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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0232500 |
| Transcript ID | LotjaGi4g1v0232500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate translocator; TAIR: AT5G33320.1 Glucose-6-phosphate/phosphate translocator-like protein; Swiss-Prot: sp|Q8RXN3|PPT1_ARATH Phosphoenolpyruvate/phosphate translocator 1, chloroplastic; TrEMBL-Plants: tr|A0A067K4L9|A0A067K4L9_JATCU Uncharacterized protein; Found in the gene: LotjaGi4g1v0232500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:54373706..54377457) extracted from Lotus japonicus Gifu genome v1.2.
CTCCCTCCCTCCCTCCCACCAAAACCAGACACGGCCTTTCCGATCTCCCTCGAAAATGCAGAGCGCGGTGGTTTTACCTC TCTCCCATTCCCTCTCCGTCCACAAAACTCGAACCCGCTTCCTCACTTCCCATTTTCCCATTCCTTCTTCCATTCCCAAC CTCAATGCATCTTCCTCCTCCTCTTCCTTTCCGCGTTTCGCTTCTTCCAAATGGACAGCGACACCCTCCGCCTCCACCTT CCGAATCAACGCAACCGCCAGCACCACCACCGCCTCCTCCTCCTCCGATAACAGCAGCAGCGGAAGCGGTAGTTTGTTGA AAACTCTGGAGCTGGGAGCCTTGTTTAGCCTATGGATCATCTTCAACATCTATTTCAACATTTACAACAAACAGGTCACA ACACAACAAAACTCCTCCATCAAATTCAATCCCTAAACCTAACATTTTCAACCTCTCTTTCCCAATTTCAATTTCACTCT GTTTTCATTCTGTTTTTCCACAGGTTTTACAAGTTTACCATTTCCCTGCAACTCTAACTGCTATTCAATTCGCTGTGGGG ACTCTCATTGTTTTCTTCATGTGGATTTTCAATCTCTACAAGAGGCCCAAAATTAGTGCAGCCCAGGTAGGTATTCATAT TCCCATTCTTTCTTCCTGCAATGGAGTGTTACTGTTCCATACTTCCATTTGCTCTGTTTCTGTTCTGTTTGTAATTCATT GTTTATTGTCTTGCAGCTAGCAGCAATAGTTCCACTGGCTCTGGTTCATACTTTGGGGAACCTTTTCACTAACATGAGTC TCGGAAAAGTCGCCGTGTCTTTCACTCACACCATCAAAGCTATGGAGCCTTTCTTTTCAGTCATCCTCTCTGCTATGTTC CTTGGAGAGGTAAAAATCAATAAGAATACCATTATATGTTGTTGCAGCCAAACCTGGATGAGTAATGATAGCAATGTTTG AATAGACATGGTATCACAATCTCTAGGATCAAGTAATATGAGTTTGATTCTTGATACCCCATTATTCTAGATAGGCAATT ATTCTAGTCAAAAGTGAGTTTCAGGATAAGGCATCGTTCATGTTTCAATTTCAATAGTTTTCGACATGAAAATGTTTATT AGGAATATAATATAAAACTATTCATTTATCTTTACTCCACTGTTTAAGTGTGTGTTTGTATTGCGTTCAATACCACGTTC ACTCGAATTGCACAAGTGACATAAGTTGACCAGAAGGCACATTCACGTTGCCGTGGTCTGTGCGCGTTGATAGAAATACA AGCACACTCATGTCGAGATAGTTGTTTCATGTTATTTTCTCATAAGTATACACCAATTGTGTGTAGATGATCATGTAAAA AATAATGTGTTGCTACTTACTTATATAGCTGGAGCTGCTTTTGCCCCATTTCTATGTGGTTACTCTTGTTTCATTTTTGT GATCAGTTTAATGCTAGTTAATGGTTATATTTCTCACTCTGTAGTGGATACATGTGTATGGTAAGCGTTACCATTGAAGA AAATAAGAAATCAACATTGTTGCGTCAACGTTTAACACAGTCTCATTATTGATTTTTCCAATCTAAATTCGTTGTTTAAC TTTCTTAATTACAGATGCCTACAGCATGGGTGGTTGCTTCCCTTGTGCCTGTTGTTGGTGGGGTGGGGCTGGCGTCTTTT ACAGAGGCCTCCTTCAATTGGTAAGATCTCTAGCATGTTCATTTCTTCTAGGAGAAGAGAATAGAAGAAACGGGAACAAT TTTAAAAAGAAACAGTCTAAATATATGGCTATTTTCTGGAATATTGAATAGGGCTGGGTTTTGGAGTGCAATGGCTTCCA ATTTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTCAAGAAGGAGGTGATATGACCTATGAACCAGTCA CATACTCGCATAGTATTGCATTTAGTTTCTTGTTCATAATAACTTCTCATATACAAAGTAAGAGTAGCATGTTATGACAC TCTTATCTTATATTTCATCTTTTTAAAAAAAATCATTTTGTTCTTCTCAGGAACAGGAACCCATAGACAACATAACCCTC TTCTCAATAATTACAGTTTTGTCATTCTTGTTATCAGCACCTGTAACCATCTTCATGGAGGGTGTCAAATTTACCCCTGC TTACCTTCAATCCGCGGTGAGTAACTAAGTATCTTGATGGTTGAATTAGAGAGGGTTGCTGTTAACATTCTCCTAATAAA AATATTTATAATTGTTGAAGCTACTAATCTTTCATCGCATCATTTTTCTTGACAGGGATTAAATGTTCAACAAGTGTACA CCAGAATTCTTATTGCTGCACTATGTTTCCATGTATATCAGCAAGTGAGTTTTTTTACCAATTCCATTCACAATTACCCC CCTCTTATTAAAGAGTAATTCATCTAATTCCCTTATCCTTTTAATTAAACATCAGTATTTGCTACTTATGAAAAACAAAA AACAGACTGTTTGATTTGAATTATGAAATGATATGTGACATTTTAGATTAATGGGTAGATACTAGATACCCATCAATCTC TACCCATTTTATGGTGTAGTGGTTTACAGAACCAAAACCTCTATTGTGATGGTTTGGTTAAGATTCATTTTGAAATTCAG AGAGTCTGTCAATTATGCTATGTGTTAGTTTTTTTGCTTGTGTTCTATGTCATACCAGTTGAGAAGGGTAGAACGTGCTT CTGACCATTTTAATGGAATTAGAAAAGATGTAGCTAATTTCATCTCGAGAATTGTGTGCTTGCTTGTCTAAAATGCTGAG GCTAAATAAAAATGGTAATGGGATCTTTTTGATATAAGACCATAAAAACTGGAAAAGCGAAGGCAAATTAAGCTATAAAT AGGGATTCTACCCATTGTTACTAACTAGAAGAAGCTTAAGTAAAATATTAGTTTTTATCTTAAATCATATAATGTTTTTT TGCATGGGTCTGTTCTATAACTAGTTTTGTACTCCACAATAATGTAAAGATAATTTTCTTGTAGGTTGCTTATATGATAC TGCAGAGAGTATCACCTGTCACCCACTCTGTGGCAAACTGTATGAAGCGTGTGGTGGTCATCGTCAGCGCTGTCATCTTC TTCCAAACACCTGTCTCACCAATTAACGCATTTGGTAAAATTTGCTTCTTTCTGATTCCATCTGGAACCATTTTAAGAAC ATTGTTTTGATGTTTTTTTAACCATATTCCTGCATAACTCTTGCTGAGATTTCATGTTTTGTTCCTCTGCAGGGACTGCT ATAGCTCTTGCTGGTGTTTTCCTCTATTCCAGGGTGAAGCAAATTAAGCCCAAGACGGCTTGATTATCAAATTTTGCATC TTGCATAACATACCCCGTATGTGTGAATTTCTTTATAGGTCAGATAGGGATTGACTATTGAGGTTACCGATCTTAACCCC TTTTTAGGATTGAAATATTTTATACCCAAAATGGTGTCTCAATTTCATTGTCTAGCTTAGAGGCGCCTAATGGTTTGGCT CTATGAAAAAAATATCATCATCTAGTGTATTTTTTACTTTTTTTATCACATTATCTAGTTGTTTTTAATGTAAATTCATT TAATAAATCTTGGCAAGATTCACAGCTGTAAATGTCTTATAAGTTGAGAATTACTGTGTAATATTACCTATCCAATCTGT CAAAAAAAAAAACAATATTACCTATCCAATATTTATTTTTAATGTTTACATTCGCAGTCACTCGAACATGAG
CDS sequence (LotjaGi4g1v0232500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAGCGCGGTGGTTTTACCTCTCTCCCATTCCCTCTCCGTCCACAAAACTCGAACCCGCTTCCTCACTTCCCATTT TCCCATTCCTTCTTCCATTCCCAACCTCAATGCATCTTCCTCCTCCTCTTCCTTTCCGCGTTTCGCTTCTTCCAAATGGA CAGCGACACCCTCCGCCTCCACCTTCCGAATCAACGCAACCGCCAGCACCACCACCGCCTCCTCCTCCTCCGATAACAGC AGCAGCGGAAGCGGTAGTTTGTTGAAAACTCTGGAGCTGGGAGCCTTGTTTAGCCTATGGATCATCTTCAACATCTATTT CAACATTTACAACAAACAGGTTTTACAAGTTTACCATTTCCCTGCAACTCTAACTGCTATTCAATTCGCTGTGGGGACTC TCATTGTTTTCTTCATGTGGATTTTCAATCTCTACAAGAGGCCCAAAATTAGTGCAGCCCAGCTAGCAGCAATAGTTCCA CTGGCTCTGGTTCATACTTTGGGGAACCTTTTCACTAACATGAGTCTCGGAAAAGTCGCCGTGTCTTTCACTCACACCAT CAAAGCTATGGAGCCTTTCTTTTCAGTCATCCTCTCTGCTATGTTCCTTGGAGAGATGCCTACAGCATGGGTGGTTGCTT CCCTTGTGCCTGTTGTTGGTGGGGTGGGGCTGGCGTCTTTTACAGAGGCCTCCTTCAATTGGGCTGGGTTTTGGAGTGCA ATGGCTTCCAATTTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTCAAGAAGGAGGAACAGGAACCCAT AGACAACATAACCCTCTTCTCAATAATTACAGTTTTGTCATTCTTGTTATCAGCACCTGTAACCATCTTCATGGAGGGTG TCAAATTTACCCCTGCTTACCTTCAATCCGCGGGATTAAATGTTCAACAAGTGTACACCAGAATTCTTATTGCTGCACTA TGTTTCCATGTATATCAGCAAGTTGCTTATATGATACTGCAGAGAGTATCACCTGTCACCCACTCTGTGGCAAACTGTAT GAAGCGTGTGGTGGTCATCGTCAGCGCTGTCATCTTCTTCCAAACACCTGTCTCACCAATTAACGCATTTGGGACTGCTA TAGCTCTTGCTGGTGTTTTCCTCTATTCCAGGGTGAAGCAAATTAAGCCCAAGACGGCTTGA
Protein sequence (LotjaGi4g1v0232500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSAVVLPLSHSLSVHKTRTRFLTSHFPIPSSIPNLNASSSSSSFPRFASSKWTATPSASTFRINATASTTTASSSSDNS SSGSGSLLKTLELGALFSLWIIFNIYFNIYNKQVLQVYHFPATLTAIQFAVGTLIVFFMWIFNLYKRPKISAAQLAAIVP LALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEMPTAWVVASLVPVVGGVGLASFTEASFNWAGFWSA MASNLSNQSRNVLSKKLMVKKEEQEPIDNITLFSIITVLSFLLSAPVTIFMEGVKFTPAYLQSAGLNVQQVYTRILIAAL CFHVYQQVAYMILQRVSPVTHSVANCMKRVVVIVSAVIFFQTPVSPINAFGTAIALAGVFLYSRVKQIKPKTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 92 | 92 | - | – | |
| PANTHER | 50 | 392 | 343 | 1.0E-184 | – | |
| PANTHER | 50 | 392 | 343 | 1.0E-184 | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| TIGRFAM | 91 | 391 | 301 | 2.2E-117 | ||
| Pfam | 92 | 383 | 292 | 7.5E-120 | ||
| Phobius | 93 | 110 | 18 | - | – | |
| Phobius | 111 | 121 | 11 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 122 | 145 | 24 | - | – | |
| SUPERFAMILY | 136 | 228 | 93 | 3.66E-8 | – | |
| Phobius | 146 | 150 | 5 | - | – | |
| Phobius | 151 | 172 | 22 | - | – | |
| TMHMM | 152 | 171 | 20 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 193 | 219 | 27 | - | – | |
| TMHMM | 218 | 240 | 23 | - | – | |
| Phobius | 220 | 230 | 11 | - | – | |
| Phobius | 231 | 249 | 19 | - | – | |
| Phobius | 250 | 269 | 20 | - | – | |
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 270 | 291 | 22 | - | – | |
| Phobius | 292 | 310 | 19 | - | – | |
| SUPERFAMILY | 307 | 385 | 79 | 1.57E-6 | – | |
| Phobius | 311 | 333 | 23 | - | – | |
| TMHMM | 311 | 333 | 23 | - | – | |
| Phobius | 334 | 344 | 11 | - | – | |
| Phobius | 345 | 361 | 17 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 362 | 366 | 5 | - | – | |
| Phobius | 367 | 385 | 19 | - | – | |
| Phobius | 386 | 393 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0232500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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