGTAGAACCATCAATT ATGTTTTAGGCCAAGATATATATACTCCCTTTAAATACAGACAAGGAAGCATCTTAGCCTTCTTAGGTAGCTTGTCTAGT TGTCTTTCTGGTGGAGTTAATTTCTTGGACATCAACCATGCTAGTTAGTTGGTTCTCTCTTATATCTTCTTCCTTATTGC AGGATGGTAAAATAGAAGCTGAGGTCAAGCTCACAGGAGTTCTTAGCTTAGGAGCATTGCAACCTGGTGAAACTCGAAAA TATGGCACAACTATTGCACCGGGATTATATGCGCCTGTCCACCAACACTTTTTTGTTGCTCGTATGGACATGGCAGTAGA TTGTAAGCCTGGTGAAGCATTTAATCAGGTTAGCATGCAATTTTTCTTTCCAGTGAAAAAGGTCTTTAATACCAAAGGAA TAGTTTTCTTTCCCCCACCGGTGCAGTTCTTATAATAACAGCATATAGTAGAATTAGGTGTCTTGCATTCTATAGCATGT TAATATTCAGTCAAGAATAAATTGTGACTTGTCTTTTAAGAATGCCATTGATTAAGGGTAAGTAGTTTCTCTTATAATAA TCTCTTTTACTACTTGATACATGGGCTTTGGCATTACCGCCCTGGCTGTATGAGGTTTCATTTCTTTTACCTGAAGATTT TCCATTTTGAACTCCTTATTTTATGACTCAGTCTTCCTATCTATGGTTCCTTTTTTGCATCAATGTCTTTCTGTTCCATG ACTTACCTACAATTCGTGCCATTGTCATATAAAATGATAAAGTATGGACGGATATAATCCCTCTCTCTGCCCAGGTTGTT GAGGTGAATGTCAAAGTTGAAGAGCCAGGAGAGAATAATGTTCACAACAATGCATTTTATGCTGAGGAAAAACTACTTAA ATCAGAATTGGAAGCAATGCGCGATATTGACCCTTTATCTGCTCGTCATTGGATTGTAAGTTCTTTCCAAATATTTTTTA CCCAGAAAAGATAAGGGAATAAACAAAGGTTAAAGTTTTCCCTGGCTGA
CDS sequence (LotjaGi4g1v0157600.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGAGCTCAAACCTGCCATCCTTTGGATCCACTTTCTGCTGCTGAAATATCCGTTGCGGTATCAACTGTTCGGGC AGCTGGGGCCACACCTGAGGTGAGGGATGGCATGCGGTTTATTGAAGCAGACTTGTTAGAGCCAGAAAAGCAAGTTGTTG CATTAGCAGATGCATATTTCTTCCCTCCTTTCCAATCGTCTCTGCTTGCAAGGACAAAAGGTGGACCAGTGATTCCAGCT AAACTTCCTCCAAGGAAAGCAAGATTAGTTGTTTATAATAAAAGGTCAAATGAGACAAGTATATGGATTGTTGAACTTAC AGAAGTTCATGCAACCACTCGAGGTGGACACCATAGGGGCAAAGTGATTTCTTCTACAGTTGTTCCAGATGTTCAGCCTG CAATGGATGCTGTGGAGTATGCTGAATGTGAAGCTGTTGTAAAGGACTTTCCTCCATTTCGTGAAGCAATGAAGAAGAGA GGGATTGAGGATATGGATCTTGTGATGGTGGATCCCTGGTGTGCTGGATATTATAGTGATGCTGATGCTCCTAGCCGAAG ACTTGCTAAACCACTAATCTTTTGTAGGACTGAGAGTGACTGTCCTATGGAAAATGGCTATGCCCGTCCAGTTGATGGAA TCCGTGTACTTGTTGATATGCAAAATATGGTTGTTCTTGAGTTTGAAGACCGAAAACTTGTCCCCCTTCCACCTGCTGAT CCACTAAGAAATTATACTTCCGGTGAAACCCGGGGAGGAGTTGACCGAAGTGATGTAAAACCCCTACAAATTATTCAACC TGAAGGTCCGAGTTTTCGTGTCAATGGGCACTTCATTCAATGGCAAAAGTGGAACTTTCGCATTGGATTCACTCCTAAGG AAGGTTTAGTTATTCACTCCATAGCCTATATTGATGGAAGTCGGGGCCGGAGGCCTGTGGCCCACAGGTTGAGTTTTGTT GAGATGGTGGTCCCTTATGGAGATCCAAATGATCCTCACTATAGGAAAAATGCTTTTGATGCTGGGGAAGATGGGCTTGG TAAAAATGCTCATTCTCTGAAGAAGGGTTGTGATTGTTTAGGCTATATCAAATACTTTGATGCACACTTCACAAACTTTT ATGGAGGTGTTGAAACAATCGAGAATTGTGTTTGCTTGCATGAAGAAGATCATGGTATTTTGTGGAAGCATCAAGACTGG AGAACAGGTTTAGCTGAAGTTCGACGGTCTAGAAGGCTGACAGTGTCTTTTATATGCACTGTGGCTAACTATGAGTATGG ATTTTACTGGCACTTTTATCAGGATGGTAAAATAGAAGCTGAGGTCAAGCTCACAGGAGTTCTTAGCTTAGGAGCATTGC AACCTGGTGAAACTCGAAAATATGGCACAACTATTGCACCGGGATTATATGCGCCTGTCCACCAACACTTTTTTGTTGCT CGTATGGACATGGCAGTAGATTGTAAGCCTGGTGAAGCATTTAATCAGGTTGTTGAGGTGAATGTCAAAGTTGAAGAGCC AGGAGAGAATAATGTTCACAACAATGCATTTTATGCTGAGGAAAAACTACTTAAATCAGAATTGGAAGCAATGCGCGATA TTGACCCTTTATCTGCTCGTCATTGGATTGTAAGTTCTTTCCAAATATTTTTTACCCAGAAAAGATAA
Protein sequence (LotjaGi4g1v0157600.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARAQTCHPLDPLSAAEISVAVSTVRAAGATPEVRDGMRFIEADLLEPEKQVVALADAYFFPPFQSSLLARTKGGPVIPA KLPPRKARLVVYNKRSNETSIWIVELTEVHATTRGGHHRGKVISSTVVPDVQPAMDAVEYAECEAVVKDFPPFREAMKKR GIEDMDLVMVDPWCAGYYSDADAPSRRLAKPLIFCRTESDCPMENGYARPVDGIRVLVDMQNMVVLEFEDRKLVPLPPAD PLRNYTSGETRGGVDRSDVKPLQIIQPEGPSFRVNGHFIQWQKWNFRIGFTPKEGLVIHSIAYIDGSRGRRPVAHRLSFV EMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFYGGVETIENCVCLHEEDHGILWKHQDW RTGLAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGVLSLGALQPGETRKYGTTIAPGLYAPVHQHFFVA RMDMAVDCKPGEAFNQVVEVNVKVEEPGENNVHNNAFYAEEKLLKSELEAMRDIDPLSARHWIVSSFQIFFTQKR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 545 | 545 | 0.0 | – | |
| PANTHER | 1 | 545 | 545 | 0.0 | ||
| SUPERFAMILY | 5 | 133 | 129 | 2.88E-14 | ||
| Gene3D | 7 | 129 | 123 | 4.8E-11 | – | |
| Pfam | 8 | 97 | 90 | 6.3E-5 | ||
| SUPERFAMILY | 132 | 249 | 118 | 5.56E-31 | ||
| Pfam | 133 | 236 | 104 | 3.6E-30 | ||
| Gene3D | 138 | 241 | 104 | 3.4E-33 | – | |
| Gene3D | 248 | 548 | 301 | 1.1E-110 | ||
| SUPERFAMILY | 256 | 547 | 292 | 5.63E-104 | ||
| Pfam | 263 | 546 | 284 | 3.5E-105 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. | ||
| Molecular function | Primary amine oxidase activity | Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide. | ||
| Biological process | Amine metabolic process | The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. | ||
| Molecular function | Quinone binding | Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0157600.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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