Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0207100 |
| Transcript ID | LotjaGi4g1v0207100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.1; TAIR: AT1G12110.1 nitrate transporter 1.1; Swiss-Prot: sp|Q05085|PTR7_ARATH Protein NRT1/ PTR FAMILY 6.3; TrEMBL-Plants: tr|A0A0L9TQ48|A0A0L9TQ48_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0207100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48007897..48014641) extracted from Lotus japonicus Gifu genome v1.2.
CTCAATTCTAAACTAGTACATAACATCCTTCCTATGTGTATAATATAATTTAAATACATTCACATTTGGTTACTCTATCA TCACATTTGTACCCATGTTTTCTAGTTATCTATAGATGATGATTGAAATTTGAGGTGTCTAACAAATCAATGTTCGAATA AAATTCTACAGATATATATGAAGAAAAAAGTGAAAAATAAGAGATATAGCAGTGAATGTGATTTGAAGAAATATAAAAAT GAAAAAAAAGTGTAAATGAAATGAAAGAGAAACTTAATTGCGATGTGATTAGTGAAAGAATCATCATTTCCCCCTATAAA AAGGCAATAAACCTTCAACCCCCTTTGTGCCATAAGCCCATAACCCCAACCCGTCTCAAGGTACCAATACTTCACTTCAC CACTCACATACAAATGGGCACTCTCCCTCAGACACAGGAGCAAACCATCCAAGATGCTTGGGACTATAAGGGTCGTCCAG CAGAGAGGTCCAAAACTGGTGGTTGGACTTCAGCCGCCATGATCTTAGGTCTCCTACACCATTCATTACCTTCCCTTCTT CTCTCCCACTCTCCTCTTTTTCATTATTATAACTCTATTATTACATAAATAGAAAGAAAACATGCACCGACAGTGTTATT CAGATTGGCTCTGTTTTCTCTTGTTCTCTGTGATCTATCAGGAATAGAAGGATGCGAAAGGTTAACAACACTCGGCATCG CCGTCAATTTGGTCACATACCTCACCGGTACCATGCATTTGGGCAATGCTTCCTCTGCCAATGTTGTCACCAACTTCATG GGAACCTCTTTCATGCTCTGTCTCTTCGGTGGCTTTCTAGCTGACACTTTTATCGGAAGGTTTGTGATTTTCACCTATCA AATATCACTTTTCATCAAGAGCAAGATTCAACTATGCTCTGTTTTTATTAATTACTATACTTTTCAATACCTTCTTTAAC AGATACCTCACTGCAGCCATTTTTGCAACTGTTCAAGCAACGGTAAGACTACTGAAACCTTCTTAACATTTTTATTTCGG TTTCCAAAACTAGTACCTTCATAATCATATCAGTGAAACCTGCTCTGTTATTCATCTCTTGACACAAAACAGGGGTGGTT TTATTTTTCCAGTTCTTCTTTGATTTCTTAGCTGATCTTAATAAATCTTGTATCTTTGATCTTCTGGGGGTGTTTAAACA ACAGGGTGTTACAATCTTAACGATATCAACCATAATCCCGAGCCTGCATCCTCCTCGATGCACAGTGGGCACGTCAAAAT CTTGCGAGCCTGCAAGCACCACGCAGCTAATGCTTCTCTATTTAGCTCTCTATACAATAGCTCTTGGCACCGGTGGTGTG AAATCGAGTGTCTCAGGATTTGGTTCAGACCAGTTCGATGAAACAGACGAAGGGGAGAAGAAACAGATGGTGAAGTTCTT CAACTGGTTCTTCTTCTTCATAAGCTTAGGGTCTCTTGCTGCGGTGACGATTCTGGTATACATTCAGGATCATTTAGGCA GGGATTGGGGTTATGGGATATGCGCCACGACGATTCTGGTGTTCCTTGTGGTGTTCTTGGCGGGGACGAGGAGGTACCGG TTCAAGAAACTGGCGGGGAGCCCGCTGACTCAGATTGCGGTGGTGTATGTGGCGGCTTGGAGGAAGCGGCGGTTGGAACT GCCGTCTGATCCGTCGTTGCTGTTCAACGTTGATGACATGGAGGATGAGACGCTCAGGAAGAAGAAGCAGATGTTGCCGC ATAGCAAGCAGTTCAGGTAAAAATTTCTTACCTTCTGAAACTTATTAAAATGGTAGTGACACAATCCGACATTCTTTTTT TTATATGCTTCATTATTTTTAGATAATTTTTAATCAATTTCAAGTATACTCAGGAGTTTCATACATTTGACTTAAACTTA TTATAAACTTTGATATCTTACAATTTAGTGTTTAACATTCAAATAATGGATTAGATTGAAGATTATAAACTTTTAACACC TAAATTTCATTGTGGAAAAATATGATAAGATGGATAAAGAAAGAGAACACATAGAATAACATCATTTTTTTTTTTACTTC GGAAAGTTAAATTGCACCTGCCAGGAATCGATCCCTGACCTCCCCCTACCCAACGTATATGCCCCACAACTCCTACAACT TGAGCTGTCCTACGAGTACACATAGAATAACATCATTGATACTCCTTTTGTTTTTTATATTCAGATAATTACGATTATTA AGCAAACATATAATAAGTCTAATTAATGTATTGATCTTAAAAAATTATTTACAATTTTTTATATTTACTCTTTATTATGG AATTAATATTTTGTTAGTATTTAAAAAAAAAAGCCAATAAACCAAAATTATCAAATTTATTTAGTATATGTCATGGTTTT GGGCAAATTTTCTCTTTTCACAAGTTGTCTTTCTGCAATTAATACTATGTACTTTTTCTTTCGGGGGTTTTCATTCAAGA CAAATATATAAGTATATAGTTGAAATTAAATAATACCATTGATCTCCTTTTTCTTTTACACAAAAAGGTTCTCTCTGATT CCGTAAGCAGATTCGATGATTCTTATTTGATGCATGTTTGGTGGTGCTTAAGACATGAATGTGGATGCACATTAGAAAAC AAGCTAAATAGTGAGCTTTTGGGGTAGGAGGATGTGGATTGTGGACCCATTAGGAAGCATACAAATTTCCTAACAAATTA TTGCGTCCGGTTCATTGAACTTATATTTTGTTTCTCTTTGATCTTTCTGGATTTGCCTAGTACTCTAGAGTTAATTAGCT TATGGTCATATTTATTTAATTTCCACATATTTTTTCTTTCGTCCATTTTTTATCACATAATTTATCATGCATATTTCTTA TTTTTCACTTTTCTTTTTTCACTTCTGATTTCTTTAAGTGCGAGTGAAAATTGAGTGGGATGAAAGATATTATTGGTAGC TTATAGGATAAAATAAACTAGACTAAAATCCTACTTTTGTCAATATTTGCATATTATCCACCAATTTTATTATATATAAA TATTCTTTACAATCTTTTAAGTCTAAAATATCCTTTTTTGGTCCTTCTAATATTTTATAAGTAACGATTACAAATGAGTG GAAGAATAAAACATAAGTATTTTATACTTCAAGAATTTAATTAATAAAATTTATTTTTATAATATTAAATTGATTAAAAT GGATAACTCAAAGACTAAAATATTATTTTATTCAATAAATTGTTGCAATTATTGATGGTTGATATTTCAATAACACTATT ACTATACATAAAAAGTATGTAACTAAAATTAGAATTTCAATTAACAATTGCAATGACTTATTTTAACCTTAATTACTCAC TAATTTAAGAGGAGTCAATTTCTTTTTCTTTTCTTTTTATTTAATAGAAAATTTATTTATAATTATATTAAATATTTTCC TTTTACTTAAATAGAATTTTTTTCTTTTAGTTGCTTTTTTGGTTAATGGGAGGAGGGAGGGGGTTATCTTTTAGTTGCTA TTTCTCCTACTTATACATTATTTTTCGATTAGATCAATAAAATAATAAAAAAACCATGTCTGCAAAAAAATAAGAATAAA AAAAACCATGTGATTTGATTCCAGTTTTAGGATAAGATACCTTAAAACCTTTGAATAAAAAACTTAAGAAAATGTCATTT GAATGGGCAGAAACACAAGTAGTTGAGAGTCGGAAGACTCGGAACAAGTGAGGGAATGAGGACTAGATAAGGTAAACAGT TCAATGATGGGATTGCCACCAACCTAACCGAGAGAACCTATCTTTGAGGGTGGTGGCTCACCTTGTTCAATCAATAATCA GGGGAAGTCAATTTTTTAAAAAGAAAAATCACCGATTAGGTGCTGAATTAATATCGACCTTGTATTGATTTTTCATGTAA AAATGCTATCACTAAGTCTAGCACTTTCTTTTATGTGAAGTCCACTAAAAACCTTTCAAAAAAAAAGTCCGCTAAAAATA TAAATTTCATTTTTAATTTAGTATAACATACATAAATTTTAACCAGTAGAAAATATTAAAATGAAAACATTAAACTGAGA AAGTGTTGAAAATAAAATGTTAGAAAATGTGGAGTATTAATATGAAGTCGGTCATGAAATGATAACTACTTAACTAGAGT TGTTTACGGCTCACTGGTCTGCCATGTTCCCCACGAGCTCAAAATAGATGTCTTGATTTGCAGAGTGTCATGCATGTTTC CTTTTTAAGTGGTCTATGATTGATAAATCGATGTCAAGTGTATTGGGTGTGTGTCATTTTCTGCTTTCTAAAAATCTTCC CCTCCTTTTTTGTTTTTAAAAGTTATTATTTCCTTCACTTGTGACTAGTAGATGACAGTTTATGATGTTCAAGCAATAGG ACAAAAAATCAGGTTCCATTTCTTGATGGGATGAAGGGGGGAGTAAAGTAAAGTGCCTTTTTCTTATAAGGATCTCGTGG ATTGTTAGCCATGTCTTATAGTTCCTTTTTTGTTTTGGTGCTGGTTTTTAGACATATCACGGGTGTCACCGCCTTCCATT CAATTCATTTTTCTCCTTTAACGCGGTTGGTTTCAAGTTTTGTAGACACCCACTTTCCCCAAATATGAAATGTAGACAAG AAACACAATGCACATCTCACATTACATCACATTTATTTTTGTATCTATTATTTGTCATCGCATCACATCACACCATATCT AACTTACCTTTTCCATCCTTTTTTAATAAATAATGAAAATATTAAAATTTAATAGGTCTAATTTTACATTAAAAAATAGA TAATAAATTGAGGATTATCTTCTCACTTATAAACACTTTTATAGTTATATTTTTAGCGAATGTAAATGTAGGACTTAAGA ATGTCTTTAATAACTAATCAATATAACCCATGAAAGCTCTACATTAGTCTGTTAAAACACATAGGAATTAGGATCCCATG CATATATAGATATAGAATCACGAGAGATCATGGAGAGACACAGCTAGCAATGGCATGGCTACAGATGTTCACGCCTCGTT AGTTGTCCTTCATCAAATTAGCACTTTTCTCTCTTATCTCCTTGTCTCTTTCATACAGCTACCAGCTCTGTCAAGAACAT GGTTTCGTGGTTTGTGCTACATCTACTCCCAACAATATCACCCGTGATATTCTGAATCTGATTGATCTCTTACATGATTG ATCAAACCCCTGTTTATTTTAAGAAAAGCTTCTTAAGCTTTAGTATCCGATACATGCAAATAAATACAAGATTTCTGTCA AAACTAATAAAATACACTTTTTCTAGCTAGCTAGCTACCAAAACCTTATCAAGTGAATGTTTGAATGTTTTTTATAATTG ATTTTAAATTCAATAATGTTAAGGAAACTTTGTGTGAATAGTTTATATGTGTTAAAACTGATTATGGGAAAAAAGAATGA AAATTATGCTTTTTGACATTTCAACATCAATAATAAAATGAGAAACTATCTGCTTAACTTTTTTTAATAATTGATTATAA CTTTAGAATTAACTGTAGAAATACTGAAGCATCTTCTCCCCTGATCATTGACTCCGTTGTTAGAATCAAACTGTAAATTA AATAATTACATCCAAACTTTTTCATTTTTGGGTGGTCATTGCTTTCAACAATTAACTAATTGTACATTTTGTTGAATTTT GTTGGGGCAGATTCTTGGACAAAGCAGCAATAAAGGATCCAAAAACAGACGGCGAAATCAGAGGGGAGAGGAAGTGGTAT CTATCAACCTTAACAGATGTGGAAGAAGTGAAACTGATCCAAAGAATGCTTCCCATATGGGCCACCACCATCATGTTCTG GACAGTATACGCCCAAATGACAACCTTCTCCGTCGCACAAGCCACCACCCTCGACCGCCACATTGGAAAATCATTCAAGA TCCCAGCGGCATCCCTAACCTTATTCTTCGTCGGAAGCATCCTCCTAACTGTTCCCGTCTACGACCGCATCATCGTCCCC ATCACGAAAAGACTCCTCAAGAACCCCCAAGGGCTGACCCCGTTGCAGCGCATCGGGGTCGGATTAGTTTTCTCAATCTT CGCCATGGTGGCAGCAGCATTGACCGAAATCAAGCGCCTACACGTGGCGCATGCGCATGGTTTGGTGGGACAGCCAGACT TAGTGCTTCCTATGAGCGTGTTCTGGCTGGTCCCACAATTCTTCTTTGTGGGGTCAGGAGAGGCGTTCACTTACATAGGA CAGTTGGACTTCTTCCTAAGGGAATGTCCCAAAGGGATGAAAACCATGAGCACTGGTTTGTTTCTAAGCACACTCTCGTT GGGGTTTTTCTTTAGTTCCATGTTGGTGACACTGGTGCACAAGATGACGGGGCACCGCCAGGGTTGGCTTGCGGATAACC TTAATCAAGGGAAGCTTGATGATTTCTATTGGCTCTTGGCGGTTCTGAGTGGTGTGAATTTGGTGGTGTTTTTGTTTTGT GCTAAGTGGTATGTGTACAAGGACAAAAGGCTTGCTCAGGAGGGCATAGAGTTGGAGGATCAAGACACTGCTGGCCATGC ATAGTTTTTTTCTTTCTCAGTAGTGAACTGTAACAAAATTGAATAATGTATCTTCTAGTTTTCAAATAATATTAAATAGT TTTTATGAAGAATATATTGTTACTAATTTAGTCCCGAAAAATCGATCATAAAATTTCGTTGAATTTAAGGATTTAATGTA AAAAATATAAAATGCTTGAAAAATT
CDS sequence (LotjaGi4g1v0207100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGAGAAACTTAATTGCGATGTGATTAGTGAAAGAATCATCATTTCCCCCTATAAAAAGGCAATAAACCTTCAACC CCCTTTGTGCCATAAGCCCATAACCCCAACCCGTCTCAAGGTACCAATACTTCACTTCACCACTCACATACAAATGGGCA CTCTCCCTCAGACACAGGAGCAAACCATCCAAGATGCTTGGGACTATAAGGGTCGTCCAGCAGAGAGGTCCAAAACTGGT GGTTGGACTTCAGCCGCCATGATCTTAGGAATAGAAGGATGCGAAAGGTTAACAACACTCGGCATCGCCGTCAATTTGGT CACATACCTCACCGGTACCATGCATTTGGGCAATGCTTCCTCTGCCAATGTTGTCACCAACTTCATGGGAACCTCTTTCA TGCTCTGTCTCTTCGGTGGCTTTCTAGCTGACACTTTTATCGGAAGATACCTCACTGCAGCCATTTTTGCAACTGTTCAA GCAACGGGTGTTACAATCTTAACGATATCAACCATAATCCCGAGCCTGCATCCTCCTCGATGCACAGTGGGCACGTCAAA ATCTTGCGAGCCTGCAAGCACCACGCAGCTAATGCTTCTCTATTTAGCTCTCTATACAATAGCTCTTGGCACCGGTGGTG TGAAATCGAGTGTCTCAGGATTTGGTTCAGACCAGTTCGATGAAACAGACGAAGGGGAGAAGAAACAGATGGTGAAGTTC TTCAACTGGTTCTTCTTCTTCATAAGCTTAGGGTCTCTTGCTGCGGTGACGATTCTGGTATACATTCAGGATCATTTAGG CAGGGATTGGGGTTATGGGATATGCGCCACGACGATTCTGGTGTTCCTTGTGGTGTTCTTGGCGGGGACGAGGAGGTACC GGTTCAAGAAACTGGCGGGGAGCCCGCTGACTCAGATTGCGGTGGTGTATGTGGCGGCTTGGAGGAAGCGGCGGTTGGAA CTGCCGTCTGATCCGTCGTTGCTGTTCAACGTTGATGACATGGAGGATGAGACGCTCAGGAAGAAGAAGCAGATGTTGCC GCATAGCAAGCAGTTCAGATTCTTGGACAAAGCAGCAATAAAGGATCCAAAAACAGACGGCGAAATCAGAGGGGAGAGGA AGTGGTATCTATCAACCTTAACAGATGTGGAAGAAGTGAAACTGATCCAAAGAATGCTTCCCATATGGGCCACCACCATC ATGTTCTGGACAGTATACGCCCAAATGACAACCTTCTCCGTCGCACAAGCCACCACCCTCGACCGCCACATTGGAAAATC ATTCAAGATCCCAGCGGCATCCCTAACCTTATTCTTCGTCGGAAGCATCCTCCTAACTGTTCCCGTCTACGACCGCATCA TCGTCCCCATCACGAAAAGACTCCTCAAGAACCCCCAAGGGCTGACCCCGTTGCAGCGCATCGGGGTCGGATTAGTTTTC TCAATCTTCGCCATGGTGGCAGCAGCATTGACCGAAATCAAGCGCCTACACGTGGCGCATGCGCATGGTTTGGTGGGACA GCCAGACTTAGTGCTTCCTATGAGCGTGTTCTGGCTGGTCCCACAATTCTTCTTTGTGGGGTCAGGAGAGGCGTTCACTT ACATAGGACAGTTGGACTTCTTCCTAAGGGAATGTCCCAAAGGGATGAAAACCATGAGCACTGGTTTGTTTCTAAGCACA CTCTCGTTGGGGTTTTTCTTTAGTTCCATGTTGGTGACACTGGTGCACAAGATGACGGGGCACCGCCAGGGTTGGCTTGC GGATAACCTTAATCAAGGGAAGCTTGATGATTTCTATTGGCTCTTGGCGGTTCTGAGTGGTGTGAATTTGGTGGTGTTTT TGTTTTGTGCTAAGTGGTATGTGTACAAGGACAAAAGGCTTGCTCAGGAGGGCATAGAGTTGGAGGATCAAGACACTGCT GGCCATGCATAG
Protein sequence (LotjaGi4g1v0207100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEKLNCDVISERIIISPYKKAINLQPPLCHKPITPTRLKVPILHFTTHIQMGTLPQTQEQTIQDAWDYKGRPAERSKTG GWTSAAMILGIEGCERLTTLGIAVNLVTYLTGTMHLGNASSANVVTNFMGTSFMLCLFGGFLADTFIGRYLTAAIFATVQ ATGVTILTISTIIPSLHPPRCTVGTSKSCEPASTTQLMLLYLALYTIALGTGGVKSSVSGFGSDQFDETDEGEKKQMVKF FNWFFFFISLGSLAAVTILVYIQDHLGRDWGYGICATTILVFLVVFLAGTRRYRFKKLAGSPLTQIAVVYVAAWRKRRLE LPSDPSLLFNVDDMEDETLRKKKQMLPHSKQFRFLDKAAIKDPKTDGEIRGERKWYLSTLTDVEEVKLIQRMLPIWATTI MFWTVYAQMTTFSVAQATTLDRHIGKSFKIPAASLTLFFVGSILLTVPVYDRIIVPITKRLLKNPQGLTPLQRIGVGLVF SIFAMVAAALTEIKRLHVAHAHGLVGQPDLVLPMSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLST LSLGFFFSSMLVTLVHKMTGHRQGWLADNLNQGKLDDFYWLLAVLSGVNLVVFLFCAKWYVYKDKRLAQEGIELEDQDTA GHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 96 | 96 | - | – | |
| Gene3D | 54 | 630 | 577 | 9.2E-214 | – | |
| PANTHER | 58 | 637 | 580 | 0.0 | – | |
| PANTHER | 58 | 637 | 580 | 0.0 | ||
| SUPERFAMILY | 71 | 625 | 555 | 1.22E-23 | ||
| CDD | 82 | 619 | 538 | 0.0 | – | |
| TMHMM | 97 | 119 | 23 | - | – | |
| Phobius | 97 | 116 | 20 | - | – | |
| Phobius | 117 | 121 | 5 | - | – | |
| Phobius | 122 | 143 | 22 | - | – | |
| TMHMM | 124 | 143 | 20 | - | – | |
| Phobius | 144 | 149 | 6 | - | – | |
| Phobius | 150 | 173 | 24 | - | – | |
| TMHMM | 150 | 172 | 23 | - | – | |
| Pfam | 151 | 585 | 435 | 6.3E-113 | ||
| Phobius | 174 | 192 | 19 | - | – | |
| Phobius | 193 | 214 | 22 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 215 | 242 | 28 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| Phobius | 243 | 263 | 21 | - | – | |
| Phobius | 264 | 268 | 5 | - | – | |
| Phobius | 269 | 288 | 20 | - | – | |
| TMHMM | 272 | 289 | 18 | - | – | |
| Phobius | 289 | 394 | 106 | - | – | |
| TMHMM | 393 | 415 | 23 | - | – | |
| Phobius | 395 | 418 | 24 | - | – | |
| Phobius | 419 | 429 | 11 | - | – | |
| TMHMM | 430 | 450 | 21 | - | – | |
| Phobius | 430 | 450 | 21 | - | – | |
| Phobius | 451 | 470 | 20 | - | – | |
| TMHMM | 471 | 490 | 20 | - | – | |
| Phobius | 471 | 490 | 20 | - | – | |
| Phobius | 491 | 509 | 19 | - | – | |
| Phobius | 510 | 535 | 26 | - | – | |
| TMHMM | 510 | 532 | 23 | - | – | |
| Phobius | 536 | 555 | 20 | - | – | |
| TMHMM | 553 | 575 | 23 | - | – | |
| Phobius | 556 | 578 | 23 | - | – | |
| Phobius | 579 | 597 | 19 | - | – | |
| Phobius | 598 | 621 | 24 | - | – | |
| TMHMM | 600 | 622 | 23 | - | – | |
| Phobius | 622 | 643 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0207100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…