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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0178500 |
| Transcript ID | LotjaGi4g1v0178500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | p-loop containing nucleoside triphosphate hydrolases superfamily protein, putative; TAIR: AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|B6SFA4|MAA3_ARATH Probable helicase MAGATAMA 3; TrEMBL-Plants: tr|I3S0V2|I3S0V2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0178500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:36467913..36477664) extracted from Lotus japonicus Gifu genome v1.2.
ACGGTATATTCAATTAGGGACATTTATGAATCTTTGTTCAACACATTGACCGTCAATTCATAGATCTCCCCTTTCTGTTT CCATGACGAACAGTGAGCTGAAGCTTATTGGTAAATGGTCGAGTCCGTACGTGATTAGGGTGAAGATTGCCCTCAGAATC AAATCCCTTGAATATGAAAACCTTGAAGAGCACGAAACGTTCTCCCCCAAAAGCAACCTTCTTCTTCAATCCAACCCTGT TTATGCCAAAGTGTTCTCATCCACCATGGCAAACCAATCTGTGAGTCCATGCTCATAATTGAGTACATAGATGAAACTTG GTCTACTGGCCCTTCTATTCTCCCCTCCGATGCTTATGATCGAGCAGTTGCTAGGTTCTGGGTTGCTTACATACACGATA AGGTAACTTTTTTTTCTTCTTCTTTTCTTTGTATTTAGCCATAATTTATTTTACTTAATTTAGAATTAAATTTTAATTGA GTTTAATGATATGCATGTTACGTGGACATTCAATCACATTATTATGCCATGAACAATTACATTCATTTTTAATTTTAATT TAATGAAAAACATAGTTTCTGATTTGGCGGAAATCAATTGAATGTTTATGGGTAAACAAACGGTGCACAACCCTTGAATT TGATTTATGTTTGAGTACCTTTATGGAAAAGTTGAGTTTTGTATGGTATGTTATGAAATGCACTTGTCAAATATTAGAAT TGATTATGTTTTAACGCATAAACAACTATTTGTTCCGGCAAGTAGACTTGATTTTGTAGAATTGATTCAAATTTACTGGT ACACCCGTAGAATTGACTTTCACCTAGTAGAATTGGTTCTAAAGACTTGATTTTGCTTTTGAAACATGTTCTAGTGGTTT CCTACGATAGAAACCATTGTAACCGTTGATGAGGAAGAAAGGAAGCCATACTATGATATATTGGATGTAGTGCTTGAAAA TATGGAGGATGCTTTCGTCAAATGCTGTAAAGAAAAGGCCTTTTTCGGTGGAGATAAAATTGGGTACCTTGATATTGCTT TTGGGAGCTTCCTGGGGTGGCTCAATGCCATAGAACAAGAGTATGAAAGGAAAGTTCCAGCTTTGGTTAAATGCGTTGAA AGGTTTGTTGCTGACCCTGCTGTCAAGGGGATTATACCTGAGACTGATAGAGTCGTTAAGCTTTCTAGGGCTTTTCGGAT CAAATGGAGAGCTGAACTTGGTAAGAAATATAGTTATGAGTGCAAGTGATCGATCTTGTTGTATCATGAATAAGGTGAAA AGATAAAAGTGATCCTCGTGTGGTATGTGTTTGTTTCCCTTCCAGTTGCCCTTAATTTTCTTCTCTTCTCTCTTTTGTTC CTTTGGTCTGTACTCTCACTAGTGTTTTTACCCGTGCGATGTGTAAGACCCCGTTTTAGGGCATATTATTTTAATAATAA TATTAAATAATATTCTGGGAATTGTTTGTGTTATATGTGATATGATGCCTTATTAATGACAATTATTTTATTAGGGACAT TATTAGACCTTAACAATATCTAGATGACGATGTACTCGTCACTACGGTCGTTTTGACTGTAATATTGCTAGAGTTATTTT CCGACGACATTTAGGTCAAAATCGGCCCGACATCGGCGATGAGTTGGCGAATCGAGTCGACGAGAACGATTTCGCGGGCC ACACCTCATGAGGAGGTGCTGGATATATTTCTAAAATATTCCATGAGGGAATATTCATTTCTTCTATTTTTTAGAGTTTT ATTTAAATAAAAATGGGTTTTTATTTAAATAAAATGTATTTAATTATTTTAAAACCTATGATTTATTAAATAAACATTTT CAAAATTATTTTCTGGAGCATTTATGAGGGCTGGTCTAATATTTGGAGGGAGGAAGGAGAAAATGGTTTTTGAATTTCAA ATTGGGGTTTTTATGGTGCATTAAGAAGAGATTTTTTTGTGATTAATGCACCTAATCACCTAAAAACAACCTTGTTTTGT GTTTGATGGTTTTCTTGTGTGAAAATCTGATCATAGTAGTATGTGGTGGGCGGCCAAGCTTGGAGAAGGAGGAGGGAAGG TGGTTTTCTTTCTTTTCCACTTAATGGCTAGTCTTTATGAAGGAGCAAATCAAGGGAGAAGAAGGAGATTCGTGAGAGAG CAAGGCAAGGGAGGAGAGTTGATCATCTTCTTCAACGATTCATCTTTTCCTTCAACTCTCTAGGAAAAGGTGAGGGCTTT TCCAATCTTGGGTAGAGTCTAGGCCTTTGTGAAGCATGTTTGGCTTGTATGCATGAAAAACTTGCTTGTGATGATGCTTG GTTGCTTCTGAAATTTGTGAAACGCTTATATGATGAATTGAGTCTCTCTTTGGAACATGTTTTAAGGTTATACTTCTGTT TTATTCTCCCTAATTGAGTGATGCCATGATTTATGAGAATTATTAGACCAAAACCTTGCTAAACTTGTCATATATGTGTG GATCTAAGTTGATAATCAATAACATGTGTTAGAATGAGTTGTATGATGATGCTTATGCATGAAAAGCTTGCTGGTTTTTG TATGTGATGCATGATTAAGCATGATAACAAGTTTTGGAAAACCCTACACCTATACATGGTACGGCCGAACCCTATTTCCT AGGGTTTAGGCGACTTTTCCTTATCTTCTTGACTAATTGTTGAAACTTGGTAAGTTACTGATTATTACTATTTGATATGT GAAAAAGCATGATTAATTGATGTATTATGGATGCTTGGCCGAAACCCAAGTGCTCTCTAGGGTTTAGGCATTGACTTGTC TACATGTTGAGAGTTTGCTTGAATATTTTCTATCTTTGTGAGGAATGGGACAAAACCCTAAACCTCTTGATGATTTTTTT CGGTACATACCTCTTGGTGATTAAATGTACATCCCGTACAAAAAAGAACTTTAATTATATGAAAATGAATTTTTACTAAC GAATTAATTAAAATAATTATCTAAAAACTCAAGAGTCAATTACTATGCACTAACAACGCAAAAAAGATTACATAATTAAA TTTGATTTTTTAAATATTTTATAATATTCATGAAAACGTTTTCTTTTTTGAAAAGTGAAATATGATATTAATAAAGAACT CTTGGGGACAAAGTTCCCCCCAGTGAACTGATAAAAAACTACAACTAAGAAAGGGAAACAGTAATTTGAAAAAAAGGAAA AAGCTACATAAGAGAAAGCACTAAAAATAACAGTGAACAACACCATGTGTGGGCAGCAACAACCAAAGTAAGTTCAAACA AAGCATCATACAGCAAGAAACTTTGTCTGTCAGCAAAAGGAAACAACATCATGTAGACTTATATTTCTAAACCTCGTATA ATATAAGGTAGGGCACAATGTTTGAAGTAGAGACTTAGGCACAATGTTTTCATATAGCCAAGACAATCTCCAAACATAGA GCTCTTAATCATAAGGGAGGAATTCAAATAGGTCAAGCAACTCTTTCATAGTAGTAAGCGCACTTCATTCTCGGATTTCT TGTGAAGCATACTATGTGGAAAATACATTCATTCAAGTTTGGTCAAGCGTGGTCAAGCCACTTCCTTCTTTATAGAATCA TGTCCAGTTCATCTTTCTAGTGAAACCATATGCTTAAACATCACTCCATTCTGCATTAGGATTCCACACAACAACACATT TTAATAAGGTATGGAATGGATGACAAATTTCTCTTAAAGGAATTAGATGAACAAAAAATGAAAGTATAGTTAAACACATA CCCTTTACACTGTCTACTAAATACATGCTCCAATCTTCTTCCCCTTCAAGATCCTTTTCACCACCTAAATATGGAAGAAT ATAAGAATGAAGTTGAGTGGCTGGGAAATAGAGAACTAAATCAACGTACTTCAGTTTTCTCAATTATTTACATTGATCCA TTGCAAACTTAAGTATTCTCAATTATTTACATTGATCCATTGAAGAATGAATTTCCATTATTTCACAGTCCTAGAATGAA GCAAAAAATGTGATATTGAAGAAGGAAGTGAGAATGGGGTAAAAAAAAAGAGTTCATTGAGAAAACACAAATCAAGTTGG TCTTTGAGTTATTAACACCTCCATTTAACCACACCTTTTTTATACATATGGAACCACACCTTGTATATACATATGGAAGC TTCTAATATAGTAGGGATATGCAGACATGGCCATCCTCATCACCTGCTCGCAGCCATAGTTGAAATATTATTCCATTGGA CAATTAGATCCCGCCATCCCCTCTTTATGTTCTCTACCACAGAGAAGTTCCAATACCTGCATAATCAATAGTAACCTCAA TTACACAATTGTAAAAAACATGCCCGGAATTACATCAAAAAAACTTGAAGGAAAAGGAACCCAAAGTAAGCAAGAAGACT TGTGAAGCAATCCTACACACCATGTATTTATGAAATACACTTATCTATTCAGCTAGGAAATACACTTATCTATCAGCTAG TTAGTAGAATACATTGGCGTCCTATGCCAATGTACTATACATGAAGAACAAAAGAATGTAATTTCAAGAAGGAAAAGAAT GCATCAGAATGGGAGTGAGAAACACATTAAAAAATTAGGAGCAATACAAAACATCAACAATTGGTTCATTGCAATTCCCC AAATTACTCGAACTAAGAAAGGTTCTTTCCGTTCCTCTGCTGATTGCTTATTCTCTGCAACAATAGCCGCAACATTCACT TCCTGTTGCACCCGAACGACCGAAAATGATGAAGAAATAAAATTGAAAAATTAGAAAAGATAAAAATGATGAAGAATGTA GCAATCAAAATTCAAAATGAAAGAAGAAGATAAAGTTAAAAATGATATATTGGTGAGGAGAGTTCCGAAAGAGAAGAACA AAGGAGAAAAGGAAGAGATCGAGAGATTCGAATAGAGCCTACCCAAACAGAGGCAAAACGCCCATTTAATTAGAACCTTG TCAAACCTCCTTAGCATAGCCTGGGAAATACAAATAATATGATTTAGATCAAAGAAAGGATATCAATCTATGAAAGTAAA GATTTTTTTTTAAGAAAGAATAGTAAAACTTGATTTCAATACTTAAAAAATCAGAAGAAGCATATAACTTTCATACCTAT GTATTAATGTATTAAACATGTAAACAATCTGATCACATGTTGAGTTCAGATAACAGATGAACCAAAACAATTTTGCAGTT AAATGAGCCACAACCCAGCATATAATTATCAATTTATGCTGCATGACAAAATAAATTAAGCATGATTGAAAAACACAGAA CATAAAGTGTTGGCTCAGAAGCTAATTTGAGTTACCATCACATGATTATATCAGATCAAGTGTGTTCAGAAGCTAATTTC AAGCTATGAATCAGCAAAGACAAAGAGATATTTTTTCTTCCTATTCTTAGAGAGCCACGCCCAACCCCCTTTGTTCAGCC TCCACCAACAAATCCCCCATGGAATGAAACCACAATCTGAGAGGAAATAAAAAATTGATCTGGGAAGTAAAAGGGAAAAT TACCTTGTGCGCAATCTGAGAGAAAGGTCATGAATGAGCAAACACCATCAACTCCAGAGGGTTTTTGGAAGCTCCAATTT CAGAATCTTGTGCGCCATTCCATTCAAATCAGACTCCAATTTCTCCAACTCTGAGTCGGAATCCACGACAGCGGGTTCCG TTGGAGGAGGAGGAGGGTTTCTAGCCGAGGGACCTTTGGGATCGGAGCTCGTAAAGGGCGCGAGAGCAGGAGAGGGACGG TGAACGCAACAGGGAGGGAGAGGAGTAGAATTCGAGCGATTGTGGCTCGGAGGATGAAACTGCGACGACCGCGGCTATGG GGGTGTCGTATAGGCGGGGGGAACGCCAGCGGCGAGGTATAAGTAGTGGCTCTCGAGGAAGAAGACGACTTCTGGTTATG GGATACTATAGAGCGGAGGAGGAGTGAGCTATGGCCAGATGTGCTTGGAAAATGAAGATAGAAGAAATAGGGAAAGAGAT GAAGAGGAATAAGAAGACGGTGTGAGGTGAAAGGATGATATTGTGGAGGGTGACTGAATTTGGAATTTGAGCAGAATTTG AAAAATAATATGTTGTGGAGCACTAGTGGGTGAACCGAGGAGGTGAGTGGAAACAGGAGGTGAATGAATAAAGAGAACTT GGAAACAGAAAAGAAAATTCAAAATTTATGTTCTCTTCTGAAGGCTAGGGTGAACCACCTACCTAGGTGGTGCAACTTGC ACCAACTTGCACCAGCTTTTTAGGCCACAGAAAATTAGGAAAAATAATTAAAAACTCAAAAATAAATGAATGGTTGTAAA TAATCTAGGATAAGTTACCATTATATCCCTTCCCATATTACCATTATATCCCTTTCTCATATTACCATTATATCCCTCTG TATTTTTTATCTTTTGGATTATTACCCTTATACCCCTCCTCCATTATCCCCCTCCTCCACCTCATTCCCCACCTCATCCC TTCTGCAACTCATTTTTCTTCATCTGAGCAACTCCTGTGTCCTCCTTCTGAAACTCTGCAACTCCGATTCCTCTCCGCCG TCTTCTGTCGTCCCTACGGCCTCCACCCGTCGTTGGCTCTAAATCTGGTTAGTTGCTCCTTTTTCGATTTGCATCAAACC CTAGCCATCTCCATCCTCTCTTCCATAGCCGTCGAACTCACCACCTCCATTTCTTCTCCAAACTACCGTCGAACTCACCA CTCCTCTCCTCTGTTCAAAATCGCATCACCATCCTCTTCCCAACTCCATAACCACATCACTTTCCTCAACCAATTCCAGA ACCGTTCCTTCGAACTCCACCGCACCACCACGTCCTCCTCATTTTTAATCCTGTTGCTAATAGTTCCATTGTCCTCTCTC TCGAACTTCCGGCGTGTAGGACCACCACTGCACGATCGCTGGCGTAGATCTGAGGCGGTTCTGGCGCTGCTCCGACGCGG TCCTGATGTTGCTTCGAGGCTGCTCCGTCACGGCACGAAGAGGCTGAAGCAGCGAGGTGAATGGGACGCCCTCTGAGGCA GTTTGGAGTCTTCAACTCTGGAAAATTGGAAAAAAGGCTTGTGTTGCTGAAGTGCCATTCTTCTGAACCTGGATTTTCTC CTTTCTCATATATTTGGTGCTCTCTTTTCTTTCCTCATGTGTTCCATTAACTTATTTTGAATATACCTGCTTGATTCTTT TGATTATTACATAATACCAGGAACTTCCATTTTGTGATTTAATTGGTTTCTGGATGTCTCTTTCATAGTAGGCTTGTGTA TATCCACTTACCAACATATATCATTGCACTTGAAACGGTGAAGGTAATGTTTAGAGTTCTGGATTTGTTAAGGTCTCTTG AAATTTCCTTGAGTCAAGTTCAATTCAATCAAAATGACGATGATAGTGATGAAGAAAGCATTCTGGTTTCCCTGGGATGG TCAAGCTTCAAAAGAAATGAGTGCCTTAGCCTACTAAATTCACTTTCTGAGTCAATTTCCCTTCCTGAGTATTCTTGGAG AGGCGATGTAGAAAATTTTTGCTTGTCCATTGCATGCATAATTTTATGCACTACATCAAGCTCTGTTAAACTATACACAG AACGGATGAGATCAGTGCAATTTCTAGTAGTTGATGAAGCAGCTCAATTAAAGGAATGTGAATCGACCATTCCATTGCAG CTTCCAGGTCTCCACCATTGCATCCTAATAGGTGATGAGAAACAGCTTCCAGCATTGGTTAAAAGCAGGGTACTTAACTT AAGCATTGCTTTTTTTGTAATTTTAATTATAGATTCCCTGCCATCATGAAAGATTGCTATCTAACATGCTTAAAATCATT AAATTTTTAGACTGCAGATAATGCTGAATTTGGAAGAAGTTTGTTTGAGAGGTTGGTGCTCTTAGGTTACAAGAAGCATA TGCTTAATGTTCAGTATCGGGTGCATCCATCCATTAGCTTATTCCCATGCAAAGAGTTTTATGATGAAAAACTTACTGAT GCCCCCACTGTCAAGGGAGAAAGCTATAATAGAAGTTTCCTTGAAGGTGAAATGTTTGGTTCTTATTCTTTTATCCATAT AGCAAAGGGGAAAGAACAGTTTGGTCGTGAGCACAGTTTGAAGAACCAGGTTGAAGCTGCAGTTATTTCTGAGATAATTG GAAGCCATAAAAAATGTTAGTTTTATATATGTGCTGTAACTTTATAAGAAATCTTCAGCTTCAATAATGCATGGATATGA GTAACATTGTTCTATTTTGTTTTGCCAGAGTTTATGAGGACTAGGAAGAAAATTAGCATTGGAATTATATCTCCCTATAA TTCTCAAGTTTATGAAATCCAACAGAAAATTAAGCACCACATTTCAGTTTCTGATCCTGACTTCTCTGTCAGTGTTCGTT CGGTTGATGGATTTAAAGGAGGGGAACAGGATGTTATAATAATTTCTACTGTGAGATCTAATCCTAGTGGAAAAGTGGGG TTTCTTTCCAATAGACAAAGAGCAAATGTTGCTATGACTAGGGCTAGGTATGTGATATTTGATGTTTATGTGGTTTTGTT ATGCTGCAACTTCCAAGTTGATTGAAAAATGGGTTTATGCTTGTGCAGATATAGCCTTTGGATATTAGGAAATGCGGCAA CACTGGTTAGCAGTGACACAGTGTGGAAGCAGGTAGTTCTTGATGCTAAGAAAAGAGATTGTTTCCATACAGCCGATAAG GACAATAAACTGGCTCGGGTTATTGAGGATGTTGTTTTTGAGCTTCAACTACTTGAAGAATCTGAGTCGATGTTTAAGAA ACTGAATCTAGGGGAGAGGTCTTCCAGGTATGTCGAACCATAATACAATAACAATGCACACACACACACACACACACACA TATATATATATATATATGTGTGTGTTTTGAAGAGTGTACTTAAAAAGGTGATGATAGCATTTCTGTTTGTTAGTTTGCTG TATAAATGAACTTTATAATTGTAACCTACCGGATCTTCAAACATGCACTAATCTGTGGTATTTGTTTTTTACAGGCCTCG GAAAGCAAGGAGGTGATAATGTGAGTCTCTCTCTGGTGAACTTAAAGTGAAGAGGTGTTAAGACCACTATGGACATGGAA TCCTGAGGAGCATTTTTAGATTTTCAATCTTTGCGCAATGAACTGAAAGTTGTGATAGCATTTTGCAATGTAGTAAACTT AATTCCCCTTTCAAGGTTTTTGTTTTAAAAAAAATTGAACACTCTATATCTCTTTATTAGAGAGAGAGAGTGTTTCTCCA AACTCGCAAAAACTTAAAGCATCTAAAATGACGCCTAAAATGGTCAAGTGGGTTAGGCTTTTTTTTGTCAAAGTGGAATG CCACACGATAAAAACCGCTAATCTAATTGGGTCCAGACGGTAAGCCCAATTTCTCCATCTCGTATCGTGTCGGTCGGAAT ACAATCTCAAAACAACATCAATGGCCCAGGCCCAAACCTAAAACTCGTGAGGCCCATGTAGAAGCCCAAAACAAGATACA AAAAAGAAATATTGAAAATAAGAAAAATGCCAAGACCCCATTTGGAAACACACCTTAATTAAGCGCTTATGGTCATAAAA ACTTATGACATAAGCGCTTACTCATAAGTTATTTTAAAATATTTATTGAAATAAATCGAATATAAGCTATATATAAGCTT AAGCTCTTTTTCATAAGCTATCCTGAATAGCTTATGAAAATAAGCTCAAACAGCTTATGGTAGGCCATAAGC
CDS sequence (LotjaGi4g1v0178500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGACTAGGAAGAAAATTAGCATTGGAATTATATCTCCCTATAATTCTCAAGTTTATGAAATCCAACAGAAAATTAA GCACCACATTTCAGTTTCTGATCCTGACTTCTCTGTCAGTGTTCGTTCGGTTGATGGATTTAAAGGAGGGGAACAGGATG TTATAATAATTTCTACTGTGAGATCTAATCCTAGTGGAAAAGTGGGGTTTCTTTCCAATAGACAAAGAGCAAATGTTGCT ATGACTAGGGCTAGATATAGCCTTTGGATATTAGGAAATGCGGCAACACTGGTTAGCAGTGACACAGTGTGGAAGCAGGT AGTTCTTGATGCTAAGAAAAGAGATTGTTTCCATACAGCCGATAAGGACAATAAACTGGCTCGGGTTATTGAGGATGTTG TTTTTGAGCTTCAACTACTTGAAGAATCTGAGTCGATGTTTAAGAAACTGAATCTAGGGGAGAGGTCTTCCAGGCCTCGG AAAGCAAGGAGGTGA
Protein sequence (LotjaGi4g1v0178500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFKGGEQDVIIISTVRSNPSGKVGFLSNRQRANVA MTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADKDNKLARVIEDVVFELQLLEESESMFKKLNLGERSSRPR KARR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 152 | 151 | 7.0E-79 | – | |
| Gene3D | 2 | 132 | 131 | 2.1E-38 | – | |
| PANTHER | 2 | 152 | 151 | 7.0E-79 | – | |
| Pfam | 6 | 94 | 89 | 7.4E-31 | ||
| SUPERFAMILY | 8 | 138 | 131 | 9.74E-14 | ||
| CDD | 8 | 112 | 105 | 2.36121E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0178500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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