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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0256800 |
| Transcript ID | LotjaGi4g1v0256800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT3G03290.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T2C4|I3T2C4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0256800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:61182198..61185686) extracted from Lotus japonicus Gifu genome v1.2.
CCCAAAGTCTTCATGGTTGCCACGTTCTATATAGAAGAACCCCACAACGAAGAAATCACACAAAAACAAACAAAGAAACC ATTAAAACATTTGAAAAAAAATCATTGAAAAACAAATTGCAGAGTCAAAGGTCTTAAACTCTGTTCAGTGTAGCTCAATG TGTGTCTTGTATATATATGATGATATAGAGTTATAGACACAGCTTCAAGTGATATAGAACTAACAAAACATGGGAATTAG GCCACGTATCAGGGTGCAAAGTTTGTGCTTTGGAGTTGCCACGCCTCGTGTTCGAGCCTGTGCTGCTGCTTCCAGTTTTT CTTCCAAGTCCCCAAATTCAAATAGAACTGCGTTTTCAAGCAGAGGCCAAGACTATGGAAGAGGCAAGGGTGATAAGGGG GATCATGAAAGTGGAAATAAAGTAATGGTGGTTGTGGATTCAAGCTTTGAAGCTAAAGGGGCTCTTGAATGGGCACTCTC TCATGCTGTTCAGAGTCAGGACACTGTTGTTCTTGTTCATGTTGCCAAGGCCAGAGAAGGTGAGAAATCATTCCACTATT TCTTTTTGCAATTATAAATTAGCTACTTACATTTTTTATTGGTTTTTATATGTATTAAATTACATGGATTTCACACTCAA TTTTCATATGAGACCCACAAAATTTTTGACTAATAAAAATGGAATGAATGCTCAATTTCGTCCATAAAAATGTAAGCGTT GAGCAAGTTAGTCCCGGGAAGAAGAAAACACTCTAATAGTCCATAATTATGTTAAATGTTGGTCAAGTTATAAATTTTCT ATCAAATTAGTCATGTTTAAGACTAAATGGAGCGACACTTGACACAATCATGAACCGTAATTCTTTCTTCTAAGGACTAG CGTGTCTGACCCTTAATTTTCAGGGACGGAATTGAGGATTCAATCCATAGAAATGCTTATGACATACTAATAAATTGAAT TTCTAGCATATCTATAGACAAATGTAAAAGCGAAAAGAAAGTTGATTAATTCAACTATGCTATGTTCCCCAGATGCAGAG TCTCCTGGGAAGTTTAATGTGAAGGCATATCAACTACTCCTAGACATGAAAAGCATGTGCGAGATGAAGAAACCTGGGGT AAGTTCCAAACATTTTTAAACCTTCCCTCCTCAATTGAATCTTCTTTCTGTTGGGATAAGAGGTAATTAACATGTTGAGT TTTGGGGTTTCAGGTGCTAGTGAATGTACTGATGCTTGAAGGAGAGGAAAAGGGTGCTGCTATAGTGCAAGAGGCAAAGC AACAAAGGGTTTCATTATTGGTTGTGGGACAGAGAAAACGTTCCATTTTGTGGTGCTTTCTGAGGAGGTGGACACGGAAG AGATCATCAAGAGGTGGAGTTGTGGAGTATTGTATACAGAACTCGCCTTGCATGACCATTGCAGTGAGGAGGAAGAACAA GAAACATGGAGGCTATTTGATTACTACCAAACGCCATAAAAAGTTCTGGCTTTTGGCTTAGTGTGATAAAATGGGACCAG GTGTTAACTTGTTTCTGAAGTGCATAAGCAACAATGTTTTTCTTTATTTTTTGGAAAGATGCAATGGTGTTAACTTGTTT CTGAAGTGCATAAGCAACAATGTTTTTCCAAAATTGAGTGGGTTAAAATGCACTTTAAATTAAATTAAGATTACATATAC ATACTGATGTTTTTTTTTTCTTTTTTAGTTTAGTGGTAAGTAAATTAAATTCTAGATGAAAACACAAATTTAAATTGTCA GAAAAACAACTGTTGTGAGAGATATGCAACCGTTTTTCGAATAGATAGTAACATATGTCAACAACAACAAAAAAATGTTG TTTTACCTAATATAATCATACTTGCTTTTTATTACAAAATAGAGTCCTCAATAATAGCTCAAGTGGTAAGAGCTATGACA CATATGAGTTGGGTGAGGGAGCTCCAGGGACCGGATGTGAAATTTATCTTTTTAATGTAAAAAGAAACAAAATAGAATGT CTCTTAAATAAAATTGACCAAAAGCTGTTTTCGTCAAAAGTCCCAGAAGGAGTTATGGCCTAACTTTTCCAGCTACATTG AGCCCTATTCCAGCAAATTGGACCAAAAGTCTGGAATCAAGACAGAACACAACAAATGTCTTCCTTTTAATTATGGAGAA ACATATCGACCTAAAAAAAAATTATGGAGAAATCCAACATGCTGGGGCAAGGAAAGGCCTGAGAGTCTCCTTTATTAATA AAAAAAACAACAAAAAGGGCAAAGTCTTCTTATTGTTGGGTCCTATTAGGTGCACACGAAATTAAAATTAAGGGAAATCA TTTTAATATCATCTCTAAAGATATTTATGTTATTCATTTTCATAATTTTAATGTACAAAATATATAATTTGTGTTCAGCA CTTATAAGTACTATGTGTTATTAATATCGCGTATATAAGTGAATGTCTTTATAATGAAAATAAAAATAGAGGTGACATTA GAATCCAAAGGTGAACATTAAAATGTCTTTATAAACACTCGCATTAATTTGTTATCTTATTAGGAGTGAATGCATAGTTA AGATAAATTAGACTATGCATGAAAAAAAATGAAATTATGAAATAGTTTGGGAATGGCGATAGGTGGTGAGGATATAATTA TAGTAATTAGTTAAGTAATTGTTAATGAAAGTACAGATTCAAAAAAAAAAGATAAATATCTACCAAAAAAAAAGATAAAT GATCTTAGATTTTAATACAACCAAGGTTTTGATGAAAAAAGGAAAACAATAATAAATAAAAAAGATTAGGAAATAAGATA GTATATAAATGATATACTAACACATGAAAAATTAAATATCAGATCAGAACAAAGGGTGGCTCACTTGGTGAGCTAAGGGA ATGAAGGGATTTGCAGGGTGAAGGGTCATTTTCTAGCGCATCTATATACTTTAGAAAAGAGGAAGGCTGTGAGCCCCACC TCCATGACTTGGCATTCCAAGACTCACTCTCCACCACCCCCCTCTTTACATGACAAGTGTCACCTCCTAATTATTTTGGA CCTCAATTGTAAAAGCCCAATTACGTATTTCAGTTTTTAGCCCATTAATCAAAGATTGGTATTCAAGTTTTAAATCTGTT TTCAGCGTGTTGTGCATATAAATCCTTTGATTATAGCCCATTAATCAGTTTTTAGCACAATTATCAACGTATTTCAGTTT TCAGCGTTTCAATCATTCCTTATTTACACCACCTACTACTATAATAATTAAATGGTTCGCATCCACGTTATTTCAATTGA AAACAAACCTGGTATTTACCTTAATTAGCTCATCAAAATTAAATTCCATTAAAGGACCATTCTATTATGAATCATAACAA ATAATAGTGAGATTGACCAATATGATTTAAAAACAAAAGTCAAGACTGATTCAGAATAACATTCCGTGTGTTGATTCAGG CCGCACCAAATATGGAGGTGGACTGCCATTATTTTTTTTTCTTCCATTT
CDS sequence (LotjaGi4g1v0256800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAATTAGGCCACGTATCAGGGTGCAAAGTTTGTGCTTTGGAGTTGCCACGCCTCGTGTTCGAGCCTGTGCTGCTGC TTCCAGTTTTTCTTCCAAGTCCCCAAATTCAAATAGAACTGCGTTTTCAAGCAGAGGCCAAGACTATGGAAGAGGCAAGG GTGATAAGGGGGATCATGAAAGTGGAAATAAAGTAATGGTGGTTGTGGATTCAAGCTTTGAAGCTAAAGGGGCTCTTGAA TGGGCACTCTCTCATGCTGTTCAGAGTCAGGACACTGTTGTTCTTGTTCATGTTGCCAAGGCCAGAGAAGATGCAGAGTC TCCTGGGAAGTTTAATGTGAAGGCATATCAACTACTCCTAGACATGAAAAGCATGTGCGAGATGAAGAAACCTGGGGTGC TAGTGAATGTACTGATGCTTGAAGGAGAGGAAAAGGGTGCTGCTATAGTGCAAGAGGCAAAGCAACAAAGGGTTTCATTA TTGGTTGTGGGACAGAGAAAACGTTCCATTTTGTGGTGCTTTCTGAGGAGGTGGACACGGAAGAGATCATCAAGAGGTGG AGTTGTGGAGTATTGTATACAGAACTCGCCTTGCATGACCATTGCAGTGAGGAGGAAGAACAAGAAACATGGAGGCTATT TGATTACTACCAAACGCCATAAAAAGTTCTGGCTTTTGGCTTAG
Protein sequence (LotjaGi4g1v0256800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIRPRIRVQSLCFGVATPRVRACAAASSFSSKSPNSNRTAFSSRGQDYGRGKGDKGDHESGNKVMVVVDSSFEAKGALE WALSHAVQSQDTVVLVHVAKAREDAESPGKFNVKAYQLLLDMKSMCEMKKPGVLVNVLMLEGEEKGAAIVQEAKQQRVSL LVVGQRKRSILWCFLRRWTRKRSSRGGVVEYCIQNSPCMTIAVRRKNKKHGGYLITTKRHKKFWLLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| PANTHER | 5 | 227 | 223 | 3.5E-117 | – | |
| Phobius | 9 | 18 | 10 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 227 | 204 | - | – | |
| MobiDBLite | 27 | 45 | 19 | - | – | |
| MobiDBLite | 27 | 61 | 35 | - | – | |
| Gene3D | 62 | 208 | 147 | 1.8E-20 | ||
| SUPERFAMILY | 63 | 207 | 145 | 8.37E-16 | – | |
| CDD | 64 | 203 | 140 | 7.84621E-21 | – | |
| Pfam | 64 | 204 | 141 | 1.4E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0256800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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