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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0251900 |
| Transcript ID | LotjaGi4g1v0251900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT2G03760.1 sulfotransferase 12; Swiss-Prot: sp|P52839|SOT12_ARATH Cytosolic sulfotransferase 12; TrEMBL-Plants: tr|V7CDV4|V7CDV4_PHAVU Sulfotransferase; Found in the gene: LotjaGi4g1v0251900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60564660..60567589) extracted from Lotus japonicus Gifu genome v1.2.
TCATTGCTCGGATTGCCCAGTGTCCCAAAACTTCTCCCAACCTTATTGCCCAGCATCACAAAAACTTCTTCAAAGTTCAA ACTTTACCCATCCAGAGCAATCAAAAACAACAAACATAAATTAGTAAAAATGAAAATCCAATCTTCAATTTGAAGATGAG GCAGAAGCCAATGGTGATGAACGCATAAATTAAAAAGCAAATTACCATGAATTGAAAAACTAGTGGTGATGAATACATAA GCCAAACCTTACAAATTACAATCCAATCAAGTTCCAAGAGTGAAAGCTAGACCAATAAAAACAAAGAAAAAACATTGAAC ATGAAACAAGTTCCAATTGCAACCTCAGACGATGGAAAACACCATTCCCAGAGCCACCACGCTCCAGCCTCCAGTACGGA GCCACCATGACTAAAGCTTCCTTCGATCTCCCCCTTTTTCCGTCGCAACCCAGTTAGTGATCTATGGCAGCTACAGCTTC ATCGAGTTCTACTTCAAACTTCAGATTCGCGGCTGAATTGCTTAGATCTACAGTTCGAGCGATGTCTCAGCGTCAGTGAA GATGATATGGGTTGTATCTGCTAGTATATGCTACTGTTATCCTCTGACTCTGATATTTAACTGCAAAGGTGTTGGAGATG GCAAGTGGTCGTTGTATGGGGCTTTAGACAATAGGGTTTTGATCAGGACCTGGTTTTCTATGGTGGTTTGGGCGATGAGG ATGCATTTGGGTTTCGATGGAGGTGTGGGTTTCGGCGGCGGTGCTGAGGATTTCGGTGGAGGAGATCTAAGGAGAGGAGA GGAGAGGTGAGGGTAATGAGGTTATTTTCACCTTATTTTTATGACATTTACTTTTTTATTTATTTTTCAACAAGTAACTT TTACTTGCTATAATAAGTCAAATTGGCTCTTGCATGGTGCAAGACCTAGAGTGCACTTGCACCCTAACAACCACCTTACC TGTTTGTTTGTCAAAATATGAAAACTTGATCTGTTTCTAAAAACTGTTTTTTTTTTAAACTGTTGTTATTTTCAGTTTTT AAAACTAAAAAACCAAAACAGCTAAAAGATGTTTTCAGTTTCTGTTTTTAGTTTTCAGATATTAGAGTTCTTAATGTTAA AAAACATGTCATTCAAACTGTTTTATTCTTCTGAAAATTGTTTTAAAAACTGAAAACTAAGACTGCAATGAAAGAGGCCC TAATTCTTTTTTTTTTTGAAAAGAATTCATATTCTTATTTATATTAATAACGATCACATATACCTAACTAATTAAATAAA GAAGAAAATATGCATGGAAAATAATCAATTATCGCATATTCTTAATTTAACAATAGAGAAGTGTTAGTAATATTCACTTC AACACTCATTTTTTGACACTCTTCTTCTATTAAAATTCGTATAGGTTATTAAATTGAAAGTAAAACTCAAGTGTTTAAAA GTGATATTAAAGTTTTCTATAAAAATATAATCTCACTTGCATAGTTTCCTAACTACTATAATATAATATTTTCGTAATTT GCTTATGTAGATTTAGTCCCTTCTATACAGAATTTCCAATACATACCCTCAATGTTTTAATTTAAAAGTTTTTTAGTGAA AGATATCATGTGAAATTCACTTGTAAGTTGTTTATAAACCCATGGAGTGCACCTCAACCTGCATTGCAATCATCGAGCTC CCTCTGGGAACACCATGTCAGAAGCTCAATCCACTGATCCTCTACCCAAATACTTGCAAGAGAATGAAATAACCCAAGAA TGTTTGGAGCTAATCCCCACCTTACCAAGGGAAAAGGGTTGGGTTGCAAGCCACCTCCACCAATACCAAGGTTTTTGGCA CAACACTAGGCAGCTACAAGGAGTTTTATCATGTCAAAAGCACTTTCAAGCCCATAACACAGATATCTTCATTGTCACCA TTCCCAAATCAGGCACCACCTGGCTCAAGGCACTCACATTTTCCTTGCTTAACCGCCACAAATACCCAAATATCCAACAA AACCATCCTCTGCTCACTCACAATCCCCATTTTCTTGTACCTTTCTTAGAGCTAGTCCTCTATCAACCCAAAGACAGAGA CTTTCCTCCTGATCTCAACTCACTCCCCTCCCCAAGGCTCTTCTCCACTCATCTCCCTCATGTCTCATTGCCAAAATCCA TCGTAGACTCATCTTGCAAGATAGTTTATCTTTGTAGAGACCCTAAAGACACTTTCATTTCAATGTGGTATTTCACAAAC AGGTTGAGACTTGAAAACAAAGGAACCAATTCACTTGAAGAGGCTTTTGAGAAATTCTGCAGAGGAGTAAGCCTATGTGG GCCCTTTTGGGACCATGTGCTGGGGTACTGGAAGAAGAGCTTGGAAGAGCCAGAAAAGGTAATGTTCTTGAGGTTTGAAG ATATGAAGATGAAGCCTGCTTGTGTTTTGAAAGAACTTGCTAGGTTTTTGGGTTGCCCATTTTCTGAAAAAGAAGAGGGT GCAGGGGTGGTGGATGAGATTATCAAGCAGTGCAGTTTTGATGAGTTGAGCAACTTAGAAGTGAATAAGAAGGAAAAGCT GTCATCTGGTGAAGAACACAAAGCTTTCTTTCGTCGTGGTGAAGTGGGAGATTGGAAAAACCATCTCACAGATGAGATGG TCGAACAAATGAACACGATTACTGAAAAGAAACTAGCTGAAGATGGATTAACATTTTAGATTTCGATTAATTCCTTCACA TAAGGTTATCTTGCTACTATGCTTGGATGTGTCAGAAAGTCATGGTAGACAACCACCAAAACTAAGAAAAACTGTTTTTA TCACATTTTGATGTATCCAAACTTGCACTTATTCGGCCATTTATAATGATTAATTTGTCTTGATTAATCCTAACTGTCAG TTTCTAAGTATCTTTTGTGTCATTATTTTTTTGTAATTGAGATAACTTTA
CDS sequence (LotjaGi4g1v0251900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGAAGCTCAATCCACTGATCCTCTACCCAAATACTTGCAAGAGAATGAAATAACCCAAGAATGTTTGGAGCTAAT CCCCACCTTACCAAGGGAAAAGGGTTGGGTTGCAAGCCACCTCCACCAATACCAAGGTTTTTGGCACAACACTAGGCAGC TACAAGGAGTTTTATCATGTCAAAAGCACTTTCAAGCCCATAACACAGATATCTTCATTGTCACCATTCCCAAATCAGGC ACCACCTGGCTCAAGGCACTCACATTTTCCTTGCTTAACCGCCACAAATACCCAAATATCCAACAAAACCATCCTCTGCT CACTCACAATCCCCATTTTCTTGTACCTTTCTTAGAGCTAGTCCTCTATCAACCCAAAGACAGAGACTTTCCTCCTGATC TCAACTCACTCCCCTCCCCAAGGCTCTTCTCCACTCATCTCCCTCATGTCTCATTGCCAAAATCCATCGTAGACTCATCT TGCAAGATAGTTTATCTTTGTAGAGACCCTAAAGACACTTTCATTTCAATGTGGTATTTCACAAACAGGTTGAGACTTGA AAACAAAGGAACCAATTCACTTGAAGAGGCTTTTGAGAAATTCTGCAGAGGAGTAAGCCTATGTGGGCCCTTTTGGGACC ATGTGCTGGGGTACTGGAAGAAGAGCTTGGAAGAGCCAGAAAAGGTAATGTTCTTGAGGTTTGAAGATATGAAGATGAAG CCTGCTTGTGTTTTGAAAGAACTTGCTAGGTTTTTGGGTTGCCCATTTTCTGAAAAAGAAGAGGGTGCAGGGGTGGTGGA TGAGATTATCAAGCAGTGCAGTTTTGATGAGTTGAGCAACTTAGAAGTGAATAAGAAGGAAAAGCTGTCATCTGGTGAAG AACACAAAGCTTTCTTTCGTCGTGGTGAAGTGGGAGATTGGAAAAACCATCTCACAGATGAGATGGTCGAACAAATGAAC ACGATTACTGAAAAGAAACTAGCTGAAGATGGATTAACATTTTAG
Protein sequence (LotjaGi4g1v0251900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEAQSTDPLPKYLQENEITQECLELIPTLPREKGWVASHLHQYQGFWHNTRQLQGVLSCQKHFQAHNTDIFIVTIPKSG TTWLKALTFSLLNRHKYPNIQQNHPLLTHNPHFLVPFLELVLYQPKDRDFPPDLNSLPSPRLFSTHLPHVSLPKSIVDSS CKIVYLCRDPKDTFISMWYFTNRLRLENKGTNSLEEAFEKFCRGVSLCGPFWDHVLGYWKKSLEEPEKVMFLRFEDMKMK PACVLKELARFLGCPFSEKEEGAGVVDEIIKQCSFDELSNLEVNKKEKLSSGEEHKAFFRRGEVGDWKNHLTDEMVEQMN TITEKKLAEDGLTF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 334 | 330 | 3.1E-112 | – | |
| PANTHER | 21 | 329 | 309 | 1.2E-150 | – | |
| PANTHER | 21 | 329 | 309 | 1.2E-150 | – | |
| SUPERFAMILY | 34 | 334 | 301 | 3.8E-83 | ||
| Pfam | 69 | 329 | 261 | 3.0E-78 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Sulfotransferase activity | Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate. |
Expression pattern of LotjaGi4g1v0251900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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