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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0207000 |
| Transcript ID | LotjaGi4g1v0207000.9 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding family protein; TAIR: AT4G22540.1 OSBP(oxysterol binding protein)-related protein 2A; Swiss-Prot: sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A; TrEMBL-Plants: tr|K7MLJ7|K7MLJ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0207000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:47959165..47966494) extracted from Lotus japonicus Gifu genome v1.2.
GGTGGGCTCTCTTCCCCACTACTAGTGCTACTCATGGGGACATGTCCAATAGTCTTCTCAGTTCTCACTCTTCTGGTAGT TGATAGTTGCAACAACTGTGTTGTTATTTTATTCTAACTTCGTCTTATGAATAGAAAATAGAAATCTCAATTGGTTAAAG TCATTACTCATTAGTATTTTACCGTTTCCCCCTTTTCTTTTGCATAGAATAAAAAAATGAAAACTAGTTAAAGTGATGAT GGGTGCTTCATCGTTGAATTGAAAGTGATCTTCTTTATCTGAACTGAATTGTTGAGCAGATCTCATCTTTTAGAGAGAGC AAATCAGACGATAGAAGGTTCTATATATTCACAGCAACCAAGACTCTCCATCTGAGAACTGATTCAAGAAAAGACCGAGT GGCGTGGATACAAGCTTTGGTGTCAACTCGTGGCTTGTATCCACTTCAACCACTCAACGATCATCTCTCTCTTGCGCCAA ATCACATATCTGTGTCAACCGAGAGGCTCAAGAAACGCTTGGTTGAAGAGGGTAGCAGTGAGAATCTTGTGAAGGAGTGT GAGCAAATCATGCTCGCTGAGTTCTCTGAATTACAAGAGCAGCTCACAGTTCTTTGTGTTGAACGGTCAAATTTGCTTGA TACAATAAGACAGTTGGAGGTAAAATTTTTAACTTGGCTTCTGTGCTTTACCCTTTGAATGCTTCTGACAATTTCCTGTA TTTGCGCTTCATTTGAGATGTTGAAAATACTAGTATTTCTTGTTAACACACAAGACGACAACTCCTCTATTTCAATTTTG GTTGATAAAAACATCTAGCTAGATTTCATAAAATTATTACTACTATAACTTTGAGTCCAAGTGATTTATTTCTGAAGTGC TTGTTTTTTTTCTTTAAAAAATGAACTTTTTAATGAGGGTGATAACTTGGATGGGTCAGTTTTCTCTACCAAGGCAGCTT GACAATAACATTCATTGGAATATAACTTGCACAATATCCTAAAAGTTTCTTTTAGGACATTCAGTGATGAGACTTATTTT ATGTAACGCTTCAGCTTTCACTGTTTTAAATTATTATGGCTTGTTTTATTTCAAACTTTTGCTTTAGCTCCCCAATAATA CTAATTTGAATAACTTCACTGTATATTTTCTTTTAGAATCTTACATGTAATTTAATGAGATGAGATCTCTTGTCATGGTT CTATCCAATGCTAAAAGTTGTATAAAATGAACTATTTTTTTCATACCCAAATAACCAAAACTATGAAAATGTTTTCAGTA CTACAATAGTATGTACTCCATCTATTTAAATACAATCACCTGGCCATATATGGTTTTTTTATTTGTTGTGTAAGAAAAAG GAGAATTATTGAACTAATTATCACACAAAGGAGTTTGAAATGAATTATTGGACATTATTGTTGTACTTCTGAGTTTGTAT ACATGGATATTTACTTGATTAAGATATTTGTGGCTGTAGCTTCATATGACGGGATAAGCTGTTAATGTATTAGTGCAACG CAAGCTAAAGTTGTATTTTTTTTTTTGATAGAAACAAGAACTTTGTCCAATTATGTATGCAGTATGCTACTACATCACAT GCTTACCAAAAAAAAAATGCTACATCACATGATATGTTTGTTTAATTTTGTCATGCATTTTGGCTGATTTATGGTAAATT TTCCGAAAGTCTTGTCACTGGTGACTTTGTTTGATAGAGTTTCCTGCCTCTTTCCCCACCCAAAGAAATATCATAAATAA TGGTACATATTGATTACCATTCCCCCCCCTCATATTTATTTTTCCTTTCTTTCCTTGATTTCAATAGTCTTTTCAGTATG CTGATTTTTGCATGTCAGCATGTGTTTAGTTTCTAGATGTGGAAGGTTCATGCCTTTGTCTATGACTTGCTAAACTAATA TTTGTTACTGATAATGAACAGGCAGCTAACATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACAAA GAATGCACTGTCAAGTCTAGGACGTGGAAAATATAGTGGTACAATGTTATTTGTCACTTATGCTTGTCATTTTAATATAT ACATATGCTATGACCTTTCTTTTTCTTATTTGATGTGATAAGCATGTGATTGTAGTTAGAATTGTTGTCTGTCTTATATG AACATGAAAATTATTGACAGCTATTTGTGAAGTCTTTCTGAATCATGGAAAGTATTTGGCTAATTCTCATTAACTGCATA GTTTGAAATCCACCTCGTATCAGTAATTTGAGTTATATTCCTCTTGCTGCTGTTTTCACAAACTTCTAAAGAACTTAATT TTTTTATTATTTTAACTAACTTTTAGCTGCAAGTATGTTTTGATTAAGTTAACATTAGTGGTAGATCCTGGCTCAGGTGA GTCAGGTGAGGAGAAATCCTAGCTCTATACTTGTTTTCTTCTGTTAATTTCTAGTTTAGTCTGTTAGTCAATGTATCAAC TTGAGGTACATAGTTAACTCAGATTTTGATTCATTTAAAAAGAAAAAATAATAATTCAAAGACGAGCTATTTTCATTGAT TTCTCCTCTTTGGATGCTGTATGATCATATGATATAGCATATTGTCTTCTAATAACTGCGGTTATATATATTTGGGTAAA TTTTTTTACAACGATCATGTCTGCAACCTTTGATATATATCTCATTCTCAGTACGTAGTATTAATTTTAACCCATAGAGT TGTCTTTCAGAATACAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGGTGGAGGAAGTGTCAGATGAAGATGA AATCTCATATTATGATTCTAGAGAAGATTTTACAGAACCTGGTTTTATTTGTGGGTCAAAAACAGCTTTGGATCAAGTGA ACACTTCTGCAGAAGTTAATACAGAATGCATTGATATGGAGAACAGTCATGTCGAAAATATGATCTCTGATTTTGGTTAC CCTCAGATAGCAAGGCGAAAAAAGCTTCCGGATCCTGTTGAGAAAGAGAAGGGCGTTAGTCTTTGGTCAATGATCAAGGA CAATGTGGGCAAAGATCTTACACGTGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCTTCCCTCCAGAAATGTTTTG AAGACTTGGAGTACTCTTATCTTCTGGATCGCGCTTATGAGTATGGAAAATCAGTAAGATCTTGCTCATGATTATGCCAT TCACTGATTCACATGTTGCTTGTGATTATGCCATTCTCTTGTCTTGCAGTGTAAACAAAACAAATTTCAAACTAGTGTTG GTATATGACTTTATTGTCCATCTGATAGTGCTGAATGAAATGTATGCATTGTCCTTCAAGGATAATGATTTTTAGCAATT TGATTGGTAATATTGGTAGATTTGTTTCTGAACTTTCTAATAATGTTAAAAGGTTTCATTTACGCTGCTACATTTTTTTT CTGAACTTTCTAATTTTCTCAAAATTATTGTTTTAATGGGAGAATGATAATTGTGTTCAGTCATGTCATTTGTTTTATGT TTGTGTGGGTTGCAGGAGTTGGACTGATTTCTGAATTTCACTTTACCGTACTTAACGGGGGAAAATGGGGAAAGATAGTT GTAATATCTCATGTTAAATTCCACTAAATTGGTTTATAAAATAAAATACACCCTTAATAGTGTAATTAGACTTTTTTGGT CCCTGGTCTTATTGCCTCATAGTTAACTGATATATTTGCTTTCTATATGGTGGTTTTTCACTTGCCTTATAGTCATAGGA GTTTCTAATAATAATCCAAGGAATTTTCATTAGTTTGGTTTTTGTTAAGTTTTTAAAGCTTTTCCTTAATTCAAGTGAAA GATGACATTTTTTAATACTATTCATGTGGTACTTTTAACTAACTGAATTTTATTTTCAGGGAAACAGTCTTCTTCGAGCA CTATACGTTGCTGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCATTGCAAACCCTTTAATCCCTTGTTGGG GGAAACTTACGAAGCTGATTTTCCTGACAAAGGAATTCGGTTCTTTTCTGAGAAGGTTAGCACTTTATGATTGAATGATG GCGAGATTTTGCTGAGATATAGGTTGTCATCCAACAGTGTATTTGACTTGAGCTAACAAATGTACTTTGATAATATGACT TTTTTTTTTTACGGACGGATAATATGACTTTTCAGTTGTAAACTTAGAAAAAAAAATAGATTTTAAAGAAACTTGTTAGC CTTTTTTTGAGAAGTGGGGTGAAAGTAACGAGAATATTGTATTAACTGGGCTTAGACGTCCAATTGTGATGTCTGAATAA GAATGGTTTTGTTATACTCAAGGTTTTAAAACACCGTCCACGAGTGATTGCAGCCGCAACAGCATGGTTTTGGAGGTTAA TCGTGACTTCAATTCTGGTCACTTTAGCTGCATTTGTTTGTAATTTTTTCATAAATTGTGTGATTGGATACCAATTGAGT GCAACATAAACGGATTTTCATTCTAACACATAATAGAGCTCCATTCACTATTGTCTTGAAGTGGACGACTGTTTGAACTG CTGCAAATGTTAGACGTAACATACCTTATATCTTGTAAACATAACCACAACTGTGATGCCATTCTTTTGGTCATTGAGTT CGTCTGCTCAAATTATTATAAGCCCAAAGATTGTTGGCCGATATATGTTTTCTCACAATAATTATACGTGAAACAGGTTA GTCACCATCCAACTGTGGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCAGACAGTAACATTCGCTCAAAG TTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGGAGAAATATTTCAATGGAG CAAGGTGAGAATCATGAATGACCCTGTTTGCATGGTCTATTATACTGCCCACTTGTTCTGATTGTTTGGTTTCTCAATTC AATCTTATATCATACATTTATTCTTATAAACTTATACTTGTTGTTTTTCCTTTAGGTTACGACTACAATTTATAATCTTA TCCTTGGCAAAATATATTGTGATCATCATGGGAATATGGATATACGGGGTAATCGCCAATATTCAATCAGACTCAAATTC AAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTAAGGTTTTTCTACTGGTATTTACTAATTAACTAACAACTTCT ACTTATCCTTTGGATCCTGGTCTGTCGTTTCTAGTTTATTCATTTGCTTGTTCATTATTTTATTTCCTAATGTGTGTCCT CACATCTTATTCATTAATGTGTCCTAATGTGTCCTATGTGTAATTAGGTGCATGGATTTATTGAAGATGCAATGGGAAAA AAGGAGGCCACATTGTTTGGCAAGTGGGATGATAGCATGTATTATGCTAGTGGTGATGTGAATGTGAAGCCAAAAGATTT CACTTCATCAGGGGCAACCTTGTTGTGGAAAAGGACTAGACCACCCCCGAACCTCACTCGGTACAATTTGACATCATTTG CCATCACGCTGAATGAGCTCACACCGGGACTAAAGGTACTATGACGTATTGAATCATGATTCGATATGCATTTTCCTTTA TCTTCTTATGCATCTCTAATTCTTTGTTATAGCCTTTTCTGATGGGTATTTGATCACGGATTAAAGGAGAAGCTTCCGCC CACGGATTCTAGGCTAAGACCTGATCAGCGGCACCTGGAGAATGGAGAATACGAGAAGGCTAATATGGAGAAACAAAGGT TGGAAAAGAGGCAAAGAATGGTATGTTTTTAAAGTTCTCTCGTGTTTTGTTCAAGAAGCACGCGTCATATCTTTTCTTTT TTCTTTCTCCTTTGCATTTGGAGTTCTTGTTTTACCTGACGGTTTCAGAAATGTTGTATGTAATAAGCTATACTGTTTCT CAGTGATTGTTGGACTTAATTGTAACAATTAAAAAAGTTTTTTTTAAAAGGAACAATTAAAAAGTTAAGGACTAATTATG CTCCAAAAATTATTGGGGTCTAAAATCACAATTGGTCAAAGCTAAGGGGACCAAAGGTGTAATTAAATTAAAAAGAAGTA GACTATTCATGAATGGATAAATATTGTGAAGAATAGGATGGAAAGAGAGTGAGATAAAATATGAATGCTTATGAAATTCA TAAAAAAAGGGGGAAATCATTTATCTTGAATTTATTTTCGGTCTGAATTCTACTATAGAGTTTCTCTAATAAGATTTTTT CCTTAAATCAACATTCTGTGTTTTTTTTTAATTTTTTTTTATTTGAGGCTCTGGATTTGTTTATTCTAAGAATATATTCA TCTATTTATAGATGGATTTTCAATATTGATACTTTGTTACACTACCTTTATAAGAAGAGAATAAAAAAAGTTAAAAGTAC TAAAGGAGATGGAAAATAATGGAGTGTATACAAATTAAAGCTCTTATGGTTTAATTGATAGCTAGAATATTTATGAAGAA AAAAAATATTCTTTTTTCCTTTGTTGTCTACACTGTCAGCAAATTGTGACAATATCCTTGAGAAACATTTTTTACCTACA TTTAGGGTATGTTTGTATTAGAGTTGGGTGGGATATGAAAGCCCTTCATCCAATCCAACTTTGTTCCTTTGAAAAACTGT ATTTTTTTTTGGAATGTGTGCTAATGTGGATTGAAAGTGTATTTAAACACATAGTAAGTATCGATCTAATTTTGTTAAAC TATTCAATTCTGGTTCATTTTATACATGTATTGTTGGCCTTTATATAGGTATAATTATTAATTAGTAACTTAGTTTTTTT AAGATATTAATTAGTAACTTAGTTTTTTTAAGATATTACCTCTTTAGCAAATACAAAATTTACTTGGTCCTAATTAATAC CTATAATTTCTTTGACATGTAGTTTGGCTCCTTATTTTTTGAGCCTACCTTATTGCATAATGGTTATTTAAATGTTTGGG AGAGCTTATCCAAATAACTTAATAGCTTATGAATAAGAGCTTATGCTTTATCTATAACATATCTTCAATTTATTTGAATA AATATTTCTAATTAACTTATGAGTGTTTACACAATAAACCTTAACTCCACAAGTTTTTAATTAAGCTGTTTTCCCGATTG CACCCTATGATGATCATGCTTTTGTTGTAGTCAAGGAAAATGCAAGAAAATGGTTGGAAGCCTAGATGGTTTCACAGAGA AGGTGAAAATGGAACGTTTCTATATCTTGGCGGGTATTGGGAAACAAGAGCTCAAGGAAGATGGGATGGATGCCCAGATA TATTTGGTGAATATCAAGAAGGCATTGTTGATCCTTCAGATGTTTCTTGA
CDS sequence (LotjaGi4g1v0207000.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAATAGTCTTCTCAGTTCTCACTCTTCTGTTGTTGAGCAGATCTCATCTTTTAGAGAGAGCAAATCAGACGATAG AAGGTTCTATATATTCACAGCAACCAAGACTCTCCATCTGAGAACTGATTCAAGAAAAGACCGAGTGGCGTGGATACAAG CTTTGGTGTCAACTCGTGGCTTGTATCCACTTCAACCACTCAACGATCATCTCTCTCTTGCGCCAAATCACATATCTGTG TCAACCGAGAGGCTCAAGAAACGCTTGGTTGAAGAGGGTAGCAGTGAGAATCTTGTGAAGGAGTGTGAGCAAATCATGCT CGCTGAGTTCTCTGAATTACAAGAGCAGCTCACAGTTCTTTGTGTTGAACGGTCAAATTTGCTTGATACAATAAGACAGT TGGAGGCAGCTAACATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGCACTGTCAAGT CTAGGACGTGGAAAATATAGTGAATACAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGGTGGAGGAAGTGTC AGATGAAGATGAAATCTCATATTATGATTCTAGAGAAGATTTTACAGAACCTGGTTTTATTTGTGGGTCAAAAACAGCTT TGGATCAAGTGAACACTTCTGCAGAAGTTAATACAGAATGCATTGATATGGAGAACAGTCATGTCGAAAATATGATCTCT GATTTTGGTTACCCTCAGATAGCAAGGCGAAAAAAGCTTCCGGATCCTGTTGAGAAAGAGAAGGGCGTTAGTCTTTGGTC AATGATCAAGGACAATGTGGGCAAAGATCTTACACGTGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCTTCCCTCC AGAAATGTTTTGAAGACTTGGAGTACTCTTATCTTCTGGATCGCGCTTATGAGTATGGAAAATCATTTTATTTTCAGGGA AACAGTCTTCTTCGAGCACTATACGTTGCTGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCATTGCAAACC CTTTAATCCCTTGTTGGGGGAAACTTACGAAGCTGATTTTCCTGACAAAGGAATTCGGTTCTTTTCTGAGAAGGTTAGTC ACCATCCAACTGTGGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCAGACAGTAACATTCGCTCAAAGTTT TGGGGAAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGGAGAAATATTTCAATGGAGCAA GGTTACGACTACAATTTATAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGGAATATGGATATACGGGGTAATC GCCAATATTCAATCAGACTCAAATTCAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTATTGAA GATGCAATGGGAAAAAAGGAGGCCACATTGTTTGGCAAGTGGGATGATAGCATGTATTATGCTAGTGGTGATGTGAATGT GAAGCCAAAAGATTTCACTTCATCAGGGGCAACCTTGTTGTGGAAAAGGACTAGACCACCCCCGAACCTCACTCGGTACA ATTTGACATCATTTGCCATCACGCTGAATGAGCTCACACCGGGACTAAAGGAGAAGCTTCCGCCCACGGATTCTAGGCTA AGACCTGATCAGCGGCACCTGGAGAATGGAGAATACGAGAAGGCTAATATGGAGAAACAAAGGTTGGAAAAGAGGCAAAG AATGTCAAGGAAAATGCAAGAAAATGGTTGGAAGCCTAGATGGTTTCACAGAGAAGGTGAAAATGGAACGTTTCTATATC TTGGCGGGTATTGGGAAACAAGAGCTCAAGGAAGATGGGATGGATGCCCAGATATATTTGGTGAATATCAAGAAGGCATT GTTGATCCTTCAGATGTTTCTTGA
Protein sequence (LotjaGi4g1v0207000.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNSLLSSHSSVVEQISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLQPLNDHLSLAPNHISV STERLKKRLVEEGSSENLVKECEQIMLAEFSELQEQLTVLCVERSNLLDTIRQLEAANIEPEASALHDSEYQLTKNALSS LGRGKYSEYSTTESSDDIEKQEVEEVSDEDEISYYDSREDFTEPGFICGSKTALDQVNTSAEVNTECIDMENSHVENMIS DFGYPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSFYFQG NSLLRALYVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGIRFFSEKVSHHPTVVACHCQGRGWKFWADSNIRSKF WGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSIRLKFKEQTILDRNPHQVHGFIE DAMGKKEATLFGKWDDSMYYASGDVNVKPKDFTSSGATLLWKRTRPPPNLTRYNLTSFAITLNELTPGLKEKLPPTDSRL RPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWKPRWFHREGENGTFLYLGGYWETRAQGRWDGCPDIFGEYQEGI VDPSDVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 60 | 60 | 7.558 | ||
| Gene3D | 5 | 60 | 56 | 1.2E-5 | ||
| PANTHER | 11 | 639 | 629 | 0.0 | – | |
| PANTHER | 11 | 639 | 629 | 0.0 | ||
| SUPERFAMILY | 12 | 62 | 51 | 9.59E-6 | – | |
| SUPERFAMILY | 259 | 639 | 381 | 1.57E-111 | ||
| Pfam | 264 | 619 | 356 | 2.2E-120 | ||
| Gene3D | 354 | 518 | 165 | 7.9E-22 | – | |
| Coils | 565 | 594 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0207000.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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