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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0223000 |
| Transcript ID | LotjaGi4g1v0223000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|I1MUN6|I1MUN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:52791330..52795981) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAAATGGTCAAACGTTAAAAACACTGGCACCCTGTTTGCTTAAATTGAAACCCTTGAAAGACGGCTACGCAGCTT TAGACAACACACAACACAAACCTGAGACTGAGGCTGACGCACGAATGGCACAGTTGAAAGCACTCCCTGCATATCCATCC TCTGCTACTCCTCCTTCCCTGCATGCAACAGGTTCCATTTCCATTTTCTTTACTCTTTGTTAGAGATTTTCATTGGCATG TTCAACTTTTCTCAACTTTAACAACCCCTTCTCTTTTTTTTTTGCAGATCACCTTCTGCATCATCAGTTCTGGAAGGCAA AGCCATCATCATTCAAACAGGTGATCTTTTTAAACTTTATTCCTTAAAGTTTACAAAAACATGTCTGAGCCTATTTGTTT ATTCATGTATTTGTGTTTTGGTGGTTACATGTTGGTCTTATGTGGGACTTTTGTATTGTCTGTAGTTGGGACCAAGAGCT TGTGTTGGTGCTGGTAAACTTCAAGGTGAGAATATGTTTTCTCATGCTCAACCATTTTCTCACCTATGGGAAACTAGAGA CATCAGTACATGTTTCATTATTATTATTATTGAATGACTTGATTTACAAACACAACTCGGAAGAGCTTATCTTGGTTAAT TTTTCATCCTGGGTTTAGTATAAGATCTCCATTACCATTTCAGCTAAACTGACACAATGCTGTTGTAAGTTGTTTAATCA TTTTTTTGTATCCAGTTCCACCTGGGGTTAACACATTTTGAAAAATGGTGTGTCTTTAAATTATGAGAGCATGAACATGT AATGTTTCTTAATTGTTCTTTATAGTTGAATCTTTTAATTAAAAACTTATTAGCTATTAACATGTAGTGTTAAGTGTTTT CCTTTTGTGTTTTTCATCTGTCAGATTTGACTTATCGTTTTGTAAATGAGCATTCCCTAACAGAACTATGTCATGATTGC CATTGGCAAATAAATTTCAGAAGGGGTTTTTTGTAGCTTCTTATGCTATGGATGGTTTTATGTTGGAAACAAATGAGTTT CTTAGAGGCGCTTGTGTTCACCGCTTGCTATATTGATTTGATGCTGTTTGATTTCAAGTTTAAGGTCTGTAATGTTATTG AAATTCGCATGACATGCAGCTATAAAAGCAGTTCTGCGCAATGATACAGATGTAGAAATTTCTGAAACCAAGAAGGGTAG TGGGCTACGAGGCAAATTGAATAAGGTTGTTCTTGCTTACAGTGGTGGCTTAGACACATCGGTCATTGTGCCATGGCTGA GGTATAGCCGTTGCTTGTTCTTTTTCAATTTTCTGTTATATCAGATTTTTTTGATATTAGATTTTTTCTATCAGATTTTT CTTGATGGCAAATACTTCTATGTTGAAAAAGATGTCAATTTTTTTATGTAGAATGTGTAAATAGGGGTTACAAACCATTT AGAGATTGTATACATGACTTGATGAGTTTTAAACCTGAAAAATTCAAATTTTGTAGAGAAGCATGGTAGCAAAATAGACA TTTCTGAATTTTTTTTGGTTGTGATAGGGGATATTCAACAGTAGATACCCATGAAGTTACCTATTGTTGTATAATTGTGC CCTTATTATAATATCTTATTTAGTGATTTTGGCATTGCAGAGAGAATTACGGTTGTGAAGTCGTTTGCTTCACTGCTGAT GTTGGCCAAGTATGTTATGCCTTTTAGTTTAATTTCTTTGATCAACGTTATTGCTGTGTAAACTTGGTTCCTGGAAAAGG TGTTTTAAGATTGTGAACTTCTGGCTTGGGGAATTTGCTCTACTGAATTTGTTGTTTATTTTCTGCATGTCTGGCAAAAA AACTGAATTACACAGGGACTAAAAGAGTTGGAAGGTTTAGAAGAGAAAGCCAAAGCCAGTGGAGCCTCTCAATTAGTGGT TAAGGACTTGCAAGAGGAATTTGTTAAAGATTACATATTCCCTTGCCTGCGTGCTGGTGCCACTTATGAGAGGAAGTATT TGCTTGGGACTGCGATGGCTCGCCCTGTAATTGCTAAGGTAACTTCTTGAAGTGTTCTATTTTATCTCACTTGGTAAAAC CATTTCTTCTATTGCTCTGTTAGCTCTTTGAGTGCTGTAGTCACTTTTCTTTTTCTCTTGATATATTGAAAAAAATCACT ATTCAATGATTATGGAACTTAGTTATATTATATATTTCCCCCCTTATATAAACATGTATTGATTCATACCTGCTGACGGA TAGGCCATGGTTGATGTTGCTAAAGAAGTCGGAGCTGACGCTGTCTCCCATGGGTGCACCGGGAAAGGAAATGATCAGGC ATGTCTTACTATTATTATGCTCACAATAAACATCATGTCAGTTATTCTATTCTGACACATTTATTTATGTATGAACATTT AGGTTCGATTTGAGCTGACGTTCTTTGCTCTAAACCCCAAGCTAAATGTTGTGGCTCCATGGAGGGAGTGGGATATTACA GGGAGAGAAGATGCTATTGAGTATGCTAAAAAGCATAATATTCCTGTCCCAGTGACAAAGAAATCCATATATAGCAGGGA TAGAAACCTGTGGCACCTTAGCCATGAGGTAGGCACTTTGGTTACACTCAGCTGTTTACTAAATGTTGATAACTGAGGGG TGTCATGTCGGCATCTGGAATCAAGACCCGATTCCTTTTGATTAATATGATCTATCTGTGCATGGTTCACTACTATAGGA ACTCCCACAATCCCACAGCCATATTCATCACAGGGCTGGATATTACTGTCATTGATACATGTCTGCCTATTTTATGTACC TTTTTTATGTGAAAACCCTCATTTTTATTCTCCAGAGATACAAGCACTATCACTTTAGTTCATAAAAGATTCTCAAAACT AATGAATGTCAGGTCTGGGGTTTCTGCCTTGTTATCAATTAGTTGTCAATTTAGTTCATCAATAATTCGAAATGTCATCG TTTGGGTCTTTTTATTATCCTCTGTTTGAAGGTTGTCGATGCTGACATAGCCCGTTATCTGCTTGTTTGGATGAACATAC ACGGGCTGTTACCTACTTGCCATATGCGTGTGGTCATTGGAAGGCCTTCTATCATAAAGTAACAGAAGGACCAAAATGGT GATATTTTAAATCTGTTATGAACAGCTAAATTGGTGAAAAATCTTCCAAGAACTAAAGTGATGGCACTTTAATCTTTTAA GAACAAAAATTGGATTTTACTGCAATTTCTTTCTAAAAGCATGACACAGATTCTTGAAAACAGTTTCGATTCATTCACAC CCAGTTTCTCTTCCATCTCATTTTTGCTGACCTTTTCTTCATATCTCTTTCTTGTGTTACTATTATGTCACCCATTACAT CTGCCACTTCTCTCTCTTCTATTCCTATATCTCTCTACAGCGGAGGTGGAATCGAGTGGTGAACACATGTTTTTTACTTG AAAGTACTTCAAGGAATCCTATAATTTGTTACTGGTCTTCAGGCCATGTGTGAACCCTCATTAGACGCACTAGATCACTT CTTTGCTGTAATGTTGGAAGTTGCTAATCTGTAGTTTGATCTAGGGTAATGCTTTATGCATTGTAGCTCTAAAAACTATA TTTTGGAAATTACCTATTACTTTTTCTCTAATATATATGCAACCTATGACACTGAAGGGTGATAAGTTGGAAGACCCAGC TAATGAGCCCCAAAAGGATATGTACATGATGTCTGTAGATCCTGAGGATGCTCCAGACAAGCCAGAGTAAGCTTCCTTCA GAACTTGTGATTTCACTTTATATATAACCTCCAATTTGTGGTTAAAAATGTTGTATTTCACATATTTTGGATTTTGTATT TTAAATTTATGAAAGCATTCGTGATGCCATGCAGATATGTGGAAATTGGGATAGAGGCAGGGCTTCCTGTTTCAGTCAAC GGGAAGAGGCTTTCGCCAGCGTCGTTACTAGCAGAGCTCAATGAGATTGGCGGAAGGCATGGAATTGGCCGGGTTGACAT GGTTGAGAATCGGCTCGTAGGTATGAAGAGCCGTGGAGTTTACGAAACTCCTGGCGGAACCATCCTGTTCGCTGCAGCAA GGGAGCTAGAGCTTCTGACGCTTGACCAAAAAGCAATACAAGTTAAAGATTCTCTAGCCCTTACGTATGCAGAGTTAGTG TATGCTGGCAGATGGTTTGATCCGCTTCGCGAGTCCTTGGATGCGTTTATGCAGGAGATCACAGCGACCACAACAGGTTC TGTGACTTTGAAACTGTACAAAGGTTCTGTTGGTGTAACCAGTAGGCAGAGCCCCTTTAGCCTGTACAGGGAAGACATTT CATCATTCGAGAACGGGGAGATATATGATCAAGCTGATGCTGCGGGCTTTATTCGGCTTTATGGTCTTCCCATGAGGGTT CGAGCAATGCTTAAGCAGGGTATCTAAGGTTGATTTCATTTCAAACTGTTTGGAAAAAAGGACTTGCTTTGTTGCACTAC ACAAATTTGCTTGTCAAGAACAAAGGTAGAGTGTAGCTAGAGTACCTTGGATTGTTAGTGGATCAGCTACGCCTTAATAA AAATGAATATAATATCATTCTGAATTTGAATTCAGATCTTCTTTCCTCTATTATTTATGTGTTTGTTTCTGCATTTTTTT TGATAAGCCAAG
CDS sequence (LotjaGi4g1v0223000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACAGTTGAAAGCACTCCCTGCATATCCATCCTCTGCTACTCCTCCTTCCCTGCATGCAACAGATCACCTTCTGCA TCATCAGTTCTGGAAGGCAAAGCCATCATCATTCAAACAGTTGGGACCAAGAGCTTGTGTTGGTGCTGGTAAACTTCAAG CTATAAAAGCAGTTCTGCGCAATGATACAGATGTAGAAATTTCTGAAACCAAGAAGGGTAGTGGGCTACGAGGCAAATTG AATAAGGTTGTTCTTGCTTACAGTGGTGGCTTAGACACATCGGTCATTGTGCCATGGCTGAGAGAGAATTACGGTTGTGA AGTCGTTTGCTTCACTGCTGATGTTGGCCAAGGACTAAAAGAGTTGGAAGGTTTAGAAGAGAAAGCCAAAGCCAGTGGAG CCTCTCAATTAGTGGTTAAGGACTTGCAAGAGGAATTTGTTAAAGATTACATATTCCCTTGCCTGCGTGCTGGTGCCACT TATGAGAGGAAGTATTTGCTTGGGACTGCGATGGCTCGCCCTGTAATTGCTAAGGCCATGGTTGATGTTGCTAAAGAAGT CGGAGCTGACGCTGTCTCCCATGGGTGCACCGGGAAAGGAAATGATCAGGTTCGATTTGAGCTGACGTTCTTTGCTCTAA ACCCCAAGCTAAATGTTGTGGCTCCATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCTATTGAGTATGCTAAAAAG CATAATATTCCTGTCCCAGTGACAAAGAAATCCATATATAGCAGGGATAGAAACCTGTGGCACCTTAGCCATGAGGGTGA TAAGTTGGAAGACCCAGCTAATGAGCCCCAAAAGGATATGTACATGATGTCTGTAGATCCTGAGGATGCTCCAGACAAGC CAGAATATGTGGAAATTGGGATAGAGGCAGGGCTTCCTGTTTCAGTCAACGGGAAGAGGCTTTCGCCAGCGTCGTTACTA GCAGAGCTCAATGAGATTGGCGGAAGGCATGGAATTGGCCGGGTTGACATGGTTGAGAATCGGCTCGTAGGTATGAAGAG CCGTGGAGTTTACGAAACTCCTGGCGGAACCATCCTGTTCGCTGCAGCAAGGGAGCTAGAGCTTCTGACGCTTGACCAAA AAGCAATACAAGTTAAAGATTCTCTAGCCCTTACGTATGCAGAGTTAGTGTATGCTGGCAGATGGTTTGATCCGCTTCGC GAGTCCTTGGATGCGTTTATGCAGGAGATCACAGCGACCACAACAGGTTCTGTGACTTTGAAACTGTACAAAGGTTCTGT TGGTGTAACCAGTAGGCAGAGCCCCTTTAGCCTGTACAGGGAAGACATTTCATCATTCGAGAACGGGGAGATATATGATC AAGCTGATGCTGCGGGCTTTATTCGGCTTTATGGTCTTCCCATGAGGGTTCGAGCAATGCTTAAGCAGGGTATCTAA
Protein sequence (LotjaGi4g1v0223000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQLKALPAYPSSATPPSLHATDHLLHHQFWKAKPSSFKQLGPRACVGAGKLQAIKAVLRNDTDVEISETKKGSGLRGKL NKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQGLKELEGLEEKAKASGASQLVVKDLQEEFVKDYIFPCLRAGAT YERKYLLGTAMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLNVVAPWREWDITGREDAIEYAKK HNIPVPVTKKSIYSRDRNLWHLSHEGDKLEDPANEPQKDMYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLL AELNEIGGRHGIGRVDMVENRLVGMKSRGVYETPGGTILFAAARELELLTLDQKAIQVKDSLALTYAELVYAGRWFDPLR ESLDAFMQEITATTTGSVTLKLYKGSVGVTSRQSPFSLYREDISSFENGEIYDQADAAGFIRLYGLPMRVRAMLKQGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 78 | 475 | 398 | 1.1E-200 | – | |
| PANTHER | 78 | 475 | 398 | 1.1E-200 | ||
| Hamap | 80 | 476 | 397 | 53.669 | ||
| SUPERFAMILY | 81 | 250 | 170 | 1.48E-47 | – | |
| Gene3D | 81 | 251 | 171 | 2.2E-72 | ||
| TIGRFAM | 82 | 473 | 392 | 1.7E-151 | ||
| CDD | 83 | 467 | 385 | 0.0 | ||
| Pfam | 84 | 470 | 387 | 4.0E-158 | ||
| ProSitePatterns | 86 | 94 | 9 | - | ||
| ProSitePatterns | 195 | 206 | 12 | - | ||
| SUPERFAMILY | 250 | 476 | 227 | 3.66E-90 | ||
| Gene3D | 253 | 477 | 225 | 2.3E-96 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Argininosuccinate synthase activity | Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Arginine biosynthetic process | The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid. |
Expression pattern of LotjaGi4g1v0223000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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