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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0246700 |
| Transcript ID | LotjaGi4g1v0246700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT1G74720.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|A0A0S3R7Q2|A0A0S3R7Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0246700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59812619..59816673) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGAAATCCCTTGGCAAGAGAGCATGGAATCTTTGCTCACTGTCATCACATTCATTCACAACAAACTTCACAAACCAT CATTCCCAAAAATAAAAACAACAATTTATATTTATATTTATAATTAAAAATAAAAAACAAAACCCGCACCACAAAACGAT ACGAACCTTGGTTTCTCTCTGTCCAACGCAAACGCAAACGCAAATCAATCACACTGACTCACCGCTATCAACGCACGCTG CAATTCCACGCAGACATGACAATATGACCACCAAAACGACGCCGTTTCACCACCAGCCACCGCAAACCGTCAGGAGGCTG GTGGTGGAGGTGGTGGACGCGCGGAACCTGCTTCCCAAAGATGGCCAGGGAAGCTCCAGCCCTTATGTAGTGGCGGACTT CGACGGCCAGAGGAAGCGAACCACCACCCGGTTCAAGGAGCTCAACCCGGTATGGAACGAACCGCTCGAGTTCATCGTCT CCGACCCGGAGACCATGGAGTTTGAGGAGCTGGAGGTTGAGGTCTATAACGATAAGAAGTTTGGGAACGGTAGCGGCCGG AAGAATCACTTCCTCGGAAGGGTCAAGCTCTATGGAACCCAGTTTTCTCAGAGAGGGGAAGAAGCTCTGGTTTACTATAC TCTAGAGAAGAGGAGCGTGTTCAGTTGGATCAGAGGTGAGATTGGACTCAAGATTTATTACTACGATGAGCTGTTGCTTC ATGATGATGAGAAACAGCAGCAGCAGCAACCGCCGCCGGAGCAAGAGAGGAGCAGGATGGTGGTAGAAGAAGGAAGGGTG TTTGAAGTTCCTGGACAAATGGAGCATTGCGTGCCTCTTCCTGAAGGTCCACCTCATTCGCCGGGTGTTGTGGTGGTGGA GCAATCGCCGCCGCCGGTGGTTCATGTCCAGCAGGATCAACCGGAGGTGCAGGAAATGTATGGTCCTCCGGTGCAGGAAA TGCCGTACCATCATCATCCTGAGGTGAGGAAAATGCAGGCGGTTAGAGGGGAGAGGGTGAGGGTTCTGAAGAGGCCTAAC GGTGGTGGTGACTACTCGCCGAAGAACATCTCCGTCAAGAAGGAGAAGGCTGGTGTTGATACCGAGAGGGTGCATCCCTT CGATCTGGTGGAACCGATGCAGTATCTGTTTGTGAGAATCGTGAAGGCTCGCGGTGTTGCTCCGCCCGGTGAAAGCCCCT ACGTCAAGGTGAGAACGTCCAGCCACTACGTCAGATCGAAACCAGCGAGTCTCCGGCCAAACGAGCCCAGCGACTCGCCG GAGTGGAACCAGGTGTTTGCATTGGGTTACAACAAGAACGACGCCAACAGCGCTACGCTGGAGATCTCAGTTTGGGATTC CCCGACGGAGAGTTTCCTCGGCGGCGTTTGCTTCGATCTCTCCGACGTCCCGGTGCGAGATCCTCCAGACAGCCCCCTGG CTCCGCAGTGGTACCGTCTAGAAGGAGGCGCCGCCGATCAAAACCCTGGCAGAGTCTCCGGTGACATCCAGCTCTCCGTC TGGATCGGTACCCAATCCGACGACGCATTCCCGGAAGCGTGGAGCTCCGACGCGCCGTATGTAGCGCACACTCGCTCCAA GGTTTACCAATCGCCGAAGCTCTGGTATCTCCGGGTGACGGTTATCGAAGCGCAGGATCTAAACATGGCTCAGAATCTCC CTCCATTGACAGCACCGGAAGTTAGAGTGAAAATCCAATTAGGGTTCCAATCGCAGAGAACAAGGCGAGGCTCCATGAAC CACCACAGCATGTCGTTTCACTGGAACGAGGAGCTTCTCTTCGTCGCCGGAGAACCGCTAGAAGAAACGGTTATCCTCCT TGTAGAAGATCGAACCACCAAGGAACCTTCGCTGTTAGGCCACGCCGTGATTCCTTTAGTCTCAATCGAGCAACGGATCG ACGAGCGTCACGTGCCGGCGAAATGGTTCACTCTAGAAGGAGGTTCCTACTGCGGCAGAGTCCACCTCCGCCTCTGCTTA GAAGGAGGCTATCACGTGCTCGACGAGGCGGCGCACGTGTGCAGCGACTTCCGTCCCACGGCGAAGCAGTTATGGAAACC ACCCGTCGGAATTCTGGAGCTCGGAATCCTCGGCGCTCGCGGCCTTCTTCCGATGAAATCCAAGGGCCCTGGAAAAGGGT CCACCGATGCTTACTGTGTTGCCAAGTACGGGAAGAAGTGGGTCCGAACGCGCACCGTCACCGACAGCTTCGACCCACGG TGGAACGAGCAGTACACGTGGCAGGTTTACGACCCCTGCACCGTCCTCACCGTCGGGGTTTTTGATAACTGGCGCATGTT CGCTGAAGTCTCAGAGGAAAAACCAGATAGCCGCATCGGAAAGGTACGAATTCGTGTTTCCACGCTTGAGAGCAACAAAA TCTACACCAGTTCGTATCCTCTTCTGGTTCTGACACGAACCGGGTTGAAGAAGATGGGGGAGATTGAGCTAGCGGTGCGG TTTGCGTGCCCGTCGTTGCTGCCGGAAACTTCTGCGGTTTACGGGCAGCCGCTGCTGCCCAGAATGCACTACCTCCGCCC GCTTGGGGTGGCGCAGCAGGAGGCTCTTCGCGGCGCAGCCACGAAGATGGTGGCGCAATGGCTGGCGAGGTCGGAGCCGG CGTTGGGGCATGAGGTGGTTCGGTACATGCTGGATGCGGATTCACACGCTTGGAGTATGAGGAAGAGCAAGGCGAATTGG TTCAGAATTGTGGCGGTTTTGGCCTGGGCTGTTGGGTTGGCGAAGTGGTTGGATGACATAAGGAGGTGGAGGAATCCGGT GACGACGGTGCTGCTTCATGTTCTCTACTTAGTGCTAGTTTGGTACCCGGATTTGATTGTTCCCACAGGGTTTCTATACA TTGTTCTGATTGGGATATGGTACTACCGGTTCCGGCCGAAGATTCCGGCGGGGATGGATACACGGTTGTCGCAGGCGGAG GCGGTTGACCCGGATGAGCTTGATGAGGAGTTTGACACAATGCCGAGTTCCAAGCCGCCCGAGCTGATTCGCGTCCGGTA CGATAGGTTGAGGATGTTGGCCGCCAGGGTTCAGACGGTGTTGGGTGATTTCGCGACGCAGGGGGAGAGGGTTCAGGCAT TGGTGAGCTGGAGGGACCCGAGGGCTACTAAATTGTTCATTGGGGTGTGTCTATTGATTACCATTGTGCTCTACTCGGTG CCGCCGAAGACGGTGGCGGTGGCATTGGGGTTTTACTACCTCCGGCACCCCATGTTCCGGAACCCAATGCCGCCGCGGAG TTTGAACTTTTTCCGGCGACTGCCTAGCTTGTCTGATCGGTTAATGTAGATTAGTCAAATTCAACAAAGTTTACATTTTA TTTTTGTTACAGTTTTTTTAAGTGACAATTCTTTTAGAGATGAAAACGAAAAATTAAAGTGATGATGAATACACGAGGGT GTGGAAACTGGAAAGTAACTAGCAGCTGGTTAGTGATGTTTGCAAATGCTGTTCTCAATAGCCTTGTAAGGAGAAAAAAA GGGAGTGAAAAGTGGCTAATTGTCATCATTTTTTTGGTTGTGGTCAAATTAATTGACTGTTTGTCTTGTTGGAGACTTGA AATAAGAGAAAGGTAGAAGAAGGTGGGGAATGAGGATGGGATGCAAGAGACAGACATTGTGGGAGAAATTTTGGGTACCT TTGGGATCTTTTCTGACACTTAAATTTTTAAAGAACCATTGCATCAACAGCTTCTATGCTGTTTATTTTGTATCTATGTA TATGGCGATTACCTCTTAACTTTCCTAATTTTGGACTTATGTAACTTCATCACTCACTAATGCTCTAACACAATGTCTTT ATAAGGAAAACACTTTATAGGGAAGCACTCTATAGGGACGTAGAAAACAATTTTTTAATGCTAATTTAAATGGTTAAGGG TGTAAGACTGTAAGTAAGTAGTATGGTCCTAAATATATTACACAATCTCCCTTGTTGTCGAGTAGGGGTGCTAATGCTAT GCTACTAATATTCTGGAAAATATTGTTTTCTGCAACTTGAAGCTTATACATATGC
CDS sequence (LotjaGi4g1v0246700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCACCAAAACGACGCCGTTTCACCACCAGCCACCGCAAACCGTCAGGAGGCTGGTGGTGGAGGTGGTGGACGCGCG GAACCTGCTTCCCAAAGATGGCCAGGGAAGCTCCAGCCCTTATGTAGTGGCGGACTTCGACGGCCAGAGGAAGCGAACCA CCACCCGGTTCAAGGAGCTCAACCCGGTATGGAACGAACCGCTCGAGTTCATCGTCTCCGACCCGGAGACCATGGAGTTT GAGGAGCTGGAGGTTGAGGTCTATAACGATAAGAAGTTTGGGAACGGTAGCGGCCGGAAGAATCACTTCCTCGGAAGGGT CAAGCTCTATGGAACCCAGTTTTCTCAGAGAGGGGAAGAAGCTCTGGTTTACTATACTCTAGAGAAGAGGAGCGTGTTCA GTTGGATCAGAGGTGAGATTGGACTCAAGATTTATTACTACGATGAGCTGTTGCTTCATGATGATGAGAAACAGCAGCAG CAGCAACCGCCGCCGGAGCAAGAGAGGAGCAGGATGGTGGTAGAAGAAGGAAGGGTGTTTGAAGTTCCTGGACAAATGGA GCATTGCGTGCCTCTTCCTGAAGGTCCACCTCATTCGCCGGGTGTTGTGGTGGTGGAGCAATCGCCGCCGCCGGTGGTTC ATGTCCAGCAGGATCAACCGGAGGTGCAGGAAATGTATGGTCCTCCGGTGCAGGAAATGCCGTACCATCATCATCCTGAG GTGAGGAAAATGCAGGCGGTTAGAGGGGAGAGGGTGAGGGTTCTGAAGAGGCCTAACGGTGGTGGTGACTACTCGCCGAA GAACATCTCCGTCAAGAAGGAGAAGGCTGGTGTTGATACCGAGAGGGTGCATCCCTTCGATCTGGTGGAACCGATGCAGT ATCTGTTTGTGAGAATCGTGAAGGCTCGCGGTGTTGCTCCGCCCGGTGAAAGCCCCTACGTCAAGGTGAGAACGTCCAGC CACTACGTCAGATCGAAACCAGCGAGTCTCCGGCCAAACGAGCCCAGCGACTCGCCGGAGTGGAACCAGGTGTTTGCATT GGGTTACAACAAGAACGACGCCAACAGCGCTACGCTGGAGATCTCAGTTTGGGATTCCCCGACGGAGAGTTTCCTCGGCG GCGTTTGCTTCGATCTCTCCGACGTCCCGGTGCGAGATCCTCCAGACAGCCCCCTGGCTCCGCAGTGGTACCGTCTAGAA GGAGGCGCCGCCGATCAAAACCCTGGCAGAGTCTCCGGTGACATCCAGCTCTCCGTCTGGATCGGTACCCAATCCGACGA CGCATTCCCGGAAGCGTGGAGCTCCGACGCGCCGTATGTAGCGCACACTCGCTCCAAGGTTTACCAATCGCCGAAGCTCT GGTATCTCCGGGTGACGGTTATCGAAGCGCAGGATCTAAACATGGCTCAGAATCTCCCTCCATTGACAGCACCGGAAGTT AGAGTGAAAATCCAATTAGGGTTCCAATCGCAGAGAACAAGGCGAGGCTCCATGAACCACCACAGCATGTCGTTTCACTG GAACGAGGAGCTTCTCTTCGTCGCCGGAGAACCGCTAGAAGAAACGGTTATCCTCCTTGTAGAAGATCGAACCACCAAGG AACCTTCGCTGTTAGGCCACGCCGTGATTCCTTTAGTCTCAATCGAGCAACGGATCGACGAGCGTCACGTGCCGGCGAAA TGGTTCACTCTAGAAGGAGGTTCCTACTGCGGCAGAGTCCACCTCCGCCTCTGCTTAGAAGGAGGCTATCACGTGCTCGA CGAGGCGGCGCACGTGTGCAGCGACTTCCGTCCCACGGCGAAGCAGTTATGGAAACCACCCGTCGGAATTCTGGAGCTCG GAATCCTCGGCGCTCGCGGCCTTCTTCCGATGAAATCCAAGGGCCCTGGAAAAGGGTCCACCGATGCTTACTGTGTTGCC AAGTACGGGAAGAAGTGGGTCCGAACGCGCACCGTCACCGACAGCTTCGACCCACGGTGGAACGAGCAGTACACGTGGCA GGTTTACGACCCCTGCACCGTCCTCACCGTCGGGGTTTTTGATAACTGGCGCATGTTCGCTGAAGTCTCAGAGGAAAAAC CAGATAGCCGCATCGGAAAGGTACGAATTCGTGTTTCCACGCTTGAGAGCAACAAAATCTACACCAGTTCGTATCCTCTT CTGGTTCTGACACGAACCGGGTTGAAGAAGATGGGGGAGATTGAGCTAGCGGTGCGGTTTGCGTGCCCGTCGTTGCTGCC GGAAACTTCTGCGGTTTACGGGCAGCCGCTGCTGCCCAGAATGCACTACCTCCGCCCGCTTGGGGTGGCGCAGCAGGAGG CTCTTCGCGGCGCAGCCACGAAGATGGTGGCGCAATGGCTGGCGAGGTCGGAGCCGGCGTTGGGGCATGAGGTGGTTCGG TACATGCTGGATGCGGATTCACACGCTTGGAGTATGAGGAAGAGCAAGGCGAATTGGTTCAGAATTGTGGCGGTTTTGGC CTGGGCTGTTGGGTTGGCGAAGTGGTTGGATGACATAAGGAGGTGGAGGAATCCGGTGACGACGGTGCTGCTTCATGTTC TCTACTTAGTGCTAGTTTGGTACCCGGATTTGATTGTTCCCACAGGGTTTCTATACATTGTTCTGATTGGGATATGGTAC TACCGGTTCCGGCCGAAGATTCCGGCGGGGATGGATACACGGTTGTCGCAGGCGGAGGCGGTTGACCCGGATGAGCTTGA TGAGGAGTTTGACACAATGCCGAGTTCCAAGCCGCCCGAGCTGATTCGCGTCCGGTACGATAGGTTGAGGATGTTGGCCG CCAGGGTTCAGACGGTGTTGGGTGATTTCGCGACGCAGGGGGAGAGGGTTCAGGCATTGGTGAGCTGGAGGGACCCGAGG GCTACTAAATTGTTCATTGGGGTGTGTCTATTGATTACCATTGTGCTCTACTCGGTGCCGCCGAAGACGGTGGCGGTGGC ATTGGGGTTTTACTACCTCCGGCACCCCATGTTCCGGAACCCAATGCCGCCGCGGAGTTTGAACTTTTTCCGGCGACTGC CTAGCTTGTCTGATCGGTTAATGTAG
Protein sequence (LotjaGi4g1v0246700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTKTTPFHHQPPQTVRRLVVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNEPLEFIVSDPETMEF EELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSQRGEEALVYYTLEKRSVFSWIRGEIGLKIYYYDELLLHDDEKQQQ QQPPPEQERSRMVVEEGRVFEVPGQMEHCVPLPEGPPHSPGVVVVEQSPPPVVHVQQDQPEVQEMYGPPVQEMPYHHHPE VRKMQAVRGERVRVLKRPNGGGDYSPKNISVKKEKAGVDTERVHPFDLVEPMQYLFVRIVKARGVAPPGESPYVKVRTSS HYVRSKPASLRPNEPSDSPEWNQVFALGYNKNDANSATLEISVWDSPTESFLGGVCFDLSDVPVRDPPDSPLAPQWYRLE GGAADQNPGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVIEAQDLNMAQNLPPLTAPEV RVKIQLGFQSQRTRRGSMNHHSMSFHWNEELLFVAGEPLEETVILLVEDRTTKEPSLLGHAVIPLVSIEQRIDERHVPAK WFTLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKSKGPGKGSTDAYCVA KYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFAEVSEEKPDSRIGKVRIRVSTLESNKIYTSSYPL LVLTRTGLKKMGEIELAVRFACPSLLPETSAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPALGHEVVR YMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWRNPVTTVLLHVLYLVLVWYPDLIVPTGFLYIVLIGIWY YRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPELIRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPR ATKLFIGVCLLITIVLYSVPPKTVAVALGFYYLRHPMFRNPMPPRSLNFFRRLPSLSDRLM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 818 | 818 | - | – | |
| Gene3D | 13 | 178 | 166 | 2.0E-28 | ||
| PANTHER | 14 | 1021 | 1008 | 0.0 | – | |
| PANTHER | 14 | 1021 | 1008 | 0.0 | – | |
| CDD | 18 | 148 | 131 | 8.73545E-64 | – | |
| SUPERFAMILY | 18 | 165 | 148 | 7.4E-26 | – | |
| SMART | 18 | 123 | 106 | 8.3E-14 | ||
| ProSiteProfiles | 18 | 108 | 91 | 14.956 | ||
| Pfam | 18 | 113 | 96 | 2.1E-18 | ||
| Gene3D | 290 | 436 | 147 | 1.3E-13 | ||
| SMART | 294 | 391 | 98 | 1.6E-12 | ||
| SUPERFAMILY | 294 | 439 | 146 | 4.7E-17 | – | |
| Pfam | 294 | 397 | 104 | 3.1E-7 | ||
| CDD | 294 | 423 | 130 | 6.52346E-52 | – | |
| Gene3D | 439 | 582 | 144 | 4.1E-14 | ||
| Pfam | 454 | 564 | 111 | 3.1E-9 | ||
| SUPERFAMILY | 454 | 600 | 147 | 2.28E-19 | – | |
| CDD | 455 | 598 | 144 | 5.00817E-60 | – | |
| SMART | 455 | 557 | 103 | 0.0014 | ||
| ProSiteProfiles | 456 | 542 | 87 | 8.666 | ||
| Gene3D | 592 | 741 | 150 | 5.5E-25 | ||
| Pfam | 609 | 720 | 112 | 9.9E-24 | ||
| SUPERFAMILY | 609 | 761 | 153 | 4.98E-27 | – | |
| SMART | 610 | 717 | 108 | 1.1E-12 | ||
| CDD | 610 | 737 | 128 | 5.05255E-64 | – | |
| ProSiteProfiles | 611 | 702 | 92 | 9.776 | ||
| Phobius | 819 | 836 | 18 | - | – | |
| Phobius | 837 | 847 | 11 | - | – | |
| Phobius | 848 | 881 | 34 | - | – | |
| TMHMM | 859 | 881 | 23 | - | – | |
| Pfam | 866 | 1021 | 156 | 2.7E-69 | ||
| Phobius | 882 | 963 | 82 | - | – | |
| Phobius | 964 | 993 | 30 | - | – | |
| TMHMM | 966 | 988 | 23 | - | – | |
| Phobius | 994 | 1021 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0246700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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