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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0220000 |
| Transcript ID | LotjaGi4g1v0220000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BAG family molecular chaperone regulator-like protein; TAIR: AT5G52060.1 BCL-2-associated athanogene 1; Swiss-Prot: sp|Q0WUQ1|BAG1_ARATH BAG family molecular chaperone regulator 1; TrEMBL-Plants: tr|A0A151SLE5|A0A151SLE5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0220000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:51801979..51804483) extracted from Lotus japonicus Gifu genome v1.2.
TGAATAAGTCCACCGACCCAAATCTGGAAAAGTAAATGGACAATAGCCAACTGGCACCAGATTTTGGAGCAGATTTCTTT ACTACATACTGTACCTTTTCCCTTTTCATCTTCCCCTACCCTGTTCTATACCTCTCAGGCTCTCATACATCACATCTTTA TGGTTTTCCAATGCAAAATACAAGCTGTATTTCTTCTTCTTTTCTCATTTCCATTTTTCCTTCCTCTTCATGTTGTTTAT TCGAGAACAACTATGCATTTATACATAATAATGTTTCAATTAATGTTTTCATAGGGAATTATAATACATGAAACAGAAAA ACAAACAGAGCAGATACAGAGCACATGGTTCTTCACTTCTTCTTTCTCTTCTCATTAATTAATTTTTCTTACTCCTATTA ATTTTCAAAAACAATGCAATGTCTTTCTACTAATCCCAGGTGAAACCTCCCTTACTCCTCCCTATTGTTTCGCTCACACG TTATCAATTTTGTTTTTTTACCTTTTTCCCTGTCAGTTTCCTTTTCTCTTTCTCCACCTTCTCTGTTTTTGTTTTCACTT TTCACCAACACCACACTAACTTAAAGGTTTGTACTTTGTACCCTTATCTTCCTTCTAAGTTATACTAATCTTACTCTCTT GGACCTTCCATTCCTGTTGATTCTTCCACTGCACTTAATCTCTTTTGGGCAGGTCAAGGTTCTCTCTTCTTTCCCCACTT TCCTACTCTACAAGGGAAGCACCGAAGCACTTATTTAGATAAATACCCTTTTTTGCTCTGTTTTGACAACAGGGGAGAAC ACAAAACTTGGAATGCACTCAAACAAGGAAGCAACAACCAAGTCAACGATCAACACCATGTTTTCAAAGGGTCATGGTAA CCCAAATGTGGCTGATTTGGAATTAAGGCCTGGAGGAATGGTGGTTCAAAAGCGTAACTCAGATTCTGATATGAATCAAA GTTCTTCCTCTGTTTTTAATTCTACCATCAGAGTGAAAGTGAAGTATGGCTCGTCCTATCACGAGATTCGTACCAGTCCT CATGCAAGTTTTGGTACATTCAGCTTCAAATTTCCATTCTTTGTTTGTTTGTTTGATTATTATTTTTCAGAGATATTTTT TTTTTATTTTATGTTGATTTTTTATTGGGTTATGGTTTTCTGGGGTGCAGGGGAATTGAAGAAAATGTTGACAGAACAAA CAGGATTGCATGTTCAGGATCAGAAATTGATGTTCAAGAAGAAAGAGAGACATTCAAAATCATATCTTGATGTTGAGAGG GTCAAAGATGGATCAAAGCTGGTGCTGCTTGAGGACATTGAGTGTAGAGAAAGAAGAATACTCGAGGCGTTACAGATTGC CAAGAAGGAGAAGACTTCAAAATCCTTGAAAGAAATCACCCATGAGGTTGACAAACTCGCCAAGAAGGTATCAATTTCAC AAACAATATTAAAATTTTCATTTTTTGTTTTTGTTTTACAATAATAAATGGCTTTAATTCACTGAAATTTTGGGTAGGTT GTAGCTTTGGAGGCTGCTGCTACTACAGGTGGAGTTGCAGAAGAGTTGGATGTTGAGACTTTGACAGAAAATTTGATGAG ATTATTGATTGCATTGGATGAAATTTATGGTGAGGGTGAACTGAAATTGCAGAGAAGAGAGCAGGTAACTCTTGATTTTC AAAACTGCAACCTGTCAATTCAATTGCTATTATGTCATTTATTTTACATTGTAACTTGTACGTTTTGAAAAAAAAAATGA ATGTGAAGGTTTGGAGAGTTCAGAAACACATTGAGACTCTAGACAAGTTGAAGAATCCAAAGCCAAAATCAACTCCCCTA AGAAATGAAGGTAACATGGAATGTGAGGTGCATTCTGATGTTCAGAAGCAGCACATGAAAGAGAGGCAGGGAAATACAGC GGTGGAACAAATTTCTAAGATGCAGCAGCAACTACAGTTGAAACATTCTGACTCAGTTGTAGTAACAACAAAATGGGAAA TATTCGATTAAGGTTTTTAGGTTGCAACAAAACTGTGTCCCACATTAGGCATCTAGGTGTGGGTTGCTTTCCTATTGAGA AGTTCAATTCTTTTTATTTAGCTGCAAATTTAATTTGAGAAGCAAATTAGTAAAGGGTAGTTTGTGTTTCCTTCTCCTAG TTGCCTTTTTATGGTAGGATCCTAAACTCCATCCAAGTTGTATTTGTGTAGCAAAATGGCAAATGCATGGTATGTTGGAT TGTAAAGTTTAGGGACAGAATGAACATTTCATGGTTGTAAATTTTATATATTCTTTCCCTAATACACTAATACATGTATC TTTTACGGGAGTCAATCAATTCAAGACCAAAACATTGTAGTATTCTGATAGAAATAGTCAATCATGCTTGACACTTAATT CTGACATCCATATTCGGGGGTAATTTGCTCGCCGACTGAATCTTATATATCAAGCTGTAATTTTTATATGGATGAAAATC AGAAAATTATTTTGGCAACTGTTGA
CDS sequence (LotjaGi4g1v0220000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACTCAAACAAGGAAGCAACAACCAAGTCAACGATCAACACCATGTTTTCAAAGGGTCATGGTAACCCAAATGTGGC TGATTTGGAATTAAGGCCTGGAGGAATGGTGGTTCAAAAGCGTAACTCAGATTCTGATATGAATCAAAGTTCTTCCTCTG TTTTTAATTCTACCATCAGAGTGAAAGTGAAGTATGGCTCGTCCTATCACGAGATTCGTACCAGTCCTCATGCAAGTTTT GGGGAATTGAAGAAAATGTTGACAGAACAAACAGGATTGCATGTTCAGGATCAGAAATTGATGTTCAAGAAGAAAGAGAG ACATTCAAAATCATATCTTGATGTTGAGAGGGTCAAAGATGGATCAAAGCTGGTGCTGCTTGAGGACATTGAGTGTAGAG AAAGAAGAATACTCGAGGCGTTACAGATTGCCAAGAAGGAGAAGACTTCAAAATCCTTGAAAGAAATCACCCATGAGGTT GACAAACTCGCCAAGAAGGTTGTAGCTTTGGAGGCTGCTGCTACTACAGGTGGAGTTGCAGAAGAGTTGGATGTTGAGAC TTTGACAGAAAATTTGATGAGATTATTGATTGCATTGGATGAAATTTATGGTGAGGGTGAACTGAAATTGCAGAGAAGAG AGCAGGTTTGGAGAGTTCAGAAACACATTGAGACTCTAGACAAGTTGAAGAATCCAAAGCCAAAATCAACTCCCCTAAGA AATGAAGGTAACATGGAATGTGAGGTGCATTCTGATGTTCAGAAGCAGCACATGAAAGAGAGGCAGGGAAATACAGCGGT GGAACAAATTTCTAAGATGCAGCAGCAACTACAGTTGAAACATTCTGACTCAGTTGTAGTAACAACAAAATGGGAAATAT TCGATTAA
Protein sequence (LotjaGi4g1v0220000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHSNKEATTKSTINTMFSKGHGNPNVADLELRPGGMVVQKRNSDSDMNQSSSSVFNSTIRVKVKYGSSYHEIRTSPHASF GELKKMLTEQTGLHVQDQKLMFKKKERHSKSYLDVERVKDGSKLVLLEDIECRERRILEALQIAKKEKTSKSLKEITHEV DKLAKKVVALEAAATTGGVAEELDVETLTENLMRLLIALDEIYGEGELKLQRREQVWRVQKHIETLDKLKNPKPKSTPLR NEGNMECEVHSDVQKQHMKERQGNTAVEQISKMQQQLQLKHSDSVVVTTKWEIFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 28 | 28 | - | – | |
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 13 | 295 | 283 | 3.4E-116 | ||
| PANTHER | 13 | 295 | 283 | 3.4E-116 | – | |
| SUPERFAMILY | 47 | 129 | 83 | 9.18E-16 | ||
| Gene3D | 57 | 128 | 72 | 1.7E-19 | – | |
| ProSiteProfiles | 57 | 127 | 71 | 9.765 | ||
| CDD | 58 | 127 | 70 | 3.01302E-25 | – | |
| SUPERFAMILY | 118 | 231 | 114 | 1.15E-16 | ||
| Coils | 127 | 173 | 47 | - | – | |
| Gene3D | 129 | 233 | 105 | 1.0E-27 | ||
| SMART | 152 | 230 | 79 | 2.6E-5 | ||
| ProSiteProfiles | 152 | 230 | 79 | 10.353 | ||
| Pfam | 154 | 228 | 75 | 6.0E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Chaperone binding | Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport. |
Expression pattern of LotjaGi4g1v0220000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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