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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0178000 |
Transcript ID | LotjaGi4g1v0178000.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Mitogen-activated protein kinase; TAIR: AT1G10210.1 mitogen-activated protein kinase 1; Swiss-Prot: sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NTF3; TrEMBL-Plants: tr|I3SBX5|I3SBX5_LOTJA Mitogen-activated protein kinase; Found in the gene: LotjaGi4g1v0178000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:36367085..36369533) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATTGAGAGCTGCGCATGGTCCTGATTATGCAGAAGCAAGTGCTATCATGTTGGGTCTTGAAGTGGCTTTGAAATG TGGCTATTTTTCTGTGAGATTGGAATCAGATTGTCTTAGGGTTGTGCAATCCATATTGCAGAAACGGTCCAATAGTTCTT ACCTTGGTGTACTGTTGAAACAGATTATTAACTTAGGTAGTCAGTTTGGTGTTTTTAATATTTGTCATATAGGTAGAAAT GCTAATAGGGTGGCACATGAATTGTCTAAGTTTTCTTTAGCTCATGATGATAATGAGTGGATTGGTGTCACTCCCTTTTG TATTCAACAGTATGTACTCATGGACATTATGTCCTTTTCTAATTAATGAATATTAAGTTCCCTGTCAAAAAAAAAACTTG TGCTTAATGTTGCTACAAATTTGGAACTAGGATTTTAATTTTACTATTTGCAAATATGATGCTCTGCCTTAGAATATGAT GAAATACTAACTTTTTTAATCAATTGTGTGCTCTTCTGTGAATAGAGAAACAAATGAGAAAGTTGCCATCAAGAAGATAC AGAATGCCTTTGAGAATCGTGTTGATGCGTTGAGAACTTTGCGTGAACTGCAGCTTCTTCGCCATCTTCATCATGATAAT GTGATTGCTTTGAAAGACATCATGATGCCTGTTCATAGGAGTAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGA CACGGATTTGCATCAGATCATTAAGTCTTCTCAATCACTGTCGAATGATCACTGTCAATATTTCCTCTTTCAGGTACGAG TCTCTGACACTATTGCTATCATAATAGAGAATTATCGGTTTGCTATCATGAACAAAGTGGTATTTTACATTTTTACCATG TATGCAAGTTATAGCGTGTTTGTACCAGCTTCTCTTTTATCCAAATCAATTCTGAAATCCAGAAGCTACTTATTGAAGCT TATCTCCAGAATTGATTTTGTATTCATAAATCATAACTGATTGTAGAAAGGTTCCAAGCATGCCCTTGATAGCCTAGAGT TTACACTAGGCAGAAAAACACTTATGCAACTCATTTATTAGTTTGTGATAGTCTTGCAGAGGGGCTTTGGTAAAATCGTA CTCAATATGGGAAGATCTTTTATGCTTACAAAATTGTGTGTTTTCTTGTTACATTATGCATTTTACCCTGCTGCTTTCTA ACCCCTCCCCCTCGATTTTCTGAACTGACTGTTCTTTCCTGAAGAACTTACATTACATCAGTCATGCCATGGAATATTTG CAGGGCTTTCTGGAATTGTAAATTAAAATGATTTGTGTTTCTTAGCTTATTGCATTTAGCAATTGAAAGTTCTTGGTTGC AGCTGCTTAGGGGCTTGAAATACCTCCACTCAGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATTAAT GCAAATTGCGACCTTAAAATATGTGATTTTGGGTTAGCACGCATTAACTGCAGCAAGAACCAGTTCATGACTGAGTATGT TGTCACTCGATGGTATAGGGCGCCAGAGCTTCTACTCTGCTGCGACAACTATGGGACGTCTATTGATGTGTGGTCAGTGG GATGCATATTTGCAGAGCTTCTTGGGCGAAAACCTATTTTCCCTGGTTCAGAGTGTCTTAACCAGCTAAAATTGATTATC AATATCCTTGGTAGTCAAAGGGAAGAGGATATTGAATTTATTGATAATCCAAAGGCAAAGGAGTATATCAAGTCAATTTC ATATTCTATTGGAGCCCCCTTCTCCCGACTTTACCCGAATGCGCATCCATTGGCAATTGATCTACTTGCAAAGATGCTTG TTTTTGATCCCACAAAGAGGATTAGTGTCGCCGAAGCACTTCAACACCATTACATGGCCCCTCTCTATGATCCTAATAGT GACCCTCCAGCCATGATTCCTGTTGATCTTGACGTCGATGAGGATCTAGGGGAAAAGATGATAAGGGAGATGATGTGGAA GGAAATGCTTCATTACCATCCTGAATCTGCCATAGAAAATGCCGAGTTGTGCTCATAATCTTATTTTCTACGTTTTTTTG GGGTTATGCTCCCTTTTGTTGGTGCCTATAGAGTCTAATATAATAGCTTGCTTCAAATAACTAGGAGGGATTTGTCATCA GATACCTCAATATATTCTCTGTTTCCTCTTTGTTGAGAGCAGAGAAAACAGCAAAATGATGGTCATCTTGAAAAGTCATG CACAACTATGTTTTGCTGATGATGCATGATAGTTTTTAACCACCATGCTGAGAGACTGACTTTGAGCTTTATATTGTAGT TTCCTCGTTCGAGTTGTACATAAACATGTTCTTGTGTCTGTAATAAACCATTTTGTAAATTAAGTCGTGTTTATCAGTAA TGTATTATCCTCTGTACTACAACAAGCTTTTTTGTTTTCTTTATTATTA
CDS sequence (LotjaGi4g1v0178000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCCTGTTCATAGGAGTAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCATCAGATCAT TAAGTCTTCTCAATCACTGTCGAATGATCACTGTCAATATTTCCTCTTTCAGCTGCTTAGGGGCTTGAAATACCTCCACT CAGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATTAATGCAAATTGCGACCTTAAAATATGTGATTTT GGGTTAGCACGCATTAACTGCAGCAAGAACCAGTTCATGACTGAGTATGTTGTCACTCGATGGTATAGGGCGCCAGAGCT TCTACTCTGCTGCGACAACTATGGGACGTCTATTGATGTGTGGTCAGTGGGATGCATATTTGCAGAGCTTCTTGGGCGAA AACCTATTTTCCCTGGTTCAGAGTGTCTTAACCAGCTAAAATTGATTATCAATATCCTTGGTAGTCAAAGGGAAGAGGAT ATTGAATTTATTGATAATCCAAAGGCAAAGGAGTATATCAAGTCAATTTCATATTCTATTGGAGCCCCCTTCTCCCGACT TTACCCGAATGCGCATCCATTGGCAATTGATCTACTTGCAAAGATGCTTGTTTTTGATCCCACAAAGAGGATTAGTGTCG CCGAAGCACTTCAACACCATTACATGGCCCCTCTCTATGATCCTAATAGTGACCCTCCAGCCATGATTCCTGTTGATCTT GACGTCGATGAGGATCTAGGGGAAAAGATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAATCTGC CATAGAAAATGCCGAGTTGTGCTCATAA
Protein sequence (LotjaGi4g1v0178000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMPVHRSSFKDVYLVYELMDTDLHQIIKSSQSLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDF GLARINCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREED IEFIDNPKAKEYIKSISYSIGAPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVAEALQHHYMAPLYDPNSDPPAMIPVDL DVDEDLGEKMIREMMWKEMLHYHPESAIENAELCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 270 | 270 | 1.6E-167 | – | |
PANTHER | 1 | 270 | 270 | 1.6E-167 | – | |
Gene3D | 1 | 265 | 265 | 4.9E-125 | – | |
ProSiteProfiles | 1 | 222 | 222 | 34.789 | ||
SMART | 4 | 222 | 219 | 4.7E-49 | ||
Pfam | 9 | 222 | 214 | 6.3E-53 | ||
SUPERFAMILY | 9 | 229 | 221 | 2.7E-75 | ||
Gene3D | 19 | 248 | 230 | 4.9E-125 | – | |
ProSitePatterns | 57 | 69 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0178000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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