Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0163100 |
| Transcript ID | LotjaGi4g1v0163100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gluconokinase; TAIR: AT2G16790.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q5T6J7|GNTK_HUMAN Probable gluconokinase; TrEMBL-Plants: tr|K7MRW8|K7MRW8_SOYBN Gluconokinase; Found in the gene: LotjaGi4g1v0163100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:30438312..30441190) extracted from Lotus japonicus Gifu genome v1.2.
CGAAGTGTTACGGATACCCTGTGTCCGAAAGAGTAGTTTTGACATTTTTTAAAAAATCTGGGGTGGCATTTCTAAGCCCT GGGTGCCAAATCCAGGGCTCCAACAAATGTGATTTTGAGATATTATCATTTGTCTATACCTTCTGTTCCTCTCTATTGTT CAATTCTCAAAGTCAAAGGATACAATTTTTCTGATCTCTGCGTCCCATACACCGCTATGGCTTCAAGCAACGGTAAATGA ATTACTATTCCTCAACGTACTTGTACACAATTAAATTCACATCTCAAATTGAAAACGTTAATGCATTTGTATTTTGGCAG GTGCAGTAATCGTGATCATGGGTGTCAGCGGAGCTGGAAAAACGTAAGTCTCCAAATCCATCTAATGGCTAAACCTCAGA TAAGATAATCACTTCATTTTGTACTTCTCTTTTTATAGATCCTTCATTTTGTTCTTATTTTGTTATTTTGCTGTCTTGGA AAATTTAGGTTTTTTCTCAATCTTCTACTTGCAAATAGATGATCCTTCATTGAGGTTGGGTTTCTTGGGGATCGGATAGG AAGGGAATGCAACAAACTAGAAGGAACTTAGAGGCTATAGAATCTGTTGGCACCTCGAGTAATCTTTGATTAGAAAATCG TTACGTTTGTTATCCCGGCCGACTGACAGGCTACAGAGACCCAAATTTATTTGAACCAAGAGAACCTATTGCACAAAATT GAATACAAGTACTCTCTCTATGTCTTTAGTAATTTTGGTTAAATAACAATCCTGATTTTTGAATACCCAAATACTATAGA TAACCCAGACATACATCTGATTTTTTCAGTGTATTTTTTCAGACAATCCTGATTTCACTCTCGTTTTAATTCGGATGTAG GGGTGTCTGGATAATATTTTCCTTAAAATAACTAACTGATTCAGAAAAAGAAAAAAAAAAACTAACTGATTCAGTGTATG GATTTGTTTGTTCTTTTTAAACCAGTTCTAAGAATTTTTTTTGAGATTTTATAATCTAAAAATGTGAGTTTTTGTGTGAA AATCAAGCAAAATCAAACATACTTTGCTTTTAATACCCGTTCTGAATGTTACCCCTGGAGGATATATGTGGTACTAGACA AAAAAAAAACATACTAGACCCTGATTTGTTAAGATTTTTCTCAGAAAAACTTAGCTGTTGGATAATTTTAAACAGCACAA TAGGTCGAAGGCTGGAAAAAGAGACAGGATATAAGTTTCTTGATGCTGATGATTTTCATTCTCAATCAAACAAAGGTGTG TACATGATGTGTATGCACAATTGTACAAACTCAATGCATCTTTGGCTGATAATATAGACTCATTAACTCCCTCACTTGTT TCTATCTGTTTCCTTTGTCCTCTACAACACAGAAAAGATGCGCATTGGAATCCCACTTACAGATGAGGACCGGATGCCGT GGCTTGAATCGCTGCGAGATGCCATTAGAAAACACTTAATTAACAAAACAGGTGTGGTTCTTGGTTGCTCTGCTTTGAAG AAGGAATATAGAGAAATACTTAGATCAGCTGAATCTGATTATAAATGGGGGAGTTATGCAAGTGCTGTTAACTTCATTCT ATTGGATGCTCCAGCTGAGGTGCTAAGTGTTCGGTTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCTTCTC TTCTGCAATCTCAGATAGATTTGCTTAGTGTTGATGAGTCTGAGGGAATACTTAGAGTTGATGCTACTCTTCGTCCTCAA TCTATTATCGACAACATTAAAAAAATGCACCAGTTTCAGGGCTGTTTTCAACCATGATTGTGTTGAGCCTCATCAGTAAA GTGGATCACCAACTCAGGTTAATTTGAACTGTTGTTGTACACACAAAAAGGAAGAAAATGATGATACAAAAAAAAGAGGA CTAGTTCGATTCATGTACTTCAATTTCTTTCCTTTTATATTTTTCTTTTTTCTTGTGTTTTTGACATGACTACCTCATTC TATGAGGATAAAACTAATCTCGATTGGATACCACTATTACATTACATATCCTACCAACAGATGACTTTTCCGCAATTTGT AAGGTGAAGGGTCAGGGTTCAAACCTTGGCTAAGGAACTAATTTACTAACAATTAACAACTAACATTTGCCTAATAAAAA AATTAAATTCTAATATCAAATATGTGACAGATCCTTTAACAGATGATTTTCCCGCGATTTGTATATCAAATAAGTTGTAC ATGCTTTGATGTCTTCGAAGTGTGATTTAATTTGTATACAATTTTGTTTCGTTAGATTGATATGTTGCTAGTTGTTACAT ACCTTTTCAAGAATCTCCTAGAATCTTCTGCATATATTAAAACTGTACCTTAATTATTGAATGTTATTATTCCTCATACG CGACATGTTATGATTAGTTGTCAGTGTAAAACAATGCATATCTATAAAACTCTTTAAATAATTCCCAAAAACATATTTTC AGCTAAACAAATCAACACAAACAAATTTATACAAAGAATTGATCGATCGAGTAACAACACTAAATTTGAATCTGACATCA TAATAAACAGTTAAGTTTCAATAAACGTTCCAAGAGGTATACTAATTGAGCTTAGAATTGCATGAGTCCTCAGCAGGATT AGCCTTGTTTTGCTTGGGATGTTTTCTTTGTTGTTATTTTTTTGCCTTGGTAAATCTGAGGCAACGGTACTTTTCACCAC TCACTGTAATTTCAAGAGCTCCATCTTGGTTATCTTGATTTGATGCAGTTCCCATTAACACACTTTTCTCTTTCTCAAGA TTGTCTCTTTCCATCTTCAGTCTTGCTTCTTGACGAGCAATCTCTGCCTGGAAAATAAAAAAGTAAAATATTCAGGACA
CDS sequence (LotjaGi4g1v0163100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACCCCTGGAGGATATATGTGGTACTAGACAAAAAAAAAACATACTAGACCCTGATTTGTTAAGATTTTTCTCAGA AAAACTTAGCTGTTGGATAATTTTAAACAGCACAATAGGTCGAAGGCTGGAAAAAGAGACAGGATATAAGTTTCTTGATG CTGATGATTTTCATTCTCAATCAAACAAAGAAAAGATGCGCATTGGAATCCCACTTACAGATGAGGACCGGATGCCGTGG CTTGAATCGCTGCGAGATGCCATTAGAAAACACTTAATTAACAAAACAGGTGTGGTTCTTGGTTGCTCTGCTTTGAAGAA GGAATATAGAGAAATACTTAGATCAGCTGAATCTGATTATAAATGGGGGAGTTATGCAAGTGCTGTTAACTTCATTCTAT TGGATGCTCCAGCTGAGGTGCTAAGTGTTCGGTTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCTTCTCTT CTGCAATCTCAGATAGATTTGCTTAGTGTTGATGAGTCTGAGGGAATACTTAGAGTTGATGCTACTCTTCGTCCTCAATC TATTATCGACAACATTAAAAAAATGCACCAGTTTCAGGGCTGTTTTCAACCATGA
Protein sequence (LotjaGi4g1v0163100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPLEDICGTRQKKNILDPDLLRFFSEKLSCWIILNSTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGIPLTDEDRMPW LESLRDAIRKHLINKTGVVLGCSALKKEYREILRSAESDYKWGSYASAVNFILLDAPAEVLSVRLNKRAAEGKHYMPASL LQSQIDLLSVDESEGILRVDATLRPQSIIDNIKKMHQFQGCFQP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 36 | 197 | 162 | 1.1E-46 | – | |
| PANTHER | 37 | 199 | 163 | 8.1E-56 | – | |
| PANTHER | 37 | 199 | 163 | 8.1E-56 | – | |
| TIGRFAM | 37 | 192 | 156 | 5.7E-37 | ||
| CDD | 37 | 174 | 138 | 1.85025E-45 | ||
| SUPERFAMILY | 37 | 195 | 159 | 4.07E-16 | ||
| Pfam | 37 | 150 | 114 | 7.3E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi4g1v0163100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…