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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0222100 |
| Transcript ID | LotjaGi4g1v0222100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component, putative; TAIR: AT5G50380.1 exocyst subunit exo70 family protein F1; Swiss-Prot: sp|Q9FGH9|E70B1_ARATH Exocyst complex component EXO70B1; TrEMBL-Plants: tr|A0A0L9TR87|A0A0L9TR87_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0222100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:52705696..52709773) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAGGCAAAACTGTAATAAAACCCACGTTATTAAATTTTGGAAGTCTTGTATAAACGAGTCCACAGCGTGATTAACA AGGCGTGATTGAAAAAACTGAAAACCCCATCCTGATTTCACGTTATTGCCGGCCAACAGTGTCTTTCTCCCCCCAGATTT TCCATCTTCCCAAACACTCCCTAACGACAACAACACCCTTCACCCTTGTTAATAAAAACAAAAAAACAAAAAAACCACAA ATTCTGACATATCCGAGAATAATGCTCATCATCATCAGCATATCTTAATCTTCATTCTTCCATCCATGTTCTTTCCCCTC TCTCTTTCCCTTTCTCTCTTCACTCCAAACAAACCCTTCTTCGATTCTTCTACTTCACTCTTGTTCCAAACTTCCAATCA CACAAAATCAATTATCTAAAAAAAGGAACAAACAAACAAAACCCTAGACCGTTTCGGTGGAGGAAACGAAACGATGGCCA CCACCACCACCAGTCTTACCGGCGGAGCTGGCGGAGACGACCGTGTCCTCGCGGCGGCTCAACAGATCCTCAAGAGCCTC AAAACCCCCAAGGAGGATCGCGACGACATGCTGTTAATCTTCTCCACCTTCGATAACCGCCTCTCCGGCATCTCCGACCT CATCAACAACGCCGATGACTCCAAATCCTCCACCGAAGAAGAGCTTGACCGCTTCGACGCCGCCGAGAAGGTCATCCTCT CCGACGCTTCTCTCTCCGGCGAGCCTTCGCATCAATCGACGTCGCTGTTTGATCCGCCGAATGATCCCGTTGAGTATTTC ACCGCTGTTGATGAGATCATCCAGTGGATGGAGCATTTCTCGATCTCCTCCGCCGGAGAGACCGTCCAGGCCGTAGTTGA CCGCGCCGAGAACGCGATCCAGCTCGCTATGTCGAGGCTTGAGGACGAGCTTCGTCACGTGCTGATCTGCAACACCGTCC CTCCCGATGCTGTTAGCCGATGCGGCGGCTCGACCCGGAGATTCTCCACCTCGTTCGGCTCGCACGATGGTCCGATCTAT GAGAATCTTGAGAGCTTCGGCGAGGGCAGTGATCGTGGATGTCACCGGTTTAATCCGAGCCTTGGGGATGATTTGTTTGT TGATTTGGTGCGTCCTGAGGCGATTCCGAACCTCAAGGACATCATCGATCGCATGGTTAGGTCTGGTTATGAGAGGGAGT GTCTTCAGGTATATAGCGGTGTTCGTCGTGATGCTTTGGATGAGTGTTTGATTATTCTTGGCGTTGAGAAGCTGAGTATT GAAGAGGTGCAGAAGATTGATTGGAAGAGTTTGGATGAGAAGATGAAGAATTGGGTGCATGCGGTTAAGGTGGTTGTTGG GGTTTTGTTGAGTGGGGAGAAGAGGCTGTGTGAGAGTTTGTTTGGTGAATTGGAGGAGTTGAAGGAGGTAGGTTTCAATG AGATTGCTAAAGGGTGTATTATGCAGTTGTTCAATTTCGCAGAGGCCATTGCCATTTGTAAGAGGTCGCCGGAGAAGTTG TTCAGGATATTGGATATGTATGAGGCTTGGAGTGATGCTTTGCCTGATTTGGAGGATATGGTTTCGGTTGTGTATGTGAT CAATGAGGCCAAGGTGGTGCTGAAGGGGCTTGGTGAGGCAGCCAAAGGGACATTTACTGAGTTTGAGAATTGTATTCGGA ATGAGACTTCTAAAAAACCAGTACTCACTGGGGATGTTCATCCTCTGCTTCGATATGTCATGAATTACCTGAAGTTGCTT GTGGATTATGGTGCCGCGATGGATTCACTTTTGGAAATCAGTGAAGAGGATCTTTACCGTTTTCAAAATGATTTGGGTGG TGATGGTTCCCAGTTAGAGACCATGTCCCCGTTAGGGCGTCAAGTACTGTTGTTGATGTCTGAGCTTGAGTACAATCTTG AGGAGAAGTCTAAACTCTATGAGGACGCCGCATTACAGCAGGTGTTTTTGATGAACAATCTATATTACCTGGTGCGGAAA GTGAAGGACTCGGATCTTAGGACTGTGTTGGGTGATGATTGGATTCGTAAGCGCCGCGGTCAGATAAGGCAGTATGCAAC AGGCTACCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCAT CAAAGGTGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCATGTTTTGAAGAAATATACAGGGTTCAGACTGCTTGGAAG GTACCGGATGAACAGCTTCGTGAGGAGATGCGAATATCTATATCAGAGAAGGTGATTCCTGCATACCGCTCGTTTGTGGG GAGGTTTAAGAGTCAGCTAGAGGGAAGGCATTCGGGGAAATACATTAAGTATACACCAGAGGATCTAGAGACCTATTTAT TAGATTTATTTGAAGGATCCCCTGCTGTGTTGCATCACATAAGGAGAAAGAGTACATAGTATACTGTAAGATATGCCTTC TACAGGTGAACTCATTTTATGTGAGGATTAGTTTGAAAATATTTCCTGTCTCATGTGTATCCTCTACCTGGATAGGTGTT TATGTTACAGATCTTAATGTTAGAATGGGATTTTGTGAATTCAACTTTCCTCCCATGCCCCTTCCCAAACATCCAAAAAA GATTTTTCTTTCTTTTTAGCTCTGCAAAGTGGGAATACTGTAATATCTTTTGTATATATTCACAAATGTAGTGTCTCGCA CAGCTTATCGATGTCGTTGTCATTAATCACTATACTTGTTGAAATAGTTCTTTCATCCTTGTAGCTACCTGAAATCTGAT ATTGTGTGTATTTACATACCTGCATGCGACCTGAAATCATTGAAAGGACAATGATTTTCTTACCTGATAGATATTAGATA CATTATTATTTGTGCATATTTTATGGTTAGCTTTTAATAATTGAATTGAGGAAATGAGTTGTAGGTGTAGCAGAAAGCCA GAAACAAGATCTACACATGATTAAAATTTGCACATGAAAAGGCTTACATGACTGTCAGAATGTTGTTGATAATCCAGGAA GAATTCAAGAAATAGGTCAATAGTTAATACTTAATATGATAATGTCTGAAACTTTGATGTGAGAACTGAGTTGATCATAA TGGTTGATGAAAGTTATGTATTAGTAAGTGGTGCCATACTGCAGTGATATTATCTGTTTGTACCTTCAGATCTATAATCT TCTGACACCTACTTTCAGCACTCTTAGATGTTACATCTGGGCATCTTCAGCAATTATTCTGAACTGTCTTTGTTGTATCT CAGTTAGTATATCCCAGCTATGTGGATATGCCAATGTGCCTTAGCTACCTTCAGCAATTATTCTCAGCTGCCTTTGTTAT ATCTCAATTAGTAGCTTCAGCTTTGTGGAAATGCTATGTCTTTCCCTCAAAGTTTTAGCTTTGGCAAGAAATTTGAACTC ATCAAGAATTTTTCCTTTTGCTCTACTGAACTTTCAGATTAAGCATACTTTTTCAGTCATTTGCATGTATTGAGACTTCA TGGCATTGCATATGTAACTACTGAAACTAAATAAGGCATTTGCATGTTATTCTTCTTTGTTAATATGGCTTGTTAATATG GCAGTGGTGGGTTGACATCGAATTCACTTCATGGCATTGCATCAGTAACTATTGAAACTCTTGTCATGATTTGCCAGTAG TTTTACTTGCTAGAGATTGTTACTTGCTCATTGCATCTGCATTTTCATTCAGGTATTACTTTGAATTCATACTTTTTGTA AATGGCCAAAACAAAAATAGTAATTTGCCTTTGTTAAAAACATCATGTTTCAGAGCAGTTTGGTTAGCTTTGGCTTGTCT AAACTGCAGTAATTCTGAGCACGTGAAGTAGCCTGTTCTCTCCATGGAGATTGGAGAGTTGACTTTTAAGAAAATGGGTC ATGAATTTTATGTAACTCATCAAATTAAAAGCCCTCTTTAGGAATTCGTGTTTTATCATCCAAGATGTCTTGTAACGTGT GCGAGCTGCAATTCAGACGCACACTTAGCCTTGTTGTGGGAAACACGAACAATAGAACAACTAGTGTGTTTGGATTTC
CDS sequence (LotjaGi4g1v0222100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACCACCACCACCAGTCTTACCGGCGGAGCTGGCGGAGACGACCGTGTCCTCGCGGCGGCTCAACAGATCCTCAA GAGCCTCAAAACCCCCAAGGAGGATCGCGACGACATGCTGTTAATCTTCTCCACCTTCGATAACCGCCTCTCCGGCATCT CCGACCTCATCAACAACGCCGATGACTCCAAATCCTCCACCGAAGAAGAGCTTGACCGCTTCGACGCCGCCGAGAAGGTC ATCCTCTCCGACGCTTCTCTCTCCGGCGAGCCTTCGCATCAATCGACGTCGCTGTTTGATCCGCCGAATGATCCCGTTGA GTATTTCACCGCTGTTGATGAGATCATCCAGTGGATGGAGCATTTCTCGATCTCCTCCGCCGGAGAGACCGTCCAGGCCG TAGTTGACCGCGCCGAGAACGCGATCCAGCTCGCTATGTCGAGGCTTGAGGACGAGCTTCGTCACGTGCTGATCTGCAAC ACCGTCCCTCCCGATGCTGTTAGCCGATGCGGCGGCTCGACCCGGAGATTCTCCACCTCGTTCGGCTCGCACGATGGTCC GATCTATGAGAATCTTGAGAGCTTCGGCGAGGGCAGTGATCGTGGATGTCACCGGTTTAATCCGAGCCTTGGGGATGATT TGTTTGTTGATTTGGTGCGTCCTGAGGCGATTCCGAACCTCAAGGACATCATCGATCGCATGGTTAGGTCTGGTTATGAG AGGGAGTGTCTTCAGGTATATAGCGGTGTTCGTCGTGATGCTTTGGATGAGTGTTTGATTATTCTTGGCGTTGAGAAGCT GAGTATTGAAGAGGTGCAGAAGATTGATTGGAAGAGTTTGGATGAGAAGATGAAGAATTGGGTGCATGCGGTTAAGGTGG TTGTTGGGGTTTTGTTGAGTGGGGAGAAGAGGCTGTGTGAGAGTTTGTTTGGTGAATTGGAGGAGTTGAAGGAGGTAGGT TTCAATGAGATTGCTAAAGGGTGTATTATGCAGTTGTTCAATTTCGCAGAGGCCATTGCCATTTGTAAGAGGTCGCCGGA GAAGTTGTTCAGGATATTGGATATGTATGAGGCTTGGAGTGATGCTTTGCCTGATTTGGAGGATATGGTTTCGGTTGTGT ATGTGATCAATGAGGCCAAGGTGGTGCTGAAGGGGCTTGGTGAGGCAGCCAAAGGGACATTTACTGAGTTTGAGAATTGT ATTCGGAATGAGACTTCTAAAAAACCAGTACTCACTGGGGATGTTCATCCTCTGCTTCGATATGTCATGAATTACCTGAA GTTGCTTGTGGATTATGGTGCCGCGATGGATTCACTTTTGGAAATCAGTGAAGAGGATCTTTACCGTTTTCAAAATGATT TGGGTGGTGATGGTTCCCAGTTAGAGACCATGTCCCCGTTAGGGCGTCAAGTACTGTTGTTGATGTCTGAGCTTGAGTAC AATCTTGAGGAGAAGTCTAAACTCTATGAGGACGCCGCATTACAGCAGGTGTTTTTGATGAACAATCTATATTACCTGGT GCGGAAAGTGAAGGACTCGGATCTTAGGACTGTGTTGGGTGATGATTGGATTCGTAAGCGCCGCGGTCAGATAAGGCAGT ATGCAACAGGCTACCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGT AATGCATCAAAGGTGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCATGTTTTGAAGAAATATACAGGGTTCAGACTGC TTGGAAGGTACCGGATGAACAGCTTCGTGAGGAGATGCGAATATCTATATCAGAGAAGGTGATTCCTGCATACCGCTCGT TTGTGGGGAGGTTTAAGAGTCAGCTAGAGGGAAGGCATTCGGGGAAATACATTAAGTATACACCAGAGGATCTAGAGACC TATTTATTAGATTTATTTGAAGGATCCCCTGCTGTGTTGCATCACATAAGGAGAAAGAGTACATAG
Protein sequence (LotjaGi4g1v0222100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATTTTSLTGGAGGDDRVLAAAQQILKSLKTPKEDRDDMLLIFSTFDNRLSGISDLINNADDSKSSTEEELDRFDAAEKV ILSDASLSGEPSHQSTSLFDPPNDPVEYFTAVDEIIQWMEHFSISSAGETVQAVVDRAENAIQLAMSRLEDELRHVLICN TVPPDAVSRCGGSTRRFSTSFGSHDGPIYENLESFGEGSDRGCHRFNPSLGDDLFVDLVRPEAIPNLKDIIDRMVRSGYE RECLQVYSGVRRDALDECLIILGVEKLSIEEVQKIDWKSLDEKMKNWVHAVKVVVGVLLSGEKRLCESLFGELEELKEVG FNEIAKGCIMQLFNFAEAIAICKRSPEKLFRILDMYEAWSDALPDLEDMVSVVYVINEAKVVLKGLGEAAKGTFTEFENC IRNETSKKPVLTGDVHPLLRYVMNYLKLLVDYGAAMDSLLEISEEDLYRFQNDLGGDGSQLETMSPLGRQVLLLMSELEY NLEEKSKLYEDAALQQVFLMNNLYYLVRKVKDSDLRTVLGDDWIRKRRGQIRQYATGYLRASWSKALSCLKDEGIGGSSS NASKVALKERFKSFNACFEEIYRVQTAWKVPDEQLREEMRISISEKVIPAYRSFVGRFKSQLEGRHSGKYIKYTPEDLET YLLDLFEGSPAVLHHIRRKST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 652 | 641 | 1.8E-189 | – | |
| PANTHER | 12 | 652 | 641 | 1.8E-189 | ||
| SUPERFAMILY | 102 | 647 | 546 | 1.52E-155 | ||
| Coils | 135 | 155 | 21 | - | – | |
| Pfam | 285 | 643 | 359 | 8.4E-125 | ||
| Coils | 475 | 495 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi4g1v0222100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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