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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0246400 |
| Transcript ID | LotjaGi4g1v0246400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.2; TAIR: AT1G69850.1 nitrate transporter 1:2; Swiss-Prot: sp|Q8H157|PTR19_ARATH Protein NRT1/ PTR FAMILY 4.6; TrEMBL-Plants: tr|I1JZS8|I1JZS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0246400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59800766..59805658) extracted from Lotus japonicus Gifu genome v1.2.
CTCCACTATAAATGCAAGTTCTGTTTATCACTTCTCCCATAAGATAGAAAGTGCTCTTAATCAAGTATTCTACTTCCAGC ATTCCAATTCCTCCCCATCTAAATTCAAGAATAAGAGATAAATAAGTTGATGGTAACATTTTACTTCATAATTTCTAGTG TAATGCTACTTTAATGTGTTTGTTTTAATTCCTCAAATAAAACTGTTTTAGGAAGAAGGACAGGTGCAAGTTTGGGAAGG CTATGTAGATTGGAGGAACAGACCAGCCAAAAAAGGACATCATGGTGGCATGCTTGCTGCTTCCTTTGTTTTGGGTTAGT ACAACCTTAGACTCTGACCACATTATGCTCTTAATGTTTCTCTGATTTCCAAACCACAATGTTATATATGTTTCTGTAAA CCATTTTTTCTACAAAATTACTAGATATTAAGTATTGATGTGTTAACATGTTTCTAATTTTCTAACTACAGCTGTGGAGG TATTAGAGAACCTAGCATATCTTGCTAATGCAAGCAACCTTGTTTTGTACCTGACCAAGTTTATGCACTTTTCACCATCC ACCTCTTCCAACATTGTCACCAATTTCATGGGAACAGCTTTCCTCCTTGCTATTCTTGGTGGGTTTCTGGCTGATGCATT TTTCACCACTTATTCCATCTATCTCATAAGTGCTGCAATAGAATTCATGGTAACTTCTTTTCTTACTTAAGGTTTCTATA ATTTTCCCTCAAAGTGTTTAAGCTGCTATATTAACTTTGCAGGAAACAGCTTCAAGACTTCCAAATTAACTGGAATATAA TGTATAAGCTTAAATATCACGCACAAGTCAATGATAAAAAGTGAAAGGCTTAATAGCACTTTTGGTCCCCCACGAATGCA AAATGTGCAAATGGGGTCCCTAAACTTTAAAAATAGCATTTTTCCTCCCCGACGTTATCTTCCGTTAACAGTTTTGGTCC CCAGACAGTTTTCCGTCAAAAAACTAACGTTTTTAAGGAGAAATATGTAATTAAACAAAAAAATAAATTAAGAAGAATAA AAAGAAAAACCAGAAAATTCATCATCTCCATCTTCTTCCATCATCTTCACTATTTTCTCAATCATTAAACCCAAAACCCA GAAAATTAAAAACCTAAAAACCAAAATCATCTTATCCTCTTTTTCATCTCACAAACATCTTTATCTACTTGATCTTCATC TTCACTCAAAAAGAAAAATGGATACAGATCTATAACCCACCCCTAACCTTCATCTTCACCCTTGCACCCAGTTTTGGTCC TGCCATTGAACAACCAGATCTGAACCAAGATCTCTTCCCTCATCCTCCCCCAACACACATCCAACCAAAGCCCAAACGGA AATCGCCTCCCTCAACCTCCTCCAACCCAGATCGAACATTGATCTGGACACATAGGACACAGACAAATTCCTCTTTTTCA TCTCCTTTCTGAGTTTTCAATGGAAGGGATGAAGTGTGGTTTGATATCCTCTTGTCGTCCTCACAGGCACGATCTTTGCA ATTTGGATGGAATAAAGAAACATAAATCGAGAGAGAAAGCAAAAGTTTTTGGATTTATCTTCTGGGTATATATATATTTG TAATTTGTCCTTAGCAATATAATCTAGCTGGGTTTATGTCGAGAAGCAAAAGTTTAGTATCTAAAAGATTTTATCTTTTT AAATATTCTTAGGTTTTTTGGGCCATTATCTTCTTCTGGGTCTATATTTTCTTCTATATTTGGGTTTTATTGGTTTCCTT TGGGGCATTTAATTTCTGGATTCTCATTTGTTTTTACGGGCATTATTTTTTTGGTTTTGGAGAATTTTGAATTTCTGTAA AAAAAGATTGAAAAAGATGAAGAACTCCTTGATTTTTTCTGGAAAACCCAGAAACCGTTACTTTTTGAACGGAAAAAGGA CGGGGGACCAAAACTGTTGACAGAAGATAACGTCGGGGAGACAGAATGCTATTTTTAAAGTTTAGGGACCCAATTTGCAC ATTTTGCATTTATGGGGGACCAAAAGTGCTATTAAGCCAAAGTGAAAAAAAGATGCTACATTTACATAACATGTAATTTT CAATCACAGCCAAAGGGCAGGGAAGACTTTTTACAAATGTTTACCTATAGATTGTGCTTCTAGGTAGGAAATCACATCAG GACTTGATTATCTTGAAGGTTGATTCTAGAAGAACCGAACAATGTAGATGGTATGACCAAAAAAATATAGTCAAGAATCA AGATCTTGATATACTTCCAAAGTATAAACTATAATGCTGGCCCCACCTGATAGGGTCCTTTTTCAATTCTCAACTCAACT AAGAGAATAGTAAAAAGAAAAAGAAAAGACAGAAATGAAGAAAGATGAAAGAAGCATGATCATGGAGACATGGACTCATG GTGATAAGATTCCAGAACACAAATCCAGTCAGTGCTCTGGCTATTTACAATATCATATCACTAGTCTTCTGTGTAAACCG GTGAAACAGCTAGCTGCCATCACATATCATGTTATTCATGTGAGGATTTATCATTTATCAAACAAACATCAAAATCAGAC AACTTAGCTATAAAATAGGTTGAGTTCAATGACGTTCTCAAATTATTGACCTGCAATATGAAATAATTAGCCAGAAACAT TTCCATGCTGTTATCAAGATTATAAGTTCCATGTGAGATCACATGTTTTACACATAAACTACCCTATAATGAAACAGGGC CTATTAGTCCTTACAATACAAGCACACATGCCATCACTGAAACCACCAAACTGCCTTATGGGAGATTCCAGCAGTCACCT ATGTCAGAAACTTCATCAAGGGGAGGCAGTTATGCTCTTTGCAGGCCTCTATCTAGCAGCTCTCGGCGTAGGAGGAATAA AAGGATCACTTCCTCCTCATGGGGCTGAGCAGTTAGATGAGACCACCCTAGATGGAAGGAAAAAGAGGTCTGAATTTTTC AATTACTTTGTCTTCAGCCTCTCATGTGGGGCATTGATTGCAGTCACTTTTGTGGTGTGGATTGAAGACAACAAGGGATG GCAGTGGGGTTTAAGTGTCTCAACTGCATCAATATTGATCTCCATTCCAGTTTTCCTTCTTGGTTCACCAACATACAGGA CCAAGATTCCATCTGGAAGCCCCATCACATCCATGTTCAAGGTATACTTCAATGCATGTATGTTTGTTTGGAAACCCTAC TACAATTTTTTCTGAAGTAGAATCAATTATGGAGAAAAGCTTCTGAATTTCAGAAATGATTTAATAAAAAAACCTGATCC AAACATACTATAAAATTAGAATGGATAGTCAAAGATTTTACCTCTGGCAAGTTAGTGCCTACAAAAGGAAGTTCGAAAGT CCATCATTGTGTAAAACGTCAGTCAAATTAGTCCCAATAGATTGACATTTTAGTTGACTAAATCTGACCGACTTTTTACA CATTCATGCACTTTCAAACTTATTTCATTCTTTCAAGACCTAACTTGCCAACGGCTAAATCTTTCGACAAGTTGACCATT GAGTTTATAAACTTATATACATGGCAAGTTGACTAGTAAAAAAAGCTATACAAGCTGCTTTGAATTTTGTCAGGTTGTTG TTTCTGCAGTTTGCAACAACTTCAAATCAGGGAATTCAACCAATGCTGTCATAAACATGGCCACAAGTCCATCCCACACA ACTGAAATCGGTGGTGAAGTTGAAGAAAGTAACACTACAAAAGAGGATCAGCTAAGTCAAAGGACTCAAACCCCAACAGA AAGCCTTAAATTCCTTAATAAAGCAGTGATGGAACCAGTTCATCCTATGCTGCAGTGCACAGTAAAGGAAGTTGAAGAGG CCAAGGTAGTATTAAAGATCCTTCCCATATTCATGTCCACCATAATGCTTAACTGTTGCCTTGCTCAGCTATCAACCTTC TCAGTCCAACAATCAGCCACAATGGACACCATGCTTGGTTCCTTCAAGGTCCCACCAGCTTCTCTACCTGTGTTCCCTGT TCTCTTCATCATGATCCTTGCCCCACTCTACAACCATTCCATTGTCCCATTTGCAAGGAAAGTGACCAAAACTGAGATGG GCATAACACATCTACAGAGAATAGGGACAGGGCTATTTCTCTCTATTGTGGCAATGGCAGTGGCTGCTTTGGTGGAAACC AAGAGAAAGAAAACAGCTGCTGAATTTGGTTTATTAGATTCTACCAAGCCTCTTCCCATGACATTCTTGTGGGTGGCTTT TCAATACTTGTTTCTTGGTTCTGCTGATCTTTTCACTTTGGCTGGGATGATGGAGTTCTTCTTCACAGAGGCACCATGGA GCATGAGGTCATTGGCCACAGCACTCTCATGGGCCTCACTGTCCATGGGGTACTTCCTGAGCACTGTTCTTGTGTCCATT ATTAATAAGGTCACAGGAGCTTTTGGACACACACCATGGCTCTTGGGTAGCAACTTGAATCATTATCATCTTGAGAGATT TTATTGGTTGATGTGTGTGCTTAGTGGACTAAATTTTATTCATTATCTCTTCTGGGCCAATTCCTACAAGTACAGAGGTT CACCAAGGTCTGGATATTAGAACAAATTGTAGACATAACCATTTCTTGTATAACTCTATAACTATAACCACCCTTTATTC CATTCCATGAGAGAGATGTTCCATGAACCACATATGCATGATCATAGATGCAATTAGTACCTTTGTATCTACTGTTACAT ATATCACTTGGCAGCTTACAAAATAATTTAATAAGTGTACCACATTCTGTTTTTAGAATAATACTTTGCCATTTATAATG TAACTAGTTTAGCTTGTTGGCAACTTATGTAATGGTGTCAAACAAATGGTGATTGTAGTTTTGCAGCCACCAGTTGCTTC TCTATTTCCTCAT
CDS sequence (LotjaGi4g1v0246400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAGGACAGGTGCAAGTTTGGGAAGGCTATGTAGATTGGAGGAACAGACCAGCCAAAAAAGGACATCATGGTGG CATGCTTGCTGCTTCCTTTGTTTTGGCTGTGGAGGTATTAGAGAACCTAGCATATCTTGCTAATGCAAGCAACCTTGTTT TGTACCTGACCAAGTTTATGCACTTTTCACCATCCACCTCTTCCAACATTGTCACCAATTTCATGGGAACAGCTTTCCTC CTTGCTATTCTTGGTGGGTTTCTGGCTGATGCATTTTTCACCACTTATTCCATCTATCTCATAAGTGCTGCAATAGAATT CATGGGCCTATTAGTCCTTACAATACAAGCACACATGCCATCACTGAAACCACCAAACTGCCTTATGGGAGATTCCAGCA GTCACCTATGTCAGAAACTTCATCAAGGGGAGGCAGTTATGCTCTTTGCAGGCCTCTATCTAGCAGCTCTCGGCGTAGGA GGAATAAAAGGATCACTTCCTCCTCATGGGGCTGAGCAGTTAGATGAGACCACCCTAGATGGAAGGAAAAAGAGGTCTGA ATTTTTCAATTACTTTGTCTTCAGCCTCTCATGTGGGGCATTGATTGCAGTCACTTTTGTGGTGTGGATTGAAGACAACA AGGGATGGCAGTGGGGTTTAAGTGTCTCAACTGCATCAATATTGATCTCCATTCCAGTTTTCCTTCTTGGTTCACCAACA TACAGGACCAAGATTCCATCTGGAAGCCCCATCACATCCATGTTCAAGGTTGTTGTTTCTGCAGTTTGCAACAACTTCAA ATCAGGGAATTCAACCAATGCTGTCATAAACATGGCCACAAGTCCATCCCACACAACTGAAATCGGTGGTGAAGTTGAAG AAAGTAACACTACAAAAGAGGATCAGCTAAGTCAAAGGACTCAAACCCCAACAGAAAGCCTTAAATTCCTTAATAAAGCA GTGATGGAACCAGTTCATCCTATGCTGCAGTGCACAGTAAAGGAAGTTGAAGAGGCCAAGGTAGTATTAAAGATCCTTCC CATATTCATGTCCACCATAATGCTTAACTGTTGCCTTGCTCAGCTATCAACCTTCTCAGTCCAACAATCAGCCACAATGG ACACCATGCTTGGTTCCTTCAAGGTCCCACCAGCTTCTCTACCTGTGTTCCCTGTTCTCTTCATCATGATCCTTGCCCCA CTCTACAACCATTCCATTGTCCCATTTGCAAGGAAAGTGACCAAAACTGAGATGGGCATAACACATCTACAGAGAATAGG GACAGGGCTATTTCTCTCTATTGTGGCAATGGCAGTGGCTGCTTTGGTGGAAACCAAGAGAAAGAAAACAGCTGCTGAAT TTGGTTTATTAGATTCTACCAAGCCTCTTCCCATGACATTCTTGTGGGTGGCTTTTCAATACTTGTTTCTTGGTTCTGCT GATCTTTTCACTTTGGCTGGGATGATGGAGTTCTTCTTCACAGAGGCACCATGGAGCATGAGGTCATTGGCCACAGCACT CTCATGGGCCTCACTGTCCATGGGGTACTTCCTGAGCACTGTTCTTGTGTCCATTATTAATAAGGTCACAGGAGCTTTTG GACACACACCATGGCTCTTGGGTAGCAACTTGAATCATTATCATCTTGAGAGATTTTATTGGTTGATGTGTGTGCTTAGT GGACTAAATTTTATTCATTATCTCTTCTGGGCCAATTCCTACAAGTACAGAGGTTCACCAAGGTCTGGATATTAG
Protein sequence (LotjaGi4g1v0246400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEGQVQVWEGYVDWRNRPAKKGHHGGMLAASFVLAVEVLENLAYLANASNLVLYLTKFMHFSPSTSSNIVTNFMGTAFL LAILGGFLADAFFTTYSIYLISAAIEFMGLLVLTIQAHMPSLKPPNCLMGDSSSHLCQKLHQGEAVMLFAGLYLAALGVG GIKGSLPPHGAEQLDETTLDGRKKRSEFFNYFVFSLSCGALIAVTFVVWIEDNKGWQWGLSVSTASILISIPVFLLGSPT YRTKIPSGSPITSMFKVVVSAVCNNFKSGNSTNAVINMATSPSHTTEIGGEVEESNTTKEDQLSQRTQTPTESLKFLNKA VMEPVHPMLQCTVKEVEEAKVVLKILPIFMSTIMLNCCLAQLSTFSVQQSATMDTMLGSFKVPPASLPVFPVLFIMILAP LYNHSIVPFARKVTKTEMGITHLQRIGTGLFLSIVAMAVAALVETKRKKTAAEFGLLDSTKPLPMTFLWVAFQYLFLGSA DLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVSIINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLS GLNFIHYLFWANSYKYRGSPRSGY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 7 | 578 | 572 | 0.0 | – | |
| PANTHER | 7 | 578 | 572 | 0.0 | ||
| TMHMM | 25 | 47 | 23 | - | – | |
| Phobius | 26 | 47 | 22 | - | – | |
| CDD | 28 | 571 | 544 | 0.0 | – | |
| SUPERFAMILY | 43 | 572 | 530 | 1.31E-16 | ||
| Phobius | 48 | 66 | 19 | - | – | |
| TMHMM | 67 | 89 | 23 | - | – | |
| Phobius | 67 | 89 | 23 | - | – | |
| Phobius | 90 | 95 | 6 | - | – | |
| TMHMM | 96 | 118 | 23 | - | – | |
| Phobius | 96 | 119 | 24 | - | – | |
| Pfam | 100 | 538 | 439 | 4.7E-102 | ||
| Phobius | 120 | 144 | 25 | - | – | |
| Phobius | 145 | 162 | 18 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 163 | 187 | 25 | - | – | |
| Phobius | 188 | 210 | 23 | - | – | |
| TMHMM | 188 | 210 | 23 | - | – | |
| Phobius | 211 | 215 | 5 | - | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 216 | 237 | 22 | - | – | |
| Phobius | 238 | 340 | 103 | - | – | |
| MobiDBLite | 284 | 308 | 25 | - | – | |
| Phobius | 341 | 362 | 22 | - | – | |
| TMHMM | 342 | 364 | 23 | - | – | |
| Phobius | 363 | 381 | 19 | - | – | |
| Phobius | 382 | 402 | 21 | - | – | |
| TMHMM | 384 | 406 | 23 | - | – | |
| Phobius | 403 | 422 | 20 | - | – | |
| Phobius | 423 | 443 | 21 | - | – | |
| TMHMM | 426 | 445 | 20 | - | – | |
| Phobius | 444 | 462 | 19 | - | – | |
| Phobius | 463 | 485 | 23 | - | – | |
| TMHMM | 465 | 487 | 23 | - | – | |
| Phobius | 486 | 505 | 20 | - | – | |
| Phobius | 506 | 526 | 21 | - | – | |
| TMHMM | 507 | 526 | 20 | - | – | |
| Phobius | 527 | 551 | 25 | - | – | |
| TMHMM | 552 | 574 | 23 | - | – | |
| Phobius | 552 | 571 | 20 | - | – | |
| Phobius | 572 | 584 | 13 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0246400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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