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LotjaGi4g1v0208900.2

Overview

Field Value
Gene ID LotjaGi4g1v0208900
Transcript ID LotjaGi4g1v0208900.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Acid invertase 1; TAIR: AT1G12240.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase; TrEMBL-Plants: tr|G7JK43|G7JK43_MEDTR Soluble acid invertase FRUCT2; Found in the gene: LotjaGi4g1v0208900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:48543462..48547194) extracted from Lotus japonicus Gifu genome v1.2.

TCTTCCAACTTCTCACACCCCCCTCCTCCACCACCAACAGCACCACCACCCTCGCCGCCACCGCAACGACATCCTCCTCA TTGTCTTCGGCTCACTCCTCCTCGCTTCCCTCGTCACCTTCGCCGGCCACAGTGCCTCCAAATCACGCGCTCCTCACCAC CATGCTGGTGTGGCGTCATCGGAATCAACAGTGCCTTCCCGCGCCGTTTCGCGCGGTGTTTCAGAAGGCGTGTCGGAGAA GACGAACAGGTTGTTCGCTGCCGGCGGCGAAGGTGGAGGAGCGGAGTATTTTCCGTGGAACAACAGCATGCTGTCGTGGC AGAGAACTACGTTCCATTTTCAACCAGAGAAGAATTGGATGAACGGTAATTTTTAATTGATGCATTCATTGTGCTGAATT TGATTTCGTTGTTTGCTTGATTTTCACCGTCAATTCCCAAATCACACGGTTTAATTTGATTGCAATTTGCAAATCAGAAC CTGTTTCATGTTTTCTGCGGCGGAGATAGTGGAATGGAGTTTAATAAGAGATTTGATTGGTTTGTTTGTGTGATTTTTAT TTAATTGAAAAAGATACCACTTTTTCCGAACAACATGGATGAAGATTTTGTCATTCTCTATTGGGAATATACAGAATCTT TATAATAGACAAAAAGAAAAACAGTGAAAAGTGATTAGAATGGTTGTTTTTAGTGTCAAAAAACAGTCTTATTTGAATGG TTTTCTTTAATTTTAATTGAATTGAAGTATCAATTTTCACCTTTTTCTCAGGCTAATTTTTTACCTTATTTTTTCATGGA TGACTCTGGCTTGGAATATTGGGGGAACCTGTTCTTTTGCTATATTGTTCTGCTGCTTCAGATCCTAATGGTGAGAACAC TTCTGTCTTTTATCCTTGTGGAAACTTTATATCAAATTGTATAGTTTTGTTTTATATACACCATTTTTTCATTTATCCCA TTTTACTTAATTTTTCTCATTTCTCTTTTGTTTTCTTCTCAATTCTCATGTATCATATTTCTCACTTCTCTTTCTTATAT AAAATGATATTGGATGGTGAAGAGTTTTTCCTATTAATTGTCGGACACACTCTAAAATTGTCCCTGTCTCATCGTACATA AGAAGAGAAAAGGGAAAAATAAGATACATGATGAAAAATGAGAACGATAGAAATAAAAATTTGCAAAAATGAGTTGAACA AAAGAATGAAATTTAAATGAATTATAGTTTTAGTTGAGTTGACACTATCAAAGTAATAAATAGAATTGAAAATACTAGGA CCCAGTAACCTGACTACACAGGCTCAACTAGATTTTGACACCATAAATTTTACCTTGCAAATAAAATCTCATAAATTATG TCAACCCCACAAAATTATTTAGCAAAAGCTTTATCTTTTTCAACATTTAAAATTACCAAGTTTCAAAAAAAAAAACATTT AAAATTACCAAAGTTTTCAAAAAGCCAGAATTGCCCCCATCAAACTATTTTGGCCAAATTACATCCTCCATCAGAATCTA GAACGCATAGGCATAATAGTAGTCAGTAAACTCAGTACCTTCAACTTATGCATTTCAGGTCCTATGTACTACAAGGGATG GTACCATTTCTTCTACCAGTACAACCCAAACGGTGCCGTATGGGGCGACATAGTTTGGGGACATGCAGTATCAAGAGACA TGATCCACTGGCAGCACCTTCCCCTAGCAATGGTAGCAGACCAATGGTATGACAAAATGGGAGTGTGGACCGGTTCAGCC ACCATCTTACCAGACGGTCAGATCATCATGCTCTACACAGGTTCAACCAATGAGTCAGTGCAGGTTCAGAATCTCGCATA CCCTGCTGACCCCTCAGACCCTCTCCTTGTGGACTGGATCAAATACCCTGCAAACCCGGTTCTGCTCCCTCCACCAGGGA TTGGTTTCAAGGACTTCAGGGACCCAACCACAGCTTGGTTCACCTCTGAAGGGAAATGGCGTATCACCATCGGGTCCAAG CTTAACAAAACCGGCATTGCCTTGGTTTATGACACTGTGGACTTCAAAACCTATGAGCTTAAGAAGGATTTGCTCAATGC TGTCCCTGGCACAGGCATGTGGGAGTGTGTAGATTTCTTCCCTGTGTCCAAGAAGGGTGAGAATGGATTGGATACTTCTA TTAATGGGGGTGATGTGAAGCATGTTATGAAGGTGAGTTTGGATGATGATAGACATGATTACTATTCCATTGGGACTTAT GATGAGAAGAAGGTTAAGTTCACAGCTGATGATTTGAAGAATGATGTTGGTATTGGATTGAGGTATGACTATGGTATATT CTATGCTTCCAAGACATTTTTTGATCAGAGTAAGGATAGGAGAGTGTTGTGGGGTTGGATTGGTGAGTCTGACAGCGAAT ATGCTGATGTAGCCAAAGGTTGGGCATCAGTTCAGGTAAATCTAAATTTAAAACCCTTCTTATGGATTCTCTGCATTCAC GAAGTCGCGCAATCTTATTCTTTAAATCACGATCAGTCAGCTCGGATTTTAAATTTATATCTATCATCTGGTTTTTGTGA AATATTTAAAGTGAATGATTTTGATCGGATGGTTCAGATTGCCTAATTGCGTGACTGTTGGGTACCGTTGCGGCTGCAGG GAACCGAGTTCAGTGTACTTATAATTTTTTAACTCTCTTGCTAGTAATAACTAATAACATTGTTAAATTTTAATGTGCAG GGTATTCCAAGAACAGTGACACTTGATAAGAAGACTACAACCCACTTACTTCAGTGGCCTATTGCAGAGGTGGATAGTTT AAGATTAAGAAGCGACGAATTCAAAAATTTGAAGGCAGCGCCAGGGTCAGTGGTGTCACTAGACATTGAATCAGCCACAC AGGTTTGTGTTCATGTTTTCAAATTCCTAAAATTTGTAATCCAGAGACATTTGACTAACCTGGCTAGAAGTGATGTATAT GTCAATGCAACAGTTGGACATTGTTGCTGAGTTTGAGATAGACAAGGAAGCACTAGATAAAGCACCACAATCCAATGTTG AGTACACTTGCAGCACAAGTGGTGGAGCTTCCAAACGAGGTGCCTTGGGACCTTTTGGTTTCCTAGTTTTGGCAGATAAT GGTCTTTCTGAATACACTCCTGTATATTTCTATGTCGTCAAAGGAAGCGACGGAAAGCTTAAGACATCATTCTGCTCTGA TCAATCAAGGTATTAGACATTTCTTAATTTAGCATCAATAATCCGGATCACAATTGTCTGTCATCATTTCTTGTCTCACC ATTAAAATTTTGTTATGACACTTAGAAATGACAAATTGTGGTAAATTGTTACATTGGTTTTGTAGGTCTTCTGTGGCAAA TGATGTTCACAAGCAAATCTATGGGAGCGCTGTTCCGGTACTTGAAGGCGAAAAGTTGTCCTTGAGGGTACTGGTAAGTA GTAGAGCCTCTCACTTTGATACACATCTTATGTGCATTATGCAGACCAAACTGTAATCTTGATGGGTTTTTCTGGTTATT ACAATTTAGGTGGATCATTCTATAGTTGAAAGCTTTGTTCAAGGTGGAAGGACCACTGTGACATCCCGGGTTTACCCAAC AAGGGCAATCTATGGGGCTGCTCGGTTGTTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCATTCAAGATTT GGCAGATGAATTCTGCATTTATACGCCCATACCAACCAGATCAGAAGAGCTAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0208900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTGTCGTGGCAGAGAACTACGTTCCATTTTCAACCAGAGAAGAATTGGATGAACGATCCTAATGGTCCTATGTACTA CAAGGGATGGTACCATTTCTTCTACCAGTACAACCCAAACGGTGCCGTATGGGGCGACATAGTTTGGGGACATGCAGTAT CAAGAGACATGATCCACTGGCAGCACCTTCCCCTAGCAATGGTAGCAGACCAATGGTATGACAAAATGGGAGTGTGGACC GGTTCAGCCACCATCTTACCAGACGGTCAGATCATCATGCTCTACACAGGTTCAACCAATGAGTCAGTGCAGGTTCAGAA TCTCGCATACCCTGCTGACCCCTCAGACCCTCTCCTTGTGGACTGGATCAAATACCCTGCAAACCCGGTTCTGCTCCCTC CACCAGGGATTGGTTTCAAGGACTTCAGGGACCCAACCACAGCTTGGTTCACCTCTGAAGGGAAATGGCGTATCACCATC GGGTCCAAGCTTAACAAAACCGGCATTGCCTTGGTTTATGACACTGTGGACTTCAAAACCTATGAGCTTAAGAAGGATTT GCTCAATGCTGTCCCTGGCACAGGCATGTGGGAGTGTGTAGATTTCTTCCCTGTGTCCAAGAAGGGTGAGAATGGATTGG ATACTTCTATTAATGGGGGTGATGTGAAGCATGTTATGAAGGTGAGTTTGGATGATGATAGACATGATTACTATTCCATT GGGACTTATGATGAGAAGAAGGTTAAGTTCACAGCTGATGATTTGAAGAATGATGTTGGTATTGGATTGAGGTATGACTA TGGTATATTCTATGCTTCCAAGACATTTTTTGATCAGAGTAAGGATAGGAGAGTGTTGTGGGGTTGGATTGGTGAGTCTG ACAGCGAATATGCTGATGTAGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAGACT ACAACCCACTTACTTCAGTGGCCTATTGCAGAGGTGGATAGTTTAAGATTAAGAAGCGACGAATTCAAAAATTTGAAGGC AGCGCCAGGGTCAGTGGTGTCACTAGACATTGAATCAGCCACACAGTTGGACATTGTTGCTGAGTTTGAGATAGACAAGG AAGCACTAGATAAAGCACCACAATCCAATGTTGAGTACACTTGCAGCACAAGTGGTGGAGCTTCCAAACGAGGTGCCTTG GGACCTTTTGGTTTCCTAGTTTTGGCAGATAATGGTCTTTCTGAATACACTCCTGTATATTTCTATGTCGTCAAAGGAAG CGACGGAAAGCTTAAGACATCATTCTGCTCTGATCAATCAAGGTCTTCTGTGGCAAATGATGTTCACAAGCAAATCTATG GGAGCGCTGTTCCGGTACTTGAAGGCGAAAAGTTGTCCTTGAGGGTACTGGTGGATCATTCTATAGTTGAAAGCTTTGTT CAAGGTGGAAGGACCACTGTGACATCCCGGGTTTACCCAACAAGGGCAATCTATGGGGCTGCTCGGTTGTTCTTGTTCAA CAATGCTACTGAGGCCACTGTGACAGCCTCATTCAAGATTTGGCAGATGAATTCTGCATTTATACGCCCATACCAACCAG ATCAGAAGAGCTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0208900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSWQRTTFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWQHLPLAMVADQWYDKMGVWT GSATILPDGQIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPANPVLLPPPGIGFKDFRDPTTAWFTSEGKWRITI GSKLNKTGIALVYDTVDFKTYELKKDLLNAVPGTGMWECVDFFPVSKKGENGLDTSINGGDVKHVMKVSLDDDRHDYYSI GTYDEKKVKFTADDLKNDVGIGLRYDYGIFYASKTFFDQSKDRRVLWGWIGESDSEYADVAKGWASVQGIPRTVTLDKKT TTHLLQWPIAEVDSLRLRSDEFKNLKAAPGSVVSLDIESATQLDIVAEFEIDKEALDKAPQSNVEYTCSTSGGASKRGAL GPFGFLVLADNGLSEYTPVYFYVVKGSDGKLKTSFCSDQSRSSVANDVHKQIYGSAVPVLEGEKLSLRVLVDHSIVESFV QGGRTTVTSRVYPTRAIYGAARLFLFNNATEATVTASFKIWQMNSAFIRPYQPDQKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31953:SF41
1 535 535 5.7E-284 –
PANTHER
PTHR31953
1 535 535 5.7E-284 –
SUPERFAMILY
SSF75005
3 329 327 5.18E-108
IPR023296
Pfam
PF00251
10 328 319 1.2E-109
IPR013148
SMART
SM00640
10 483 474 6.8E-255
IPR001362
ProSitePatterns
PS00609
10 23 14 -
IPR018053
Gene3D
G3DSA:2.115.10.20
15 338 324 1.4E-224
IPR023296
CDD
cd18624
16 316 301 1.61664E-170 –
SUPERFAMILY
SSF49899
328 527 200 1.11E-36
IPR013320
Pfam
PF08244
331 522 192 1.5E-29
IPR013189
Gene3D
G3DSA:2.60.120.560
339 524 186 1.4E-224 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0208900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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