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LotjaGi4g1v0223300.3

Overview

Field Value
Gene ID LotjaGi4g1v0223300
Transcript ID LotjaGi4g1v0223300.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Adenylate kinase; TAIR: AT5G63400.1 adenylate kinase 1; Swiss-Prot: sp|Q08480|KAD4_ORYSJ Adenylate kinase 4; TrEMBL-Plants: tr|I3SRC9|I3SRC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0223300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:52847710..52852613) extracted from Lotus japonicus Gifu genome v1.2.

CCGGAAACGGCAATGGCGAACTCGAACTTGGAAGATGTTCCCTCTGTGGATCTCATGACCGAGCTTCTCCGGCGGCTGAA GTGCTCTTCCAAGCCTGACAAGCGTCTCATCCTCATTGGTCGGTAATCCCATCTATCTATTTTCATTTCGGATTTTGTTA GTCATGTTTTCGTTTTTTGAACTCTCTGCCAATTCAGATCCGAAATTTGGAATAAGCATGTTTGAAATGTTCGATGCGTT CGGAATTTTTTGTTTTGTTTTGTTTGCTGGTTTGGAATGTTGATGCGGTTTTTTTTAGGGTTCCTTCCTCTATGGTTACA CTAGGTGTTCAATTGTCTATGCTTTTTTGTATTTTGTGTTTTAGGGCTAACAATTTTGATTGTTGTTTTATTACGAGATT GCACTGAGAATTTTGAGTAGTGAGGGTGGAGATGCTGATACTGTAGTATGATTTGCTAGACTCTTTAGTTACTTGAGAAG AAATGGAACTGAATCTCTTTTTTTGGTTTGTTGTGTTATTTATGTGCACTTAGTTTTTTCTTCATCCTTTAAATCAGTAT GTGATGGATGAATGTTTTTTGAATTTGTGAAATTTAAGAGCATATGGTTCCTACCTTATGCTTTGAAGTTATTGCCTGAT GTTTTGAACCTCACGAGATGTGTCATCGAACAGTTTTTTATGGTGCTTATGAACTGATTAATACTTGTCATTTGAATATG ATTCTCTATGTTGGTGAATCTACATGCATCCATCTCTTTTGTTGGAAAGACATTTACAAGGATGTATTCTGTGGTGGTTT TTGTTGTATTATGATTTATATATAATTTGTACGGATTTTATTTTCTCATATTAATTTGCTTAAATAGGTATGTTATAGTC TATAAATTGTTATCACCATTTGTATTTGGAATTCAGAAATAAATTTCATATTTGTTTTTCTCTCTTTTCAAGTTGGTATC AAATAGCTCGGCTTTCACATCTAAAACCCTAGCCACCTTCATTGCGCCCAGCCTTAGGTTGATTTCATTACGACTCGCGT ATGGTTTTGCACCATCCATCTGTATTGATTTCTGCGTGCGACTCAGTGTTGTCTAATATCGGCCATGGTAGCACCATGGC GGAATTCCAGCCAGCCAACTTGGCCGGTATCCTGCCATCGGCCATCATTATTTGTCAATATGGCGGGTTTTTGGCTTTCT GCCATTATCTAAACTTGGTACAACTGCGACTGCTACTGCCTACTTCCTGTCCTTTGAGATTGCCTGGAAGAGACTTGTGG CGTCCCATACTGAATCATCCCCTCTAGACCAGCCCTTTCCAGTAGTGCCATCATCGGAATTATTTCCACATGCTTCCACG CACAGTTTTCATCTCTGGCGTGTGTAACTCATACGCTACCATGCCGACATCCACTCGCAATACCGCTACCCCAAAGTTTG TTGTCAGAACCTCTTCGTCCTGTTTTAGGGGTAGATTGTTCCACCATCTTTGTGTATTTTGGCTGCTGTTAGAAGCCTTA GATCAGTCCTTTTTGGTTGAAAGGGGGAAAGTAATAGCTAAAAATAGGGCAACAAAGAGCCAAGTGCGAATCAACCAACG AAGGTCTCTAACCATGACTGGTAAAAAAATCTAGCCTCTTACTCTTTAGTGCTTGTAGTGCTGAAGGTCTCTAGATTATT TACTCTGGTGCTATTGATCGCACGACACTCGTTCTCATATTTTCCATCTAAACACTTTAACCATTAAACACCACATCAAT GTAGCCAATGGATCCAATATCTCAATTATGATGTGATAGCATTCAACTCCATCATTCTCTACACTTTAATAATGTGCAGG GTCATTTTTCCACTCTCATTGTGTCTTTGATGATCTTTCCGCGAGGAAGGCGATTGGAGTTCCTGAGGAACAAAGCGGGT TATACTATTGCAACATGAGAAAGAAAGGGCAGTGCAAGATAGACGTTTTTCACTTTCAGTCACTGGACAAGTCCAAAGTC TTTGACATCGTTCCAAGTTCCAACTCCCAAATATGGCTTCAACATAAGCAGTCATCTTTGGCATCCTCCATTTAATTCCC TTAAATCTTTGATTCCTTTTTTGTTCACAAAGGTTTCTTGTGAGTCCTTTCATTGTGATGTATGTCAGTTTGACAAACAT CCACCTTTTTTCATTTAAGTTCTGTGCCTTTTGATCTTATCCACTCTGATGTGTAGGGACCTGCTTCTACATCTTAAGTC TCTGGTGCGAAGTGATTTATTTCCTTTATTGATGACTGTACTCGGGCTACCTGGGTATTCTTTATGGAATATAAGTCTGA GGTGTTTCAATTGTTTATTAATTTCTTCCGTATGATTCAAACATGATTTGTGTTCATGAGTTCACATGTGTTGACACTCC ACAACAAAATGGGAGTGCAGATTTGTACAGATTTTATTTCCTTCTATTTATTCCCTTAATTAGGAATGTTATTCTCTATA TATTGTAATCACCAATTATATTTTGAATTAAATTAATAAAATTCTGATTACTTTTCTCTCTTTTCAAGTGTTCTGTTTCT ATTTGGTTCCAATCAAGTACTGTTGATTCCATCTATGTGACTTTTTAACCGCTTTGTTATCATTAAGAACTGTAGTTTAG GTCAAAGCAGATGCTTTCTTATTGTGATGCATATTTTATTTGTTAGAAAAAATTTCCTCTCTTCCAGCACAATTAAGTTG CTTCATTGACCTTTCAATTTGAATCCAAAATTGAAAGATTTTCATTCTTATAATTTGATTGTAAATGGAAAGTTTCTTCT AGTATGGATCCTTCCTTTTTATGATGTTACTCTTTTAAAGAAACTGTGAAACACAACACTACATGTCTTCCCTAAACCTT CAAATCGAACCAGTATTCTGTGATGTGCTAAATGGTGAGTAGCTCTTAGGTTTATATTGTTCCTTTGTAAAGCACACAGA CTGCCATTTTAATTAAATATTTTATGATGTCATGTATGCGTTTTTGTAGTTTTCATGTAGGGTTATTGGTTAAGATATTT AACATTTATCTTTAACAATTGGCCAATATATATTTGAAAAATATTCAGAAATCCAAGTAGATTATAACTTGAAAAATGTT AATGCAGGCCCACCTGGATCTGGAAAAGGCACCCAGTCTCCAATCATAAAGGACGAGTACTGCTTATGCCACTTAGCTAC TGGTGATATGTTAAGAGCAGCTGTAGCAGCTAAAACCCCTCTTGGCATTAAGGCTAAAGAAGCTATGGAAAAGGTGAGGT CTTTTTACATACTTACAGAGAGTTTATTGTTTTACTGTATACTTCCATAAAAAAATTGCTAATGTAATTATGTTATGATT TTCCAGGGAGAACTTGTTTCTGATGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAGAAGCCATCTTGTCAGAAAGG TTTCATTCTAGATGGTTTTCCTAGAACTGTGGTCCAAGCTCAGAAGGTATTTACATTCTTTGACAGCTGTGCTACTCAGC GAGCTTCGTTTTTTAAATATTGGGATTGTGTGTGTATGTCTGCATGAAAACAGAATTACCTGATTGTGTCATTGTTTTTT GCCGCTGTTCTTCCACTGCTATGAACTTGCCTTTTCTTTCTTTGCAGCTTGATGAGATGCTGGGAAAACAGGGACTTAAA GTTGATAAGGTGCTCAATTTTGCGATTGATGATGCAATCCTTGAGGAGAGAATTACTGGTCGCTGGATACATCCATCCAG TGGAAGAACCTACCATACAAAATTTGCTCCTCCTAAGGCCCCTGGCGTTGATGATGTAAGTCTGCATCTTTATTTTAAAC CCTGCCAAATGTTAGTTGCCTAAGCATGAGCTTTATTTATAGGGATGAGGTTTCTTTAAAAGCTTTAGGTGTCATTATGA CTTGAATTTTAATGCTGAGTATAATGAGGCGCCACACTTTATCAAAATATTTTATTGGGAAATGAATTTGGTTTTGAGGG CACTGCTGCTTTTAGTTGCTGGCCGTACCCACAGTTACTACAAATTTGTTTATTTCCTTCCTTTTTGTGGGTTGGGTTAA TAGAAAGTTCAGGGCAAATGTATGTTGTCCCATTTTCAAGGACAGGCCACGCTATTTAAGCTTAGGAAGCACTGGCCTTG TTCCCACTTTCATTGTCAATCTTGTTTTCCTCAGGTTAGTGGTGAACCTCTGATCCAGCGCAAGGATGACACTGCAGCTG TTCTTAAGTCAAGACTGGAGGCATTTCATAAGCAAACTGAACCGGTATGTTCTGAATCCTTTTTTTAAACTCAAGTAAGT GTTTGGATTGAACTCAATTTTCATTGGAAAAAATCACTTTTGGATGGGTTATATAGATGTTTGGAAATCATCAGAATTAT TTTAGCCTCAATCAATTTTGTGGGAAAGCTAGAGAGAGTTGCTTTTACGGTGGACATAAGCATTTGTCGAATTTCACAAT TCTACCTTACAAAAATCATTGTTCTCATAAATGTATCTAAGCATAAACCACTGCATCTTTAAATCACTATTACAATAATC AATTTAAACAAATTCTATTCAAAGTCAATTATGACAAGCTGATACAAACACGCTGAAACTTTGATGGTGTCCTGTAGCTG TCAGAAAATTTCTATTTGTCTATGTCCCTTGATAACGTTATGCAATAGATTATGCTTTATGGATAGTTGATTCGAATTAT CTCCTATTTATCTGGCTTTTTAGAATATTTCTTGCTACTTCCTTTTATGGTCTCCAATGAAATTTATGCATTGAACATGC AGGTTATTGATTACTATTCAAAGCAGAGTTTGGTTGCTAATCTTCATGCTGAGAAGCCTCCCAAAGAGGTGACAGTTGAA GTCGAGAAAGTGTTGTCTCAATAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0223300.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGAACTCGAACTTGGAAGATGTTCCCTCTGTGGATCTCATGACCGAGCTTCTCCGGCGGCTGAAGTGCTCTTCCAA GCCTGACAAGCGTCTCATCCTCATTGGCCCACCTGGATCTGGAAAAGGCACCCAGTCTCCAATCATAAAGGACGAGTACT GCTTATGCCACTTAGCTACTGGTGATATGTTAAGAGCAGCTGTAGCAGCTAAAACCCCTCTTGGCATTAAGGCTAAAGAA GCTATGGAAAAGGGAGAACTTGTTTCTGATGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAGAAGCCATCTTGTCA GAAAGGTTTCATTCTAGATGGTTTTCCTAGAACTGTGGTCCAAGCTCAGAAGCTTGATGAGATGCTGGGAAAACAGGGAC TTAAAGTTGATAAGGTGCTCAATTTTGCGATTGATGATGCAATCCTTGAGGAGAGAATTACTGGTCGCTGGATACATCCA TCCAGTGGAAGAACCTACCATACAAAATTTGCTCCTCCTAAGGCCCCTGGCGTTGATGATGTTAGTGGTGAACCTCTGAT CCAGCGCAAGGATGACACTGCAGCTGTTCTTAAGTCAAGACTGGAGGCATTTCATAAGCAAACTGAACCGAGTTTGGTTG CTAATCTTCATGCTGAGAAGCCTCCCAAAGAGGTGACAGTTGAAGTCGAGAAAGTGTTGTCTCAATAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0223300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANSNLEDVPSVDLMTELLRRLKCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKE AMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLGKQGLKVDKVLNFAIDDAILEERITGRWIHP SSGRTYHTKFAPPKAPGVDDVSGEPLIQRKDDTAAVLKSRLEAFHKQTEPSLVANLHAEKPPKEVTVEVEKVLSQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23359
1 234 234 6.6E-141
IPR000850
PANTHER
PTHR23359:SF168
1 234 234 6.6E-141 –
Gene3D
G3DSA:3.40.50.300
2 234 233 4.7E-78 –
Hamap
MF_00235
30 234 205 46.736
IPR000850
SUPERFAMILY
SSF52540
30 211 182 4.89E-36
IPR027417
TIGRFAM
TIGR01351
31 211 181 2.2E-68
IPR006259
CDD
cd01428
31 225 195 3.09841E-87
IPR000850
PRINTS
PR00094
33 46 14 4.9E-27
IPR000850
Pfam
PF00406
34 210 177 9.4E-54 –
PRINTS
PR00094
61 75 15 4.9E-27
IPR000850
PRINTS
PR00094
110 126 17 4.9E-27
IPR000850
ProSitePatterns
PS00113
110 121 12 -
IPR033690
Pfam
PF05191
156 191 36 2.7E-16
IPR007862
PRINTS
PR00094
189 204 16 4.9E-27
IPR000850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004017
Molecular function Adenylate kinase activity Catalysis of the reaction: ATP + AMP = 2 ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006139
Biological process Nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Subterm of
GO:0016776
Molecular function Phosphotransferase activity, phosphate group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).
Subterm of
GO:0019205
Molecular function Nucleobase-containing compound kinase activity Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0223300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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