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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0164200 |
| Transcript ID | LotjaGi4g1v0164200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase; TAIR: AT1G23870.1 trehalose-phosphatase/synthase 9; Swiss-Prot: sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 9; TrEMBL-Plants: tr|A0A151S1X1|A0A151S1X1_CAJCA Putative alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 10; Found in the gene: LotjaGi4g1v0164200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:30949027..30954359) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAATGAAAAAAAAATCTCACAGTTGCCGTTCTCGTTTCTTCTTCTTGCACCGAAACTGAAACCTCTCTCTCTAAAC GCAGCCTCTCACTTCGCCTTCCTCCGCTCGCCGTCGCTGTGAGAGTCGGAGCTCCTGACTCGCCGCCAGTTCTGACTACT AACGGTTAGTTTGTTCGCTGTGTTTTCTGATTGATCCCGTTCTTTGAATTGAATTTGTTTGTCACTGGTTTTTCCAAGTC TTGGCAGTTACAGCTTTTCCATTTTCCTCTGTTTTCTCGGGAAACAAACACTCTCAATCGTTCTCGTTTTCGTCTTTCTG TTTGGTTTGTGAATTGGTAGTTGTTGTGGTGTGGGTGTGAGTTCCGTGTTTCAGCGTCAAGTTTCATAATGTGATCATTG CTTCTGTCTTGGCTAGGAGTCTTGACCTTCTACTCTCTTGGATTTTTCCTTTTTTTTTTTTAATATTCCCATGGTGTTGG GATCTACAGTTTTCAAGTCCTTTATTTTATTTTATTTTTCTTGTTTATTTTTGTGCCCATAATTGTTTTTTTGTTTTAAT TACTGTTCTTGGTGATTCCTGGAAACTCACACTTTCAGTCACTTCACTGATTTTTAATTGAATCTTTTAGGGGTTTATCT TTCTCAGTTTCTCACATTTTAATCTTAGAGAATGGCACGTAATGTTGAATTCCTATAGAGTTCCGGCTGAGGATTATTTA TACTAGCAATGTATTTTGAACTGTGGAATCAATGTCAATGTGACAAAGATTCGTGCATGTGAATAGCATTGTCAATTATT TGTGGGGAATAGAATCTGTTTGTATTTTGGTGTGCCTAACTGCCTGTAATTAAGATGAAATTTCATTATCTTTTTCGAAC TGAATCCATCGTTGCTATTTTTAGGGTTAGCATTGTCAGTGATTTGTGAGGAATATAATGTGTCTGTATTTAGGTGTGCC CAACTTCCTGTAATTAACATGAAATTTCATTATCATTTTCAAACTGAATCCATTGTTGTTTTGTATTTTTGTTTGTGATG TTTCGTGATTTGGGATGAGCTAGCTCATAAACCAAAGAGGTATGTCATAAAACAAAATTGAAATTTCGGGGTGTGCATGG GAGTATTATGGTAGTATCGTTTTAGCACTTATTAGATGTAAACTGCATTATAAATGTCTTCTCTTTGTGAATGCAGTGCA GATTTTGTTTTCTAGTGTGGTGTTCATATTATTAAATTTTTTATACACACGTGGTGCCATGTTTCGCTCATACCAGTATG GAAAAGTTGTAAAGTGATGTACCTTCATCTAGTTGAAATAATTATATGATCATGATTGCCTTTAGTTTCTGTTCCACTTT TCTTCCTTGATCAGATACACACGTGGTGCCGTGTTCCGCTCATACTCGTATGGAAAAATCGTTAAGTGACGTGTCTTCAT CTAGTCGAAATAATTATATCATCATATGCGTGCCTTTACTTTCTGCTTCGCTTTTTGGTCTTATATTGCAGCTGAATCTC AACTACAGTTGCTTATTTTCATATTGTTTTGTCCTTTTTGGAAGCTTGGAGAGAAATAGATGCTATTAAGAGTTTGCTCA TTGCTTTTACCACAATTTTATCTTGTTGTCAACAATGAGATGAATCCGTTTAATGTTAGCCAAACTATTTCTTCAGAAAA ATCCATGTGTTAGTTAATATTCCAAGCTGAGTTATTGTTATTTACCCCCTGGTGCTTATTGTTCAGCAGACCACTGACTG AACTGCCTTGATTAGTAAAATTTGCACTAATGACAATCAATGAAGCAATTTGTTCAAGTGACAGTATGAGAACCAAGCTT GTTAATGTGCCGGAAATAAATCATAATGAGATTCAAGTCAGATATAGCTGCACAAGTATTTGTTCATAGTTTATACCATG TGAAATGCAGTCTTTGTCATTTTTTGTTACTTGGAGATCGATGATATTAATTGTAGGATTCTTATCTTAAATCTTGTGTT TTAAGTTATTCTTTTCTTATAGGTACTGGTTGATAGAAAGACAGATATTGAAGAAAGCTCTCCCTTGACTAATCATGGCA TCAAGGTCATATGCTAATCTCTTAGATTTAGCTGATGGAGACTTGCTTGATATTCCTCAGACCCCAAGACCTCTTCCAAG AATAATGACCGTTCCTGGAATTATTTCTGAACTGGATGATGGGAATTCAGATGTTAGCTCTTCTGCATGTCGGGAGCGGA AAATCATTGTGGCAAACATGCTGCCCGTGCAGGCTCTAAGAGATGCAAAAACTGCTAAATGGGGCTTCAGTTGGGATGAA GATTCCATTTTATTACAATTAAAAGATGGTTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCTCTCAAGGTTGAAAT TGATGTGAGTGAGCAGGAAGAAGTTGCCCAGAGGTTATTGGATGACTTTAATTGTGTACCCACCTTTCTACCCCATGATA TGCAGAAAAATTTCTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCTCTCTTTCATTATATGCTGCCCATATGCCCCGAT CATGGTGATCGCTTTGACCACTTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATCTTTTCAGATAAGGTTATGGAAGT AATTAATCCTGATGATGATTTTGTTTGGATTCATGACTATCACTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATATA ATCGAGTTAAACTTGGGTTCTTTCTGCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCTGTAAGGGATGAA ATTTTGAGGGGATTGTTAAATTCTGATTTAATTGGTTTTCATACATTCGACTATGCTCGTCACTTTCTTTCTTGCTGCAG TAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGGCTTGATTACTTTGGCCGCACTATATTTATTAAAA TTTTGCCTGTAGGCATTCACATGGTCAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAACTAAAAGAGGTT CAGGAAGAATTTAAGGGCAAGAAGGTAATTCTTGGTGTTGATGACATGGATATTTTTAAGGGCATCAGTCTGAAACTTCT AGCTGTGGAGCAGCTGCTGCAGCGGAATCCAGATTTGCTGGGCACCGTTGTCCTTGTTCAAATTGTAAATCCAGCAAGGG GGTCTGGGAAGGATGTCCAGGAAGCAAAGAAAGAAGCATATCTAATTGCACAAAGAATCAATGATGCTTATGGTTCAAAT CATTATAAGCCAGTCATTCTCATTGACCGTCCTGTTCCTCATTTTGAAAAGAGTGCCTATTATGCTGTTGCTGAATGTTG TATTGTCAATGCTGTAAGGGATGGCATGAACTTAGTCCCTTACAAATATGTTGTCTGCAGACAGGGAACTGCACAGCTGG ATGAAGCATTGGGTAAAAAAATTGATTCTCCTTGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCT CTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCTGTTGCTGATGCTCTGAACTTGGCCATTACAGTGAGTGA TTCAGAGAAGCGATTGCGCCATGAGAAACACTATCGGTATATTAGTTCTCATGATGTGGCATATTGGGCTCGCAGCTTTA TGCAGGATTTGGAGAGAGCCTGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGCTGGGGCCTAGGATTTAAAGTT GTTTCTCTTTCTCCTGGATTTAGGAAGTTGTCCGTTGACCATATTGTTTCAGCATACAAAAGAACCAATAGAAGGGCCCT CTTTCTTGATTATGATGGTACTGTTGTACCACAATCTTGTATGAATAAAATCCCCAGTTCAGAAGTCATATCTGTGCTAA ATTCTCTGTGTAATGATCCCAAGAATACTGTATTCATTGTAAGTGGAAGGGGAAGACATTCTCTGAGTGATTGGTTTACT TCATGCAAAATGCTGGGACTTGCAGCTGAACATGGGTACTTTTTAAGGTGTGCCATTTTACTGTTAACCACCTTAATATC TTCCTGCCCCCCGAAAGACTACAACACTAAGACGTTTTTAATCCTTTTTAATATTTGCAGGTGGAATAGAGATTCTGAAT GGGAAACTAGTCAGTTGTCTGCGGACCTTGATTGGAAAAAGACTGTGGAACCTGTCATGCAGCTGTATACAGAAACAACT GATGGATCTAATATTGAAGTTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCA AGCCAAGGAATTGTTGGATCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAGTTGTTAAGAGAGGCCAGCATATTGTTG AAGTCAAGCCACAGGTAGATATATTTTTTAATTCCTTTCCCTCGTCTCCCTTTATTTATATTTCTGTGAAATTCACGCTG GAAGGACTTAATCAGTGTTTGGCTTTGCTCTGCAGGGAGTGAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTCGGACTATG GTTAATGACGGTAATCCACCAGATTTTGTATTGTGCGTTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCATTTT GAAGACAGTCTCATGCCCGTCATTACCGTCGGTTCCAGAGATCTTTGCCTGCACTGTAGGTAGGAAGCCTAGCAAGGCCA AGTATTTTCTAGATGATACTTCTGATGTCTTAAAGATGCTCGAGGGCCTTGCTGCTTCATCCAATCCAAAGCCCAGGCAT GTTGCCCAATTCCAGGTTTTCTTTTAGAAATTTGATAGATGATAGACAGGGAAAGACATCATTATTGATTTTCATTATGC TGCGTTGCTTTTCTTCTCCTGTGCATCTGAGAAATTTTTAGTTTTAAAAAATTAACCTGATTAATGGAAACCTTTCTATT GCGGACCTGACTCTTCTTGGTGTCCTTAACCTGTCTGGATGGCATCGGGAACGTTTTTGTTAGGTAGTGCAGTTCATGAT CTGACAATTATTCTCTTGTACATGGTAACATCAATTGTTATGCATTCTGGTGCCGCCGAGTGCCGACACCTTGTCCTTGG ATTGTTAGGCCATACTGTTATTTGTACTTAAAAAGGGGCACCAGAACTCTAAGAATGTATAGTTACAGTATTTTGTTACA ATATATGATACCAATCTGGTTTGAGATCTCTTCGACTTGGTCATTGTCTATGAGCAGAGAAACAATTATTTACGGACATT TTTAGTTCTAGTCAGCTTGCAGTGTAATGATTTCTTATTCACAAGAAAATTTC
CDS sequence (LotjaGi4g1v0164200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCAAGGTCATATGCTAATCTCTTAGATTTAGCTGATGGAGACTTGCTTGATATTCCTCAGACCCCAAGACCTCT TCCAAGAATAATGACCGTTCCTGGAATTATTTCTGAACTGGATGATGGGAATTCAGATGTTAGCTCTTCTGCATGTCGGG AGCGGAAAATCATTGTGGCAAACATGCTGCCCGTGCAGGCTCTAAGAGATGCAAAAACTGCTAAATGGGGCTTCAGTTGG GATGAAGATTCCATTTTATTACAATTAAAAGATGGTTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCTCTCAAGGT TGAAATTGATGTGAGTGAGCAGGAAGAAGTTGCCCAGAGGTTATTGGATGACTTTAATTGTGTACCCACCTTTCTACCCC ATGATATGCAGAAAAATTTCTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCTCTCTTTCATTATATGCTGCCCATATGC CCCGATCATGGTGATCGCTTTGACCACTTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATCTTTTCAGATAAGGTTAT GGAAGTAATTAATCCTGATGATGATTTTGTTTGGATTCATGACTATCACTTGATGGTTTTGCCTACTTTCTTGAGGAAAC GATATAATCGAGTTAAACTTGGGTTCTTTCTGCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCTGTAAGG GATGAAATTTTGAGGGGATTGTTAAATTCTGATTTAATTGGTTTTCATACATTCGACTATGCTCGTCACTTTCTTTCTTG CTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGGCTTGATTACTTTGGCCGCACTATATTTA TTAAAATTTTGCCTGTAGGCATTCACATGGTCAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAACTAAAA GAGGTTCAGGAAGAATTTAAGGGCAAGAAGGTAATTCTTGGTGTTGATGACATGGATATTTTTAAGGGCATCAGTCTGAA ACTTCTAGCTGTGGAGCAGCTGCTGCAGCGGAATCCAGATTTGCTGGGCACCGTTGTCCTTGTTCAAATTGTAAATCCAG CAAGGGGGTCTGGGAAGGATGTCCAGGAAGCAAAGAAAGAAGCATATCTAATTGCACAAAGAATCAATGATGCTTATGGT TCAAATCATTATAAGCCAGTCATTCTCATTGACCGTCCTGTTCCTCATTTTGAAAAGAGTGCCTATTATGCTGTTGCTGA ATGTTGTATTGTCAATGCTGTAAGGGATGGCATGAACTTAGTCCCTTACAAATATGTTGTCTGCAGACAGGGAACTGCAC AGCTGGATGAAGCATTGGGTAAAAAAATTGATTCTCCTTGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCA CCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCTGTTGCTGATGCTCTGAACTTGGCCATTACAGT GAGTGATTCAGAGAAGCGATTGCGCCATGAGAAACACTATCGGTATATTAGTTCTCATGATGTGGCATATTGGGCTCGCA GCTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGCTGGGGCCTAGGATTT AAAGTTGTTTCTCTTTCTCCTGGATTTAGGAAGTTGTCCGTTGACCATATTGTTTCAGCATACAAAAGAACCAATAGAAG GGCCCTCTTTCTTGATTATGATGGTACTGTTGTACCACAATCTTGTATGAATAAAATCCCCAGTTCAGAAGTCATATCTG TGCTAAATTCTCTGTGTAATGATCCCAAGAATACTGTATTCATTGTAAGTGGAAGGGGAAGACATTCTCTGAGTGATTGG TTTACTTCATGCAAAATGCTGGGACTTGCAGCTGAACATGGGTACTTTTTAAGGTGGAATAGAGATTCTGAATGGGAAAC TAGTCAGTTGTCTGCGGACCTTGATTGGAAAAAGACTGTGGAACCTGTCATGCAGCTGTATACAGAAACAACTGATGGAT CTAATATTGAAGTTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAG GAATTGTTGGATCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAGTTGTTAAGAGAGGCCAGCATATTGTTGAAGTCAA GCCACAGGGAGTGAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTCGGACTATGGTTAATGACGGTAATCCACCAGATTTTG TATTGTGCGTTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCATTTTGAAGACAGTCTCATGCCCGTCATTACCG TCGGTTCCAGAGATCTTTGCCTGCACTGTAGGTAGGAAGCCTAGCAAGGCCAAGTATTTTCTAGATGATACTTCTGATGT CTTAAAGATGCTCGAGGGCCTTGCTGCTTCATCCAATCCAAAGCCCAGGCATGTTGCCCAATTCCAGGTTTTCTTTTAG
Protein sequence (LotjaGi4g1v0164200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASRSYANLLDLADGDLLDIPQTPRPLPRIMTVPGIISELDDGNSDVSSSACRERKIIVANMLPVQALRDAKTAKWGFSW DEDSILLQLKDGFSSDTEVIYVGSLKVEIDVSEQEEVAQRLLDDFNCVPTFLPHDMQKNFYLGFCKQQLWPLFHYMLPIC PDHGDRFDHLLWQAYVSANKIFSDKVMEVINPDDDFVWIHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVR DEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMVRLESVLNLPSTSAKLK EVQEEFKGKKVILGVDDMDIFKGISLKLLAVEQLLQRNPDLLGTVVLVQIVNPARGSGKDVQEAKKEAYLIAQRINDAYG SNHYKPVILIDRPVPHFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTAQLDEALGKKIDSPCTSMLVVSEFIGCS PSLSGAIRVNPWDIDAVADALNLAITVSDSEKRLRHEKHYRYISSHDVAYWARSFMQDLERACKDHYTKRCWGIGWGLGF KVVSLSPGFRKLSVDHIVSAYKRTNRRALFLDYDGTVVPQSCMNKIPSSEVISVLNSLCNDPKNTVFIVSGRGRHSLSDW FTSCKMLGLAAEHGYFLRWNRDSEWETSQLSADLDWKKTVEPVMQLYTETTDGSNIEVKESALVWHHQDADPDFGSCQAK ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLRTMVNDGNPPDFVLCVGDDRSDEDMFESILKTVSCPSLP SVPEIFACTVGRKPSKAKYFLDDTSDVLKMLEGLAASSNPKPRHVAQFQVFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 31 | 838 | 808 | 0.0 | – | |
| PANTHER | 31 | 838 | 808 | 0.0 | – | |
| Gene3D | 46 | 314 | 269 | 1.2E-78 | – | |
| SUPERFAMILY | 55 | 544 | 490 | 4.47E-146 | – | |
| Pfam | 55 | 540 | 486 | 1.7E-184 | ||
| CDD | 55 | 540 | 486 | 0.0 | – | |
| Gene3D | 315 | 525 | 211 | 3.0E-72 | – | |
| TIGRFAM | 585 | 835 | 251 | 1.3E-37 | ||
| Gene3D | 586 | 698 | 113 | 2.0E-14 | ||
| SUPERFAMILY | 587 | 835 | 249 | 5.31E-48 | ||
| CDD | 588 | 829 | 242 | 5.35483E-75 | – | |
| TIGRFAM | 589 | 789 | 201 | 4.8E-19 | ||
| Pfam | 590 | 825 | 236 | 9.7E-81 | ||
| Gene3D | 716 | 847 | 132 | 7.3E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi4g1v0164200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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