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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0244900 |
| Transcript ID | LotjaGi4g1v0244900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase; TAIR: AT1G18890.1 calcium-dependent protein kinase 1; Swiss-Prot: sp|Q9M9V8|CDPKA_ARATH Calcium-dependent protein kinase 10; TrEMBL-Plants: tr|A0A072V1D7|A0A072V1D7_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi4g1v0244900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59652880..59656676) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAAACTGCAACGCGTGCGTGAGACCAGAGTCGGTAGAATCGAACCGGACGGCAAGCGAGTCGAACCGGGGGCGGAG GAGGAAAACCAAACCGAACCCATACTCAGAGTTGGGTGTGGGTGCGGTGGGAGGAACCGAGGCAACGATCCGGGTCCTGA AGGATGCGAACCCGCGGAGCCGAATCTGCGACAAGTATGTTCTCGGTCGGGAGCTTGGTCGGGGCGAGTTCGGCATAACC TACCTCTGTACAGACAAGGAAACGAAGCAGGAGCTGGCGTGTAAGACCATCTCGAAGCGGAAGCTGAGGACGGCGGTGGA CGTGGAGGATATCCGGCGAGAGGCGGAGATCATGTCCACGCTGCCGGACCACCCCAACGTGGTGAAGCTCAGGGCTACCT ACGAGGATGATGAGAATGTTCACCTTGTTATGGAGCTCTGCGGCGGAGGAGAGCTTTTCGACCGGATTGTTGCACGGGGG CATTACAGCGAGAGGGCGGCTGCACACGTGGCGAGGACTGTTGCGGAGGTTGTCAGAATGTGCCATGCCAATGGGGTTAT GCATAGAGACCTTAAGCCTGAGAATTTTCTCTTTGCTAATAAGAAAGAGAATTCAGCTCTTAAAGCTATTGATTTTGGAC TGTCTGTGTTTTTTAAACCTGGTGTGAAATGTGGCTAGCTTTCTATTTTGGTCTTGTTTTGTTTTAGTTTGATGAATTGT GCTTAATGCTTATGATAGTTTTTTGGTTTAATTGATGATAGGGGAGAGGTTTTCAGAGATTGTGGGGAGTCCTTACTATA TGGCACCTGAGGTATTGAAGAGGAATTATGGACCTGAGATTGATATTTGGAGTGCTGGTGTGATTCTTTATATCTTGTTA TGTGGGGTGCCTCCGTTTTGGGCAGGTACTATACTGGTGGTTTGTGTTTGGTGATTGTGGAGTGTTTGGACTTTGGTGTG ATTTTTGTATTGGTTTATTGCAGAGACTGAACAAGGGGTTGCTTTGGCGATTTTGAGAGGGGTTATTGACTTCAAGAGGG AGCCTTGGCCTCAGATTTCGGATAGCGCCAAAAGCCTTGTGCGGCAGATGTTGGAACAGGATCCTAAGAAGCGCTTAACG GCTGAACAGGTGCTTGGTAAGTGGTTTGCCCGCATTAGGATTGTGTATGCTGACTAGTGACTTGGTGCTGAATTTAGTAC GTGATGAAAATTTTATGTTTAGGTTACTGTTATTCTCTCTATCTTATAGAAATAGTAGTAAACACTGAGAAAAAGTGAAT TCATGGGTTTATTGGATATTGGGCAGTTCCTGTGTTAGTCTCCATCTTGCTTAATGGTATGTGTGATCTGAGGTGGTGAT CCATTTTAACGCTTAAACTATTTTCCTTCTATGAGGTCAACTTTCAAACAATAGTTTTAGTAACTGTAAAAATGCTGCAT TTGATTTGTCCTTCATAATAGAAGCTCACATGTATTTTAAAAGGAATGTTATCCTTCTCACTGGACCGTTTGCCCCATTG CCCTCTCCCCTCTTAAAAGAAAAGTAAAACTGTTGCGTATTTGAACCCTCACAACTACGTGATATCGAAAGTTATTCTAA ATATGCACGTTTGTTTATTATGGTTGCAGAACATTCCTGGCTACAAATTGCAAAAAAAGCTTCAAATGTACCATTAGGAG ATATTGTGAGGGCAAGGCTTAGGCAGTTCTCAGTAATGAATAGATTCAAAAAGAGAGCTCTTCGGGTTAGCATCTATTGT CGTTGATTAATGATAATTGAGTTGAGTTCAGTTTTTTATTGAAGCAGTATGGAAGTTGAAACGTTGGTGATTTGTGTTTC TTTGAATAAATGCCACAGGTAATTGCGGAACATTTATCCGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACCTTGAT GGATACTGACAAAGATGGCAGAGTATCATATGAGGAGCTGAAGGCTGGTTTGCAGAAGGTTGGTTCAAAATTGGCTGAGC CAGAGATAAAGTTGCTGATGGACGTGGTAGGCTTTCTCTAAACTTCATTCCATTTATAATGTAATTGATCAATATAATTT TAGTTCTTTGATTTTCACCATGATTATTTTTCAATTTGATGGAGCTCTTCGAAAAAACACTCTTTTTTGGAGATCTGTTG CTTGATTTCTTAGAAGAGTGCGCATTTTGCACCATTATAATGAACATGATGTTGTGCTTTCAAGGGATGGAGATTTTCTC TTTCCTACTTAACCTGATGTGTGCCTGATTTCCTGGTCTATATGTGTAGGAAAAATGTGTCTTATAGCATGTTTGGATTC ACGTTCAGATCTTTCAGAATCAATTCTGCTACCACACTAGGAGTAGCTTCTCCGAGAATCAATTCTCCTTTTAATGTGAA AATCTATTGTGTACCCAAACATGCACATAATTGGTTTTGGATCTTGTGTCGCATCACATCACATAATGATAAAGGCCAAT TACAATGCGCGTATATTGTCAATATTGCCTGATATACTTATGGAGACTTTGTTTTACCATTATATTTGCTATTCAAAAAT TACTTCTGAAACTTGTTAGTTTGAGTATGAAGGTTGTTTTAGTTTATCCTTAGATTGAAGAAAATGTTCAGAGACTGAAT CATGAAAAAACAAACCCTGATTTGTTGTTATTGAGTTGATGAAATCCATTGTCCTTCGATATTCTATTTATACTACTGAG CAATATGGTAGTACATGTTAAAGTATCTCTATTTCTCAATTATAAACAGTACCAGTTTACTAGACTCAAACTCACATTGG TCTAAAGCTGATGCAACCTCTCACTTCTATTGAACTATACTCCTCCACATACTCCCTTTTTTTGTTTGAAATGTGCTTCA TCTATTTGAAAGGAGCATAAATTGAATTTCCACTCATGCCCCAAGCCTAGACTTGTCAAGTATGCAAGTGTCATGATAAA TTTGTGATTCAAATCTCTGTTATTAATTGCTTAGGCTGATGTTGACGGGAATGGAGTACTTGACTATGGAGAGTTTGTAG CTGTGACGATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAGCATTCATGTTTTTTGACAAAGATGAGAGC GGTTATATTGAGTTAGGTGAGCTAGAGGAAGCCTTGGCAGAGGATTCAGGAGAAACTGATACTGATGTATTGAATGATAT CATGCGTGAAGTTGACACTGACAAGGTTTTGCTTTCATGCTCATGACTCATTCTTTAATTTTCCTTTGTGCTCGTTCTTT CTTTAGTTACACTGCTATTGTAACATAAACAAAAGCATATATGTTAGTGTTTCTCGCAAAACTTGATTATTCAGATGGTA ATAACTAATAACCATGTGAGGAGTGAAGATGTGGATTTTCAGCTTAATTCTCATGTTACATCTCATATACACATTCTCCA CAAGTTTTAAAAACATTTTTCAATTTTCTCTCCCAGGACGGTCGCATCAGTTATGAGGAGTTTGTGGTAATGATGAAAGC TGGAACTGACTGGAGAAAAGCATCTAGACAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCATAAATTTGATGAAGGACG GCTCGCTTCAGCTTCATGATGGGATTAGTGGCCAAGCTATTGTGGTTTGAGTACAAAGTTTTTTTTTTCTTTCTGTAACC TTTGTGCTCACCCAGCTTCGCTTTTCCTTTCACCACTTGCTGTTCTTGAAAGTATGGTTTGTGTAATCTCTTCGTGAAAG CAAGCAAGTTTTAGGTTAAAGCGTTTTGAAGTGCTGA
CDS sequence (LotjaGi4g1v0244900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCTGAGGTATTGAAGAGGAATTATGGACCTGAGATTGATATTTGGAGTGCTGGTGTGATTCTTTATATCTTGTT ATGTGGGGTGCCTCCGTTTTGGGCAGAGACTGAACAAGGGGTTGCTTTGGCGATTTTGAGAGGGGTTATTGACTTCAAGA GGGAGCCTTGGCCTCAGATTTCGGATAGCGCCAAAAGCCTTGTGCGGCAGATGTTGGAACAGGATCCTAAGAAGCGCTTA ACGGCTGAACAGGTGCTTGAACATTCCTGGCTACAAATTGCAAAAAAAGCTTCAAATGTACCATTAGGAGATATTGTGAG GGCAAGGCTTAGGCAGTTCTCAGTAATGAATAGATTCAAAAAGAGAGCTCTTCGGGTAATTGCGGAACATTTATCCGTTG AAGAGGTAGAAATAATCAAAGATATGTTTACCTTGATGGATACTGACAAAGATGGCAGAGTATCATATGAGGAGCTGAAG GCTGGTTTGCAGAAGGTTGGTTCAAAATTGGCTGAGCCAGAGATAAAGTTGCTGATGGACGTGGCTGATGTTGACGGGAA TGGAGTACTTGACTATGGAGAGTTTGTAGCTGTGACGATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAG CATTCATGTTTTTTGACAAAGATGAGAGCGGTTATATTGAGTTAGGTGAGCTAGAGGAAGCCTTGGCAGAGGATTCAGGA GAAACTGATACTGATGTATTGAATGATATCATGCGTGAAGTTGACACTGACAAGGACGGTCGCATCAGTTATGAGGAGTT TGTGGTAATGATGAAAGCTGGAACTGACTGGAGAAAAGCATCTAGACAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCA TAAATTTGATGAAGGACGGCTCGCTTCAGCTTCATGATGGGATTAGTGGCCAAGCTATTGTGTGCTGA
Protein sequence (LotjaGi4g1v0244900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEQDPKKRL TAEQVLEHSWLQIAKKASNVPLGDIVRARLRQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVSYEELK AGLQKVGSKLAEPEIKLLMDVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFMFFDKDESGYIELGELEEALAEDSG ETDTDVLNDIMREVDTDKDGRISYEEFVVMMKAGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDGISGQAIVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 296 | 296 | 1.5E-189 | – | |
| SUPERFAMILY | 1 | 92 | 92 | 1.28E-27 | ||
| Pfam | 1 | 91 | 91 | 2.4E-22 | ||
| SMART | 1 | 91 | 91 | 0.0078 | ||
| ProSiteProfiles | 1 | 91 | 91 | 18.634 | ||
| Gene3D | 1 | 96 | 96 | 8.8E-85 | – | |
| PANTHER | 1 | 296 | 296 | 1.5E-189 | – | |
| Gene3D | 97 | 270 | 174 | 8.8E-85 | – | |
| SUPERFAMILY | 119 | 298 | 180 | 1.92E-44 | ||
| ProSiteProfiles | 134 | 169 | 36 | 15.657 | ||
| SMART | 138 | 166 | 29 | 1.7E-6 | ||
| Pfam | 139 | 198 | 60 | 2.9E-11 | ||
| ProSitePatterns | 147 | 159 | 13 | - | ||
| ProSiteProfiles | 170 | 205 | 36 | 10.385 | ||
| SMART | 174 | 202 | 29 | 0.02 | ||
| ProSitePatterns | 183 | 195 | 13 | - | ||
| ProSiteProfiles | 206 | 241 | 36 | 12.533 | ||
| Pfam | 209 | 272 | 64 | 7.8E-13 | ||
| SMART | 210 | 238 | 29 | 0.022 | ||
| ProSitePatterns | 219 | 231 | 13 | - | ||
| ProSiteProfiles | 242 | 277 | 36 | 14.29 | ||
| SMART | 246 | 274 | 29 | 2.8E-7 | ||
| ProSitePatterns | 255 | 267 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0244900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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