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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0208100 |
| Transcript ID | LotjaGi4g1v0208100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14 kDa proline-rich protein DC2.15; TAIR: AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15; TrEMBL-Plants: tr|I3T4V5|I3T4V5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0208100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48188521..48190223) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATAGTAACTCACCGAACCCTCCCCTATAAATACCCCTCCAACTCCATCACTAACTCACACACCAAATTGAAGCAAC TAAGAGTAGCATTCTAAGAGTCTCTTAGTAGCTTCCAACATCTTAATTTCTCAATGGCTTCCAAGGCTGCTATTCTCCTC ACTCTCAACATTCTCTTCTTTACAGTGGTCAGCTCCAGCTATGTTCCATGTCCTCCACCCCCGAAGGGTCACAAAACCCC ACCCTCCACACCAGTCCCAAACCCACCCTCCACAAAACCACCCTCCACAAAGCAGCCTAGTTGCCCTAGGGACACCATCA AGTTGGGTGTGTGTGCTGATGTGTTGGGTTTGATCAATGTGCAGCTTGGAAAGCCACCAAAGACCCCATGCTGCTCCCTC CTTCAGGGTCTTGCTGATCTTGAAGCTGCTGTGTGCCTTTGCACTGCTCTTAGAGCTAATGTCCTTGGAATCAACCTCAA CATCCCCATCAACTTGAGCTTGATCCTCAACTACTGTGGAAAGGGTGTACCTAAGGGATTCGTGTGCTCTTAATTAAACA AACACGTCCTAGCTTTCATCATGGTGTCTGCTTTTTATTAATACTTTGATAATATTTTCCTCCTTCTCATATATACTTTG CCAATGAAATGAACATGTTGTTCATATTTGATTATTGTCATTATTATTATATTTGTAGTGATGGTTGGAACTTGAAGGCT GCTTGTCTTCCTTCTTAGCCTCACTAGTGTTTTGTATTGATCTAAGTAAAAGTTCTATCAATATATAAAAGTCTCTGTTT AAGGAAAGATTCTTACTTTGCTCTACCCATTTCTATTTGATTTCCTTTCCCCTGTTTCCTTTCTTAATTTTCATTCACTC AAGTGCAGAGTTTGTTGAGTAAAAATTTTCAGAAAAATATAGAACTATATTTTTCATTTGGTTCAAATCAAAACATTAAA ATAACGCAAAGAAACTCCTCAGATACTTTCTCCATTAATAAATTAACGACATACAAAACATTTTATCTGCTTCTCCAATT GTCCCCTCTCTGTTTTTTTTTTGGTAAGCCAAAAGATTGTCCCCTCTCTCTCTCTCTCTCTGTGCCATAGCTGTGATGAC AATTAAGCTAAAATGTCCATGACAAAACTATGTGAACTCTGGGAATCGTATACAGTGGTAGAAAGTTACTGGCAGCCTAA GGTCAAAGCCTCTATTTCAACTTGTTTTAAGTGTCTATTGTGTTTACGTGGAATTCCCATCAGTGACCCAATACTGCTTC ACCGCAATTAGTACCTTCTCAGGAACAAGAGGACCATCCTCATGGTCAACCAATTTGGTATCCCATCTCATTCCTCCAAC ATGTTTCTTTACCTTGATTAAAACATCAACATCATGGCGGAATATGATAGCACCTTCTGGTCACAAAATCCGGTCCATCT CGAGAAGAATGTCTTTTATATTGCATTTAGATTTGTACAGACTAAAGAGGCCATGGGCAAGAATGAGGTCATATGTCCTT GGATATGTCCAAAAGCCTTAATACCAATCATGATAGATGTCAATCAGGCCTTGCTCGTATATGACACCCAATGTATTTTT CCCAGCTATAGTAGTCACAGCATTCATAAACCATAACTTAATTAGAAGATTCAATAGCTGCAGCAAAACTACCCAAACCA GCATTCATATCCATAATGTTGCA
CDS sequence (LotjaGi4g1v0208100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCAAGGCTGCTATTCTCCTCACTCTCAACATTCTCTTCTTTACAGTGGTCAGCTCCAGCTATGTTCCATGTCC TCCACCCCCGAAGGGTCACAAAACCCCACCCTCCACACCAGTCCCAAACCCACCCTCCACAAAACCACCCTCCACAAAGC AGCCTAGTTGCCCTAGGGACACCATCAAGTTGGGTGTGTGTGCTGATGTGTTGGGTTTGATCAATGTGCAGCTTGGAAAG CCACCAAAGACCCCATGCTGCTCCCTCCTTCAGGGTCTTGCTGATCTTGAAGCTGCTGTGTGCCTTTGCACTGCTCTTAG AGCTAATGTCCTTGGAATCAACCTCAACATCCCCATCAACTTGAGCTTGATCCTCAACTACTGTGGAAAGGGTGTACCTA AGGGATTCGTGTGCTCTTAA
Protein sequence (LotjaGi4g1v0208100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASKAAILLTLNILFFTVVSSSYVPCPPPPKGHKTPPSTPVPNPPSTKPPSTKQPSCPRDTIKLGVCADVLGLINVQLGK PPKTPCCSLLQGLADLEAAVCLCTALRANVLGINLNIPINLSLILNYCGKGVPKGFVCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| PANTHER | 2 | 138 | 137 | 2.3E-52 | – | |
| PANTHER | 2 | 138 | 137 | 2.3E-52 | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 139 | 118 | - | – | |
| MobiDBLite | 28 | 52 | 25 | - | – | |
| MobiDBLite | 28 | 57 | 30 | - | – | |
| Gene3D | 51 | 139 | 89 | 2.0E-29 | – | |
| CDD | 55 | 138 | 84 | 1.67247E-33 | ||
| SMART | 57 | 138 | 82 | 1.4E-8 | ||
| Pfam | 57 | 138 | 82 | 9.4E-29 | ||
| SUPERFAMILY | 59 | 138 | 80 | 7.94E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0208100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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