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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0170200 |
| Transcript ID | LotjaGi4g1v0170200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tetraspanin family protein; TAIR: AT5G46700.1 Tetraspanin family protein; Swiss-Prot: sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2; TrEMBL-Plants: tr|A0A151R7W1|A0A151R7W1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0170200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:32935011..32946339) extracted from Lotus japonicus Gifu genome v1.2.
CCTTAGTTATTATCAATAGCGAACTGGACCAGACCGACCAGTTTAATTGGTTTGACCGCTAACCAGGCCACGATCTTTCC CGGACAATCACCCATCAAACCCATGAAAACCAGCCATCTCAGTTTGAATTGACAGTTCGAGCATTTTGCACAAAAATACC ATGTTTTGGAAAACAAAAATTATTGGCTTATAGGGAATGGGAGACTTGATCCAATTAAATGAAACAAGGGCATGTCAAAA AGAATTACTGACCCAACAATTTCCCATCTCACAGGAACCCTAACACTTCCTAATTTCTTCCCAATTGGACCTAGCTCCCT TCCAGCCTTTGCATTCGTGAGTCAACATAATTCTTGCAGGAGTGATTAGTATTCACATACCCAAAGGGGTCAAAAATGAC CAAACATGGTCTTATTTACAGATCCGTCAGAGCTTATTGGGCCTGGGACTTTTTTGGGCCTTGTCCTCCGGTGCATTCCA ACTGGTTCTTTTACTAATTAATCAATGGCAGAAGGAACTTTTTGGCAAGAAAAACGGTATTTTCATAAAAATAATAATAA CGTATGAAAAAAACAAGGGATATGCATAAACAAGGACATGTACCCTAAGAAATACATTAATGTTTCACGAATCACGCTAC ACTGTCGTCACAATGCTTTTAGATCGGCATAAAACACGTTTGTTTTAAATTTCCCACTTTATGGCTGTAAAAATCACAAC AAAATAGCTATTTGGACATTTCCATGTGATCTGCAATTGCAAGCACCAGAACAAATATATGCAAATTAAGTACCATAACA TACCTCTACACATCTTCATTGACATGAGTAAAAATAAGTTAAGACATGATGATTAGTTTAAAATACAACAAGTTGATTCA TTTACACTCTTTATTTTTCTACTTAATTTTTTTTTCTATCACATCACATATCAAATATTATAATTTCTCATTTTTTTTCC TATTTATCACCCCTCCACATCTTTCACACTCATTGTGAGTGTGAAGAAAACGTCACATGAAATAAAGTGTGAATTTGTAC TGTACCAAAAAGAAAAGTTTGAATTTGTTTTACAATCACTGGTAGAATAGTTTGATTGCTAAAAGGTTCCTCGGAAGATA TGGGAAGCAATCCAGCTCACATGCTAGCTGCAAAGGCAACCGGACACGTGGATTCTTTCTTCGGATGTAGTCCAAGACCT GCGCAATACATTACTCTATTTGCTGTAATTTACTATTTTTCCCTTTTTTCCTACTCCCTCCCTTTTCTTTTCTATTTTTT AAGGTACGTCATTACCGCCGGCAGTTAATATGATTAATCTCTCAAGACTTAGAGATTATGTAAAGTAGCTAGGTAGGCGC GCATTTTCCCAAAATTTTTATCTCTATTCCAAATACCTTAGAATGGAAGCCTGAATTAAATGTTTAAGACGTCAAAACTA TATGTCTATATCTATGATTTGTTCTACACCTTGATTCTCTGCTCCCTAACTTCCAATGTACAAGTGTGCAAGGTATTCAG ATTCCTTTTCAAAAAGGTTATGCTAGCCGGCCCAAAGTAACGTGGCTTAAATATCAAAATCCCAATTCTTAAACTATCAT AGCTTGCTCTAGAATCCTTCAGGTATCCAAGGTAATTAAGAAACAAATTTAATTATTTGGGGCTAGACATATATACATTA CTCTCTAACCAGGCCATCCTAATTTAACTTTCTTTAACAGAAATGGCATTGAGTAACAATGTAATAGGAGCCATTAACTT CATTGCTGTGCTCCTATCAATCCCAATCATTGGTGCTGGGATCTGGCTAACAACCGAGCCAGCCGATTCATGCGTCAAAA TCCTACAATGGCCCGTCATCGTTCTAGGGGTTTTGGTCTTTGTGGTGGCTCTGGCCGGGTTCATCGGAGCCTTTTGGAGA ATCCCCTCGCTTCTCGTGTTCTACCTTGTTTCCATGTTTGTGCTCATTGTGTTGCTCGTTTCATTGGTGATTTTTGTCTA TGCGGTCACGCTTAGAGGCCATGGAGATATTGAACCCAATCGGTCATACTTGGAATATCAGATGGATGATTTCTCTATTT GGCTTCGTCGAAGGGTGAGAAGCTCGAACAAGTGGGATCACATTAGAAGCTGTATTAGCTCCTCAAACACGTGTGCTGAG TTGAACCAACGTTATCGACTTGCTCAGGACTTCTTTGATGCACACTTATCTCCCATGCAGGTAAGCCCATTAGTCACTAC TCTATGTTAACCCTATCAAATACTAATAGTTTTCATTGGTTAGTAATCCAGACAAATATAGTATTGGAGACTCTCTGCCC TTCTTTTTTCCTTCTAAGGCCCCGTTTGGAAGAGCTTATTTGAGCTTATCTAATAGCATAAGCGCTTATATGCCAGTGTT TGACACTTGTACAAACAACTTATGGCCTACCATAAGCTGTTTTGAACTTATTTTCATAAGTTATTCAAGATAGCTTATGA AAAAGAATTTATGCTTATATATAACTTATTTTCAATTTATTTTAATAAAAAATTTAAAATAGCTTATGACATAAGCGCTT AAGTAAGTTTTTTTCCCAAACGGGACCTAAAACCTATCTCATAAGCGATTATGCACTTTGAGTTCTCAAAGATAAATATG AAAATTTTAATCTTGTAATGACTGAAGTTACCTCAATGTTCAAAATAATACCTAAAAGTGTCGATCGTGTTAGAAAAATA ATATAAAATTATTCATGTGGTTCTTACCCAACAGTATAAGCTTTTGGGATAATTGGTTACTTGACATGCATGGTATTAGA GCCTTTATGATCAAGCGGTCCAGGGTTCGATCTTTGCTGCCCTAATTCTTATAACATAAAAGTTGAATTTAAGCACATAG TATAACCTTGTGCATTTATTCACTCTAGCTTAAAACCCAAAAAAGACTCTTGCACGAGGGAGCGTATTAGAGAAATAATA TAAAATCATTCATGTGAACCTTACCCAACAGCTTTAAATTTTAGAATAATTGGTTACTTGACAGATCGATCGTTGTGGTA GAAAATGATTGTTTTAACCCCTTGGTCGAGAGTTCGATTCCTCGAGCCGCACACTTGGGGAGCGACCTAGCTTTGACCTT CACTACATTCGAGTTAAAATTGCGCGAACAATTTAACACAATAAAAAAATTCAAAATAATGATTTACTCATTTTTGTTTG TTAACCTATTTAAACTTCTTGAGAAAGCGTGGTTTCCATATCTGCCATTGTTTTACTTCAATAATTTACTAGATTTTGCA TTCCCTTCTAAACACATTCTTGTTCATTAAGTAAATTAATTATTCTTAAAGTAACCTCCTCAAATCAATTTCAGAAGTCC ACTTTCTTATCAAAAGAAGGAGGAACGAACGAAAAAGCTGAAGATTTAATTAACCAAGATTCTTATACCATGTGTTTTCC TTGCATTTTTTTCCCCTCAAGTCCTTTTACTTTTAATTTTAAATTTCTTCTGTTCTTTCTTTTCATGTAGTCAGGGTGCT GTAAGCCACCAACCAAATGTGGCTACACATTTGTGAACCCAACCTATTGGATTAGCCCAATTGACAACGCTGCAGACAAG GATTGCATGCAATGGAGCAACGAACCAACAAAACTTTGCTATAACTGCGACTCATGCAAGGCTGGTTTATTGGCAACCCT TAGAACCGAGTGGAGGAGAGCTAATGTCATATTGATCGTTGCCGTGGTGGCTTTAATTGTAGTGTATCTGATGGGGTGGT TTGCCTTTAGAAATGCCAAAACTGAGGAGCTCTTTCGCAAATACAAGCAAGGCTACACTTAAGAAGGTCCCAAAATGTAA ATTTTAGTTTGTATTGGACACTTACTGAGTTGAACGAGCTTCCTGTTTTATGTTTGCTTTCAAAAAAAAATATGTTTGAT GCTGCGAAAGGATAGTTCAATTAAACAGAGATTTTTTTTCTTCACAAAAGAGGCGTTGATTGGTGAATACGTTTTTTTCA TTCATGATTTCATGCGAATTGATTGCACCTTACCAGTAACACAGGTCTGGAACTATACTCCGCAGATCATTTTAAATCAG GAAATGATATGAGTAGGCTTTAAAAATTTCAAAACTCAGCAATTTGTTACGAGTATTGGTTACTTAGGCCCCCATTCGGG CTATTTGCCCATTTTCACTATTTGATTTTAAAATGCGTGTTCAAAAAAAAATAGAGTTGATGTGAGTTTTTATTGATTTA AAACCGTCTTTTAGCCTGTTTTTCAATACCACAAAATATGGTTAAGTGATTATGATTTTTAGTTTTAATAACATGTAATA TCATCACCATCACCACGACCACCACCACTACAACCACAACCACCTTCACCGCACCGCCGCCTCCACCACCATCATTGTCA TCAATTAATCTCCACCGCTACCACTTCCACTTCCACATGCATCCTCCATCCGTGCCACCCCTGCCATCACCACCCTATAT ATGCGTGTATGTGTGTGTGCGCGCGCATATATGTGACATTGCATCTTAGGATTAAATTACGCGTAGTCGAGAAGTCGGTA AGTCATTTAGGACAACCGACAATAGAAAGTACCAAAGGCATGGTCGCCATAACCCCGATAATGTATAGAACTCGAGATAT AGGGAGAGTAGAGGTGGGAAAACGGCTGATCACATCTCTTGACAATGAAGAGTCATTGTCTCAAATTGATCGAAACCCTA ACCTAATCGAAAGAATGAGACCCTGATCATTCAAATAAGATGATCTGAACTTTCAGAGGGGAAATACACTCTTAATAATC TGCAGCTGACCCAAAATAGTGTAGCATAGTACCATTTTTGTCTCGACCTAAAGACATAATAAAATTATCGACCAACCGGT GGGAGGCGACACTATTCATCCATGATGACAAGGCTACTATTCAACCATGATGGCTTCAATTTCCCATGAACCCTTCCTAC ATGCGGCCTGGACATGGCAAAGCCCACATAATGCCTAGGTTCAGAATGCTTAAGCTCCATGCATGAAGAGCCATTGGTGG TGCAACTAAGCTTAAGCCTAATCTTGATTTTCAATTTTAATGACCTTTCAGCCTATAAAACGACCCACAATGAATCCTTT GAGTCCTCTGCAATTCATTCTAAGTCCTAGAAGCTAGATAGGTTGAGAAGAGAGCTCGAAAAGAGAGAAAAACCGAGAGG AGGTTCAAGAACTTCATCTCTTCAAATCTCCCAAACCATTGAGTGTTAGTGAGAAATTCTTGTCCAATTACGCTTCTGGA GGGAATATGAAGTGATCTGGGTTGGTTTGGCAAAGCTTTGGACGAAGGAAACACGAAAACGATGAAGTTCTGAGTTTTCC GGTGAGCAATTCCAGATTTTGGCAAGCTTTATCACTGCAACTCGACTTTTCAGGCAATCTCGTCCACTTCAGAGCCACCC ACCATCATTGTTCTTCTCCCCATCACCTGTAGAACAAGACCCTATGCTCAGAACAGCTCCGGCGTGATGATCTTCAACAC CTCTGACGGTCCGGTCGTCTTCTCCGGCGAGTTGTAACAGTGAGTTCTCTGAAACTCGCTAATTCTTCACGTTTTTCGAT CCAAAACTTACCCTTAAGCATGTTAGAACAATTTTAGGAAGTTTTAGAGTAGTTTTAAGCCCTGGAACCTTAAGAATCGA GACAACCAATTTGAAGAGCTTTAACCTCGGTTTTCTCTTCGAATTGAGCTTTTGGAAGTGAATTAGAGCACCACGATGAT TGGATTATACTTCAGGAAGATGATAAAATGTGTTAGTATAGCTAGAACTAAGGATTAAGCCCTGAGATGAAAAACCCCAA TTTCACCTCGACTAGATTTGAAAATGGAAAATTGAGTAGGATTCATTGATCTTTAGCCTCTGAAACTAGTCTAGTTAGTC TCAGAAGGTAGGAAATTTTAGGAATAGAGTATTAGAAGTAATTTTTAGGCTTAGTATACAAGTTTCTTAATTTCTAAGTA AGCTTTGAATTTTGAGGAACTTTAGGATAAATGGCATGCTCAGATAGTTGATTATGACCTTAATTATGTGCTGAGAATGC TGATTAAAGATGATAAAAGACATGAGGTCAGTAGGATAGGTTGTGAAATAAAAGTTAGATTAATAGCTTAAAGAGCAAGT TTAATTTGCATGAAATGACTTAAGTAATGACTTAAGATTATAGACTAGGATTAAGTAAGGTTAAGTAGTTAGTAATTTAG GGATATGGTTAAGAATGAAGAACATAGGCAGATTAGAACAAGAATTAGGAGAAATGATCAATCAAGAACATAAGACACCT AAAGAAAATAAAACAATTCATAAGTTAACTTAGAATTTTGACAAATGAACTTATAATAACCCTAGCATAATCAATGATGC AGAGAGTGAAGATTGAGGCTCTCAAGACCCAGAGTCACTAAGAGTTGAAGGTAAGAGGGTTAGACAAGACCTTGGCTTGG TACATAGCTTACGAGCTAACTGTTATTATGATAGAAAACATATTGTTACTTACCTATATATTATTGGATGCATGATTGAA TGATATGCTTATTCCATGATGAATTACTTGAACTGTAATACTAAATTGCTATGATTGTGATTCATGATGTGATTTCCTGT GCATGATTGGTATGTTGCCCTGTTAGAAATGGATAATAGTACGTCATGGGAAATGGAGGTACTTAGGATTAATGGTCTTA TGACATGGTATCAGTATTGTCCCTGGTACTAAAGCATCTGAGGTAGGAGGAAGAGGAAAATTAATCCCCGGCTTAATGCG TTATTGATACTTTCTTTTCGAAACTAAGCCTACCCATCATCAGTTAGGTATTTCCCTTAGGATAGGTAGTCTAAAGTAAA TGAAATATGATAAAGAAATAGGCAAGTGAACCCTTTTCAATCAAGAAATCAAAAGTACATAACCATTAACGGTGGAATAA GGTTTCCTGCTTAAATTCCTGACTACCTGATCTCATCAGAGATCCGCCTTCATAATGCATGAAGTACACTTACCCCCAAA AGTAAGGATGCGGATGCTTGTTTCTAGTTAGCTAGAAACCTAATGGATGAATAAGGGGGCGATGATTGATACTTGAAAAC ACACCCTTGGAGTAACAAGGAGTAGGAAAGTGTTGCCACTACCACTATGGAGAGTGGGAATATAGAGACGTCAAAGGTGG TCATCTTTAGAGATGAATTGACCCGGGATCTACACGATGGTTCCACCTCTCTATCAGCTACCGGCAGGGTCCCAGGAAAG GCTGACCTGATATGAAGTATCAAGAACCAGGTAGTCGTGTATTTCTGTCTGTGAGCTACTGAGCGATCATTGTCCGGTAA AGAGTGAATTGTCCGGAATGTCCATGTTCCCGAGACGACTTTCCAAAGATAATGAAGCTACGGGTTCAGGCCCTAAAAAC ATACTTATTACATGATAAAGGAATAAAATAAAAAGGTTAGCGAAGGACTCTATGCATTATATTCCTTGTGTTTGCTAATA TGTATGTATTTAATGATATGTTGACTTGACTTCTAACGCTTATCTCATATGATGTGTATTATGTACAATGGTGTGTTTGA CTCACCTTTGCACTTATTTTTCATAAAAGCATATAACAAGTGCTTAGATGAGTTTCCCTCTGGTCATCGCAGTCCATACT GACTTCCCAGCACGCGCCGATTGGCATATGGATCCTAACACTGGCTATTGTTCATATCATGGCATCACTGTTTTGTGGTG CAGGGAACCAGGTTTAGGACATATTGGCTTCTCGTTGACTCTTCCGATGATGTTCTCATTCTTCTACCCACTCATGCCCA GCGGATGTTCTCATTCTTCTCGCTGAGTCATTCCAATCATATCAGGTAGCCTTCAGTTGCCGACTCCACCATCGGATGTG CCTATGGACCCGGGAGAGCCTTTACCAGCAGTACCCATCAGGGCGGTGAGTCCACACCTTGATGAAGGACCGTAGGCCCG TGAGTCCGTTGGGTCACCTCCACCTAGGAGGAGTGCCCTGTGCTTACGGGTGATGGCTCGTAAGCGGGTGAGATCACCCA GGTTTTCGAGAGTCGCCAGGTTGTACTGTAGGAGATTTCAGAGGGGCTGAACTTCAGAGGTCAGGGAGTAAGTGCCAGAT TCCGTGCCGGAGCCAGTGCCTGCTGAGGATAAAGGCGAGGGAGAGGAAGACCCGGAGGAGGAGATGGGGGAATGAAGCAG TCGGTCCGATGATCTTATGATTACTATTTCTGATTAATTTGTATTCTGACTTATTTATCCGTACTCAGAGGGCTCTGTGT CCTCACTAGACTATCTTCTGTGTGCTTGTGGTTTGCGTGGTGGACTTGTTCATCACATATGTATGTCATGTGTGTTTGTG TGCATTATTACCCTCAGTGGTAGTTCTCTACCCTAGTGGTCCCGATGGTTGATGAGGGAAACGCTAACAAAGTAGAATCG GCAAGTAGTAGAAAAAAAATAGGGTCGCGTCGCTCGCTCCTAAGTTTTGGGATTTGGGCGGATTCGTCACTCATGGAAAG GGGACGCGACACCACCATCACCACAATAGACACTGTCACCAGCGTCAGGTAACATCGAAACTGGACCACCGCTTCTATTG GCCATTCCATTATTATGTTGCCGCTACCACCCATTGTTGTGAATTCAAAAAGTTGATAATTGGTGTGACTATTATGAATT TACAAAGTTGATGAAATGTTTTTTAAAACTCTAAACCACAAGAAACAAAAGCTGGATTTATAAACTGAAAACTAGTTTTA ATTTTTAAAAGTCTTAAAATGTAAAATTAAAAACCACCCCGAGTGGGCCTTAGCTATTTTGGTTTAGGTCCTTAGTTTGT TATATAAGTTGGTTGCTAGTTAGTTACTTTACTATGTCCTCTTGTAATAATAATGTTCAGATTAATTGTATCATTGTAAT AATCTTTTCAATCATAATGGATCATCCTTGGTTTACCCTTTTTTTTCTCAAGAGCTCTCTCTTCCTTATTGTTCCTTGAC CATCACCCTATTTTACTTATATATGGTATGTGTTTTTCTTCGGGGGCATGTATATACATTTAAAAGTGGGAAATGTTGCA GTAATTTTATTTTTCTTCAGGGCGTGCATAGAAATATAAATTACGAATTTTTTATATTAATCTTCTAAACATTTTGAGTT TCGAAATCATTTATTAGAGTTTTATAATAAAGCATTACTAATATTTCACTTTCAATAGATCAGATAGATAACTCAAATAA ATATCGTATAAAAGAACTAACAGGATTATGAGTAAACATGAATTAATTTTTTATTTTGCGAATGTAAAAATAACGCATAT TGTATTTAGGGTGATTGTTTTGGTGCCACCCCAATTGATTATCATGTCATTTTTTTTTTTACTTTACTAACATACTCTTA AAAACAATTTTCATCTCTTACCTATCTTCTTCCTATCTTTCACCAACCTCACCACCACTGTTCTCTTTCTATCCTTCACC ATCCACTATCTTCTTCTTCTTCAATCTCCACCATTGTCACCACCATTCATCCTCTTCCTTTTCTTCATCAATTAACATTC GTTCACCACCATTCTCTTCCCACATTAAACCTACCTCACCTACAATCATCTTCTTTATCTCACCCACCTACATCACTCGT GTAACACCCCGATTTTCGGGTGCCACGGTAGTAACATGTTAAAGTAAATATGCAATCTTTTCCAAAAGGGATTTATAAAT GTGAGTATTTATTTTTTTTTCCTTTTCGAAGTGTTTCTAAAATATGTAATGCATACTCCCAACCGTAAATAATTTACATC TGGCCTCGATCAAGGCACAGCATAGAGTACATGACAAATAAACTAAGATCCAACAACGGACTCACTATGCAATGACTCCA TAAATCCGATATACTCCCTATTATTTCCACACTGAGTAACCATAGGAAAGCAATGCACCGGAACCTACCCGAAACCTTAA ATACAAATCATAAAATGATCCTGCAAGCTTAAACCAATAACGGTAAGCTTTTCTACCCAAAGGCTCTAGCCCTACACCCG ACTCTATTCTTCGAGTCTTCTATAGATCTTCCAAGTGGAGTAGCATCTGCTCACATCACCTCCTTTCGTCGTCTGGCAGC AGGCCGACCGCCCAAACACAAACATACAACCAAAGCCAAGGCGCGAGGGTCAACTCACAGTAATAAGTAGATATACACTC AACATGTGATATGGGGTATAGATATATGTTGATATATATATATATATATATAAACAATCCTAGCATGTTATTGGCTCTAA CAATGCTTCAAATAAATCAAACAGCACACAATTCCAGTCAGAGTGAATGTATGCGTGAAATGCAATCATGAATCCGGATT TGTGACGCGTTCCCGTTCGCCACAAGTGAAGCATTCCCGTTCTTCACTATGGATGAACCATTCCCGTTATTCATCCTGGA TGAACCATTCCCGTTATTCATCCTTGGTGAACCATTCCCGTTATTCACCATATGATGAACCATTCCCGTTATTCATCATT TATGCAAGGTGAACCATTCCCGTTATTCACCATGAAATGCACAGGTGAACCATTCCCGTTATTCACCCGATTGATGCAAT ATGGTTAGCCAAACATCGAATCGTCCTCACCACATAAGTGTTTAGCTCACAACCCAATCTCAACAAACCCATGAGTTAGT GTCGGTCAATACAACACAACTCGGAGTAAGTGTCGGTCAATACAACACAACTCCATCAACAAGAATACACAAGGGTCTAG TGTCGGTCAATACAACACAGCCCAAACAACAAGAGCACTAAGTGTCGGTCAATACAACACGGCTCCAACAACAAGATAAC CCAAGGGATTAGTGTCGGTCAATACAACACAACCCCAACAACAAAACCCAAAATCAAAGCCAGAGTCAGTGTCGGTCAAT ACAACACGACTCGGAGTTAGTGTCGGTCAATACAACACAACTCCCACCACAAAACCCACAATCAAAGCCCAGAGCCTGTG CCGGTCAATACAACACGACTCGAACAACACTCCCAAGAGTACTAGAGTACTCGGTGACTTTCAGTCATCACCATAGCTCA CCTCAGTGGCTTTCCCGATTCCAATAACTCTCCAAACCCACAACAAAGTCGACTTTTCCCCGTCTTTCGTAAATATTTTC CCCTTCAGTTCTCCTATGCTTAAACGTTAATAAAAATTGTTTCAATTCGAATTAGTCAAGTTATGAGTTTATTTCTCAAA GTCTAAGTTTCCCAAGTCTTTAGTTTTTCAAAGCTCTATCATTCTAAGT
CDS sequence (LotjaGi4g1v0170200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATTGAGTAACAATGTAATAGGAGCCATTAACTTCATTGCTGTGCTCCTATCAATCCCAATCATTGGTGCTGGGAT CTGGCTAACAACCGAGCCAGCCGATTCATGCGTCAAAATCCTACAATGGCCCGTCATCGTTCTAGGGGTTTTGGTCTTTG TGGTGGCTCTGGCCGGGTTCATCGGAGCCTTTTGGAGAATCCCCTCGCTTCTCGTGTTCTACCTTGTTTCCATGTTTGTG CTCATTGTGTTGCTCGTTTCATTGGTGATTTTTGTCTATGCGGTCACGCTTAGAGGCCATGGAGATATTGAACCCAATCG GTCATACTTGGAATATCAGATGGATGATTTCTCTATTTGGCTTCGTCGAAGGGTGAGAAGCTCGAACAAGTGGGATCACA TTAGAAGCTGTATTAGCTCCTCAAACACGTGTGCTGAGTTGAACCAACGTTATCGACTTGCTCAGGACTTCTTTGATGCA CACTTATCTCCCATGCAGTCAGGGTGCTGTAAGCCACCAACCAAATGTGGCTACACATTTGTGAACCCAACCTATTGGAT TAGCCCAATTGACAACGCTGCAGACAAGGATTGCATGCAATGGAGCAACGAACCAACAAAACTTTGCTATAACTGCGACT CATGCAAGGCTGGTTTATTGGCAACCCTTAGAACCGAGTGGAGGAGAGCTAATGTCATATTGATCGTTGCCGTGGTGGCT TTAATTGTAGTGTATCTGATGGGGTGGTTTGCCTTTAGAAATGCCAAAACTGAGGAGCTCTTTCGCAAATACAAGCAAGG CTACACTTAA
Protein sequence (LotjaGi4g1v0170200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALSNNVIGAINFIAVLLSIPIIGAGIWLTTEPADSCVKILQWPVIVLGVLVFVVALAGFIGAFWRIPSLLVFYLVSMFV LIVLLVSLVIFVYAVTLRGHGDIEPNRSYLEYQMDDFSIWLRRRVRSSNKWDHIRSCISSSNTCAELNQRYRLAQDFFDA HLSPMQSGCCKPPTKCGYTFVNPTYWISPIDNAADKDCMQWSNEPTKLCYNCDSCKAGLLATLRTEWRRANVILIVAVVA LIVVYLMGWFAFRNAKTEELFRKYKQGYT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 269 | 269 | 1.2E-150 | – | |
| PANTHER | 1 | 269 | 269 | 1.2E-150 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PRINTS | 6 | 29 | 24 | 5.4E-6 | ||
| Phobius | 6 | 29 | 24 | - | – | |
| Pfam | 7 | 245 | 239 | 1.6E-27 | ||
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 30 | 40 | 11 | - | – | |
| PRINTS | 38 | 64 | 27 | 5.4E-6 | ||
| Phobius | 41 | 65 | 25 | - | – | |
| TMHMM | 42 | 64 | 23 | - | – | |
| PRINTS | 65 | 93 | 29 | 5.4E-6 | ||
| Phobius | 66 | 70 | 5 | - | – | |
| Phobius | 71 | 97 | 27 | - | – | |
| TMHMM | 71 | 93 | 23 | - | – | |
| Phobius | 98 | 231 | 134 | - | – | |
| TMHMM | 230 | 252 | 23 | - | – | |
| Phobius | 232 | 252 | 21 | - | – | |
| Phobius | 253 | 269 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0170200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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