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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0257200 |
| Transcript ID | LotjaGi4g1v0257200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dof zinc finger protein; TAIR: AT5G60850.1 OBF binding protein 4; Swiss-Prot: sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4; TrEMBL-Plants: tr|A0A0S3R7J3|A0A0S3R7J3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0257200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:61214857..61219405) extracted from Lotus japonicus Gifu genome v1.2.
GTGGTTTCTGTGAAAGGGGCGAGAGGGGTTTGAGAGTTTGAGGGGAATAAGGATATGAAGGGGGAGGGATATTTTGGTAT ATTCAAGCAAGTCCCATGGGCCATGAACGTAGTTATGAGTACGTTAAAGGGGTGGTTGGGTCAATTCAGTTTGAAAAATA ATAGAAAATGTAGATAGAGTACGTTTGAGTTGAGAGGATATTTGTCAGTCACAGACTCAGAAACTCCTATGGAACCAGTT TCTTCATCTCTCTGCTCTCTCTGCTCTGCTCTGCACTGCAATTTTTCTCCACACCACACTCTTCCCCCTCCCACTTCACA CACTGACACAATCAATCACACTTGTCTCAGGTGATTGATATCTCTACCTTCTCATCTGATCACACTCATCATAACACAAA ATCTCCTCAATTCCCACCCAATTCCCCAACTACCCACAATAAATTAATTTCAAAAAATCTCCCCCTGCTTCCAATATTTC ATTTCAAACGAGTTTCTCTAGTCCCACATCGAAATGCAGGAAATACATCCAATCGGAGGAGGTGGCGGTGGTGGTGGAGG AAGCAGGTTCTTCGGCGGTGCTGACAGGAGGCTCCGACCTCACCACCAACAGAACAACCAGGCTCTCAAGTGCCCCCGCT GTGACTCCATCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAAAACTGCCGC CGTTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCCGTCGGCGGTGGCTGCCGGAAGTCCACCAAACGCTCCAGTAA GCCCAAAAACTCTTCCTCGTCGGAAACCACCGATCTCCAGCTGCCAGAGCCAGAGCACAACTCCAACTCTCATTCCAGTA GCGAGAGCTCCAGCCTCACCGCCGCCGTAACGGAAGCCGTTTCAGCTCCGGCGTTGAACTCCGACCCGAATTCCAACAAC ATGCACGAGTCGAAATTGTTGAACTCTGTTCTGGATGCGAATGCTCTGGAACAAGCAGGAACAGGGGACTGTGGCGGCGG TGGTATTTTCTCCGAGATTGGGAACTTCACCAGCTTGATCGCTTCATCTTCCACCACCAACGATGCATTGGCTTTCGGAT TCGGCAACAACAACGGTATTCCACCTGATGCATCGTCGTTTCAGTGGCAGCACCATCACCCAGGAGAACAAGAACTAAAG TTGCAGGGGAATATTCTCAGTGCCGCCGCCGGCGGCAACGGCGGAGGATTTGGATCGTTGGATTGGCATAGCGGTGGTGC GGATCATCAAGGTTTGTTTGATCTTCCTAACACAGTTGATCAGGCTTACTGGAATCACACTCACTGGTCTGATCATGACA ATTCCACTCTCTTTCATCTTCCATGATGAGAAAAAAATCCTTTCTCCTTTTTAATTATATATAATATTTTAACTTGAAAC AAGAAGCAAAGAAACTTCAAAATCTAAACAGAAAAACTGGAAGGACTTCATATAATTAATCATGAGGTGTATAATATTTT TTTCCTTTTTTTTGAATTTGGGAGGTGATTATTGAGCTTGGTTTTTAATTAGTGATGATGTGCATGCACAACTAACTTCC ATGTTAGTTTCTGTTTGTTTTCCCTCTCTAATTTTCTGGGATTGTTATATAATATGTGTATTTGGAATTTGATTGTTTAG AGCAACAGAGAAAATATAACAGCATCAGCAGTGTTTTATTATATATTTGATTGCTGTTTAGGTTTGTAATCTTACTTTGG CTTGTTCTGTGTTGTTAAATTGTTAATCCTTCCATATATTAATTAATGTGTATGATTATAGCAGCATTCTAATATCTTAT TAACCAATAGAAACAATTAAGAAACTGAGTTAGAGTTAGGGATAACTGTTGTTTCTACATTTGAGTGAAATTAGAGTGTG AACGAATTAATTGTAATGAGTTAGAAAATTGGGAGAGTGTTAGTTGGGGTGGGGGAATGGTGGGGTTTGATATGGTTGCA TGCGCGATCATGATGATGAGAGCGCGTGCGGGGAGAGGAAAGGTCGATGGTGAATGCGAATTAGGGGGGGAGTGGAGACA CGTGGGTTAGGGTAACAAAAAACAATAATGTGATGTGATGAGTCGGTTAGGTTGGGTTGTGTTGTGTTGTGGGGTGACCT TTGCCATAGTGGATTTGGCCAATTCTCATCACTCAACATAGGAAAAACTCAAGATATGATCTGGATGGATGGAGGAGTGG TGGACAAGTTAGAGTCCATTATATTGATAGTGGAGTGTCTACTCATGTGTTGTCAGTTGTTATGTTATGTTCATGGCCAT GATGGATGCCCACCCTTGCTTTGGACCATCTTAGAAGTATAGTAGGGAGTATACAAATAATTATTAATATGTTTGTACTT GAAAATCATTTTTTAGTTTAATTGCACTTTCTGTTCCCTTATTTTGTTTGTGTAATGTGTTATTTAGTCCCTTGTTTTAT TTAGTCCCTCGACTTTTAAATTATTGCAAATTGGTCCTTCCCTTGATTTTCATAAGCATAAAATATTTAAATCTTCATTT TCTCTTCAACAATTTTAGGGTTCAAGATGAATTTGATATAGGATACATTTTTTAAGGTTAAAAAGTATAAAAATTAGTGA AATTTTTATCATTTTGAAGAGTTTTGTAAGTTTAAAGATATGAGAAGTTGAGATTTTTTATTTTTAGGAAAATGTAACAT TTTGATGATAATAGACCTTGAGAGTTTGAAGTTGAGTGAGGGACTCAATTTGCGATAATTTTTAAGTTGAGGGACTAAAT GTCGCCAAAGATGTTTGGGGGGGACTAAAATAAGTAAAACAACACATTGTCCAAATTAAGAGGATTAAAAGTGTAATTAA GCTTTAATTTTTGGGATTTTTTTTAGTCTTAGCCAAAGTATCACACATGATGCAGGTGTAGTCGTGAGTCGAGAATCCAT ACTTGCAGTTAATGCACTATGTAGGTGGTTAAACTTTTTCGTTTACAAGGCTTGTTAATCGAAACCTCTAGTTAAAGTAG ATTAGGCTTTGCTTAAGGCATACTTTAAAAAATTCAAGGTTTGAGCTTAACCTGTTACTTGCCATATGCTATTATACGAC AATTAAGTAGATCAAAAAATCTATTTGTAAACTCGTCATAAAATTTATAAGCTAACAAACTAAAATATATTAGTATTAAT ATATTGTCTAATTAAGTCAAAATAAAAAGGTCATTTATCATTTCTAAAGAGATTTACATGGTTAAATAATTATATAGTCT AACATGTTTAAACATATAAATATATTAAAAATAATAAAACAATTTATATTAATTTTATTTATTTAAATAGGCCGTGGCCT ATTAGTTTTATAAGGTTCTTTGATTGGTTTTTTTTAATTAAATAAACTTTTAAAAAAACTTAAGGCATTTTCTATTTATT AATTTGGCCTAGTCTGGTTTGTGTTTGATGTATGCTAAGTCATGAACCCTTCTCTCGGCAGCTAGAACTATTTAAATGAT GAAGTGATGAACCTGACTTACAACAATAATTTGAAGTTAATTATTGTTGTCCGGGTGCTACTAATTATGTGATAAGGATG CGTGAAATGGTGATTTCAATTGACAACGAAGCGACCGACCAATTTCCCTGTATATATTCGACATGAATGTAGCATTGCAC ATATATGCAAATATAGGAAGGTGAAAGATAAAGAAAAAAGCAATGTACAAAAGAGGAAACATGGACGAAATGGTACAGAG CGATGGGGCAAAAAGATGAGAGAAAATGGTAAGCAAACTATTACGAAGTAGCCCATATCATTTGCCAAAAAAGGATGGAT TACAGTGGAGATAGAACTGGTCCATGGCGTAGTGTTTTTAATGTGACAGAGCAGCGTGGATTGCAACTGCACCACCCATG TTAGGGACTCAGAACTAGGCACATGGTTTTCGTGGTCCTTGATTGCTATTGTGCCATGGAGTTGTCATAGTTAGCTAGCT ATATATACCTGCCCCTATTCAAAACTTACGTCTGAAACTCAACTTGTTATGCCTCTGCAAACGTTATTAATATTTTTATT ATTATTGCTCATAGCTATAGCTAGCTAGCTCAATCTTTCCATTCACGGCGTACAAATCATAATTCAACTACTTTCTTTCA TTATATTGGACAATGGAACTGAATCTGGTGAATCTGGTGATGATGTTAATGTATGGAATGACTGATATTCTGCTGCATAC TCATGATGATTTGCTACGATCTTTGCCTTTTTTGTTAATTGCGTACTAGTGCTGCTACTTTAGATATAGCTGTGCACTCC GTATTTAATGGATCGAGTGTCTTTGCTCAACGGGAGTGGTATCATTTGGACGAGGTTTTAGTACAATTAGATTCCTCAAC TAGTGTGTGTGGTTTTAAGTTACAAACAACATTTGTGCCTTGTCATTCACGTTCTTGATTTTCAATGCATCTCAATGTGA ATGGAATGGAAGAAATTATTTCTTGATTTTCAATGCATCTCAATTGGAATGGAAGAAATTATTGCGTTC
CDS sequence (LotjaGi4g1v0257200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGAAATACATCCAATCGGAGGAGGTGGCGGTGGTGGTGGAGGAAGCAGGTTCTTCGGCGGTGCTGACAGGAGGCT CCGACCTCACCACCAACAGAACAACCAGGCTCTCAAGTGCCCCCGCTGTGACTCCATCAACACCAAGTTCTGCTACTACA ACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAAAACTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTCCGCAAC GTCCCCGTCGGCGGTGGCTGCCGGAAGTCCACCAAACGCTCCAGTAAGCCCAAAAACTCTTCCTCGTCGGAAACCACCGA TCTCCAGCTGCCAGAGCCAGAGCACAACTCCAACTCTCATTCCAGTAGCGAGAGCTCCAGCCTCACCGCCGCCGTAACGG AAGCCGTTTCAGCTCCGGCGTTGAACTCCGACCCGAATTCCAACAACATGCACGAGTCGAAATTGTTGAACTCTGTTCTG GATGCGAATGCTCTGGAACAAGCAGGAACAGGGGACTGTGGCGGCGGTGGTATTTTCTCCGAGATTGGGAACTTCACCAG CTTGATCGCTTCATCTTCCACCACCAACGATGCATTGGCTTTCGGATTCGGCAACAACAACGGTATTCCACCTGATGCAT CGTCGTTTCAGTGGCAGCACCATCACCCAGGAGAACAAGAACTAAAGTTGCAGGGGAATATTCTCAGTGCCGCCGCCGGC GGCAACGGCGGAGGATTTGGATCGTTGGATTGGCATAGCGGTGGTGCGGATCATCAAGGTTTGTTTGATCTTCCTAACAC AGTTGATCAGGCTTACTGGAATCACACTCACTGGTCTGATCATGACAATTCCACTCTCTTTCATCTTCCATGA
Protein sequence (LotjaGi4g1v0257200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQEIHPIGGGGGGGGGSRFFGGADRRLRPHHQQNNQALKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN VPVGGGCRKSTKRSSKPKNSSSSETTDLQLPEPEHNSNSHSSSESSSLTAAVTEAVSAPALNSDPNSNNMHESKLLNSVL DANALEQAGTGDCGGGGIFSEIGNFTSLIASSSTTNDALAFGFGNNNGIPPDASSFQWQHHHPGEQELKLQGNILSAAAG GNGGGFGSLDWHSGGADHQGLFDLPNTVDQAYWNHTHWSDHDNSTLFHLP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 285 | 285 | 2.3E-74 | – | |
| PANTHER | 1 | 285 | 285 | 2.3E-74 | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| Pfam | 36 | 92 | 57 | 1.2E-32 | ||
| ProSiteProfiles | 38 | 92 | 55 | 29.376 | ||
| ProSitePatterns | 40 | 76 | 37 | - | ||
| MobiDBLite | 83 | 132 | 50 | - | – | |
| MobiDBLite | 96 | 132 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0257200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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