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LotjaGi4g1v0258600.3

Overview

Field Value
Gene ID LotjaGi4g1v0258600
Transcript ID LotjaGi4g1v0258600.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein kinase-like; TAIR: AT5G08160.1 serine/threonine protein kinase 3; Swiss-Prot: sp|O75716|STK16_HUMAN Serine/threonine-protein kinase 16; TrEMBL-Plants: tr|G7JU40|G7JU40_MEDTR Serine/Threonine kinase family protein; Found in the gene: LotjaGi4g1v0258600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:61402946..61407890) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGATGCTCATTCTCCGGCCTGAACGCATTGTACGACTCGGTGAACGGCGGTGGTGACGTTTGGATCAACGAGAATCG ATTCCGCATCGTCAGGCAGCTCGGTGAAGGTGGCTTCGCCTACGTCTTCCTCGTCAAGGAGGTGCCTAACGACTCTGCTG CCGGTGGCCTTGCTAATAAGCTCAAACACTCTTCTCACATCTCCGGTTTGCTTCGTTCCTTCAATCGCTATTTTTCTTCT TTCTGAATTCATGAATTCAGCTTTGTTAATCCCGATCTGTGTGATTCTTTGCATTTTGACTCGATCTGCGATGGCATTTT CATTCGTGGAATTAATTTGCGATCTGTTACAGTTGATTTCTGATTCGTAGGGATTTTCGTGTAGTCCTGTTGTTGCATCA AATGTAGAAGTGATTTTGTTATGAAAATTGCGTTGAATATCGTGTTTCTCGCTTTGATTGTGATTCTTTCATTCTCTTTC AACATTGTTCTATCTTGTTAGTAGTGTAGTTTTGATAATCAGCTGTGATAAAAAGTTCTATGTCATTGCAGTTACTAAAA ACTTGATACCATGTGATTCCGTGGATTTGAATTAATCCGTCGACTAAAATCTGTACTATATATATATTTTCGCTTTGCAG ATGACGGGAGTTATGCTATGAAGAAGGTCCTGATTCAGAACAATGAACAGCTGGAGTTGGTCAGGGAGGAGATCCGCGTT TCGTCATTGTTCAATCATCCCAATCTGCTCCCGCTTCTTGATCATGCTATCATTGCTGTGAAGGTAAAGTAGTTATTTCT GCCCTCCTCTCCTTATTGTATCACAGTTCTGCATTTTTTCAGTCGATATAAATTAGTTGAAATAAGAGCATTGTTGGTAT ATTCTGGTGAGACATATCCCGTGATCTGACACTACGCTATAATGTTTATGCTGTACTGTATCCTTGGATTCAGGTCTCTC TATATACTTACCTGAAAAAGTTGTACAAACATGCTATCGGGGTTTATGGACTTGGCTGTTTTATTTCCAATTGTTATGCA TGACAGGAATAGAATGCAACCTCACTTAGGTGAAGGTGGCAACTTCTAGGGGCACTTGAGCTGTAACTTAAAGGATTTAA ACTTTAAAGTGAAAGTGTTCAGTATTCTCTTGTAATTTGCTTGTCATATTCACTGTAAAAAAATTCTATGGTGAAAAATG AAACCACATGTGTGGATCACGCTCCTCCGTTATTGATCATAATGAACATTTACTTACTAGCTGAGTAATTTAGTTTGTTC GCTTAAGTTCCTGAATTCTGGGCTCTACCTCATTTGCTGTTAGGATTTGTAATGTTAAGGAGAACAGTGTTTTTACTATC TAATTTAATGTTTCTGAGATTCATACATGCATATGCATTTCCTGTATTCACTTCGAGTAAAAAAGACATGTTTATTATAT CTGTTGTATTTAGACTACATTGAACAGTCACATATTTTGGCCATAATGGTTTTTTCTTTCTCAATACTAGTCTGTCTTGC ATGGGTAAGATGATATCATGTGATGTTTCTTGGTAAGGCTCAATGAAAATGTGTTGAAATTTATGATTGTGAAGAGATTA TAGTGATCCATGATTAGTTGATTACAGCTTTTCAAATGTTAAGTACTGGTTGAGACTTGGTATATCATGGCAAATTGATC TCAGTCTATTATTCAGAAATTTATAATTTTATTTATTCTCTAAAATAAGCTTTTTAATGCGTGTATAATGTCGTCTAAAT GTCTGGTACAGTGCTTAACTTAATCATTTACCGCGGGAATGAAATTCTCTTAATGTGGGAATGTGTAGCTTTTTTGTTTA CCTTCACTGTTGTGGGTTTACTTTGTCCCTTCCCCTGTTTCATTTTTTTTAATATTTATGTAGAATTCTTTTTGTTAGCA GCGTACCCAGGAAACATCATGGACCCATGAAGCTTACTTGTTATTTCCGGTTCATTTGGACGGAACATTGCTAGACAATG CCCAAACAATGAAAGCCAAGAAGGAATTCTATTCTACCTCTGATGTTCTTCAAATATTTCAGCAGGTAAAATGAACTCTC TTTCTATTATGAACTTCTTTCATGAGGTGAGAGGGGATCAGGGACCTGAAGCATCACTATGGCAATCGCACCTCAAGATT TTCTGCACATATATCTTTCTTCCTTTCTTAAGTGTCTCCCACACACACATCAACACATATTAATATAAACTTCACAATTC ATGTGACATAGGTCATTTGTTGTCTTAAGAATCTTATTGTAGAAAATGATAAATGAATTTCTCTGGTCTGCTTCTTTAAA ATCTATCTCAGAAACAGTTTTATTACCTTTTAGATAAAATGCTCTTTTTAACATTTTAGGTTTACTGTTCCTTTAAAATT GTAGATATTGTTTTATTCAGAGGCCTCTTTAACCCTGTAAAATTAACTCAACAGCTTTGTGAAGGACTAAAGCATATGCA CAGTTTGGAACCTCCATATGCACATAACGATGTTAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAACCGCCTC TTGCCATACTGATGGATTTTGGCAGTTCTCGTCCTGCTAGGAAGCAAATTAGTTCCAGATCAGAGGCGCTTCAGTTGCAG GTGATCTTTCTTCCCCTTTTATTAATTGTTGTTCATACATAATAGTCCATTGCTGTTTCAATGTCTTAGCACTACCACTT CTTGCGTTACTGGTAATTTCTTTAATACACAGCACACAATATATTGCACTTATATCACATTTGGAATGTTTTATGAGGCT TTTGCTCCATTTGTAGTTTGCGAAGTTCTATTTCCTAATATGGTAGGTGGATCTTTTGCACCATATGCATCATCATTCAG CAGGCTAGTAATGGATCTTTTTAATTTATTAATGTACTTAATCCAATTCTGTGCATCGAAAAATACTAAATTGCTTAGCT TAGAAGTTCATTTTGGCAGAGTACTAATTCTTCTAATAGTTATCTACTCTGAATAGTTTTTACAAATATGTTTCATTTCA GTCACCTGGCTCGGATTTTCTAACCTTCTAATTTCTACTTGTCTTCCTATGTAGGAATGGGCATCTGAACATTGCTCAGC TCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGTCATGCTGATATAGATGAGAGGACTGATGTTTGGTCACTAGGAT GCACATTATATGCGATAATGTGAGGATTACTCCATTTGTATGTGTTTATGTTTATTTTTATGTTTAGATCTTCTACTAGC CATGCCTTGATGCTACATGATAACCATATTTTGGTCAGTTTTTAATATTTCTGCTTTTAATTTGACTTACTGCTTCATGA ACATTTGTTTCATTTGTGTAATATAACTAATGCATTATCTGAACGTGTGTGTACATACAGCCCTATAAATTAACAGATAG TTAGAATTTTAAGGAGCATGGTGTCAAGTAACCACTTATCCCAAAAGCTTAAGCTGTTGGGTAAGGGCCACTTTAATGGA TTTATATTATATTCTAACACGCCCCCTCACGCAAGAGCCCTTTGGGCTTGAAGCGTGGATAAATGCCCAGGCCCGCCTAC CATGTGCTTAATTAAATTCCACTTTTTAATTAGAAAGTGAGGGGAGCAAGGATCGAACTCTAGACCTCTCAGTCACAGAG GCTCTGATACTATGTCAAGCAACCACTTATCCCAAAAGCTTAAGTTATTGGGTAAGGGTCACTTTAATGGATTTATGTTA CATTCTAACACATGGATAAGGCTGTATATTTTTAATTGGTTTCATTATCAAAGCTACTCTAGGACCATCACCAGCCAATA TTGTTTTTATTGGCTTTGCTACATGTGTGTGTGTGTGAGTAGGTACCCACCATTTTTTTTTCTTTGGGGTTGGGGGGGAT TGAATCTAGTTTCAAGTTTCAGCTAAACAATGAGAGTCCGAGTTTGAATCTAGTTTCAAGTTTCAGCTAAACAGTGAGAG TATCTGATTTGTCTTTACAGTGAACAGACATGCATGGAGAATTTATATGTCTTTGTTTCTGGAGCGTAGCCTATAAAAGA ATAGAAAAGGAAGGGACGAGGGACAATAATTTACTTATTTTTATGCCCTGACAAAATTCTGTCATAACAGATGAGATGTT AAGAGCACTGAGCTTCCAAAGAGGGCTATTGGCCACCTGACCATTAGGTTTAATGGAAAATCTTGCTTATGAACCAGAGT TCTTCCAAATTGTGGCATGTTTGTGTGAAAGTAAGTTACAAAATATATTAAATAATATTATTGTGTTTGAGTAATGCTAC TCAACCAACAGTGAATACAACAGAAAAACACATCCATGCTCTATAGGTTATTGATTTGGAGCTATGCTCACATCAAAACT TCTTTGCAAGTCCACCTGAAATGAAATCCTATGCCTGTGCATATTAGCGTAGCTTTGTTGTCTAAGGGTTGTTCCCTTGG CGTTATCATTTGATTTGGCACACCCCAGAATTTCAATATTAGAGGTGTATCTTTTATTGGACACAAATAGTTGTGCTTAT TTACAGTATTTTACTCTTTCAAGTAACAAACTACTTCCATCTGTACCATCATAATGTTTGACTCTTTTTGTCTTTTGGTA TTAGAAATATATGTTTGCAGCTTTAGTAGTTTAGTTTACATACCAAATTGTTTATTGTATCACCTGGCTGAATTTTCAGG TATGGTGTATCTCCATTTGAGTATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATTGTAAATGCTCAGATCAA ATGGCCAGCTGGACCTAAGCCTTCATATCCAGAAGCTCTTCGTCAGTTTGTGTCATGGATGCTTCAGCCCCAAGCTTTTA TGCGGCCCAGGATAGATGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTTGCTAATTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0258600.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGATGCTCATTCTCCGGCCTGAACGCATTGTACGACTCGGTGAACGGCGGTGGTGACGTTTGGATCAACGAGAATCG ATTCCGCATCGTCAGGCAGCTCGGTGAAGGTGGCTTCGCCTACGTCTTCCTCGTCAAGGAGGTGCCTAACGACTCTGCTG CCGGTGGCCTTGCTAATAAGCTCAAACACTCTTCTCACATCTCCGATGACGGGAGTTATGCTATGAAGAAGGTCCTGATT CAGAACAATGAACAGCTGGAGTTGGTCAGGGAGGAGATCCGCGTTTCGTCATTGTTCAATCATCCCAATCTGCTCCCGCT TCTTGATCATGCTATCATTGCTGTGAAGCGTACCCAGGAAACATCATGGACCCATGAAGCTTACTTGTTATTTCCGGTTC ATTTGGACGGAACATTGCTAGACAATGCCCAAACAATGAAAGCCAAGAAGGAATTCTATTCTACCTCTGATGTTCTTCAA ATATTTCAGCAGGTTTACTGTTCCTTTAAAATTGTAGATATTGTTTTATTCAGAGGCCTCTTTAACCCTGTAAAATTAAC TCAACAGCTTTGTGAAGGACTAAAGCATATGCACAGTTTGGAACCTCCATATGCACATAACGATGTTAAACCTGGTAATG TTCTCATAACACATAGAAAAGGACAACCGCCTCTTGCCATACTGATGGATTTTGGCAGTTCTCGTCCTGCTAGGAAGCAA ATTAGTTCCAGATCAGAGGCGCTTCAGTTGCAGGAATGGGCATCTGAACATTGCTCAGCTCCTTTCCGAGCTCCTGAGCT GTGGGATTGCCCAAGTCATGCTGATATAGATGAGAGGACTGATGTTTGGTCACTAGGATGCACATTATATGCGATAATGT ATGGTGTATCTCCATTTGAGTATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATTGTAAATGCTCAGATCAAA TGGCCAGCTGGACCTAAGCCTTCATATCCAGAAGCTCTTCGTCAGTTTGTGTCATGGATGCTTCAGCCCCAAGCTTTTAT GCGGCCCAGGATAGATGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTTGCTAATTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0258600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGFAYVFLVKEVPNDSAAGGLANKLKHSSHISDDGSYAMKKVLI QNNEQLELVREEIRVSSLFNHPNLLPLLDHAIIAVKRTQETSWTHEAYLLFPVHLDGTLLDNAQTMKAKKEFYSTSDVLQ IFQQVYCSFKIVDIVLFRGLFNPVKLTQQLCEGLKHMHSLEPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSSRPARKQ ISSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQIK WPAGPKPSYPEALRQFVSWMLQPQAFMRPRIDDIIIHVDKLIAKFAN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45998:SF3
1 170 170 3.1E-196 –
PANTHER
PTHR45998
1 170 170 3.1E-196 –
Gene3D
G3DSA:3.30.200.20
10 134 125 1.3E-25 –
SUPERFAMILY
SSF56112
20 357 338 1.45E-43
IPR011009
CDD
cd13986
27 363 337 5.25758E-141 –
SMART
SM00220
28 362 335 2.7E-17
IPR000719
ProSiteProfiles
PS50011
28 362 335 29.898
IPR000719
Pfam
PF00069
65 357 293 2.2E-25
IPR000719
Gene3D
G3DSA:1.10.510.10
183 365 183 1.3E-38 –
PANTHER
PTHR45998:SF3
184 366 183 3.1E-196 –
PANTHER
PTHR45998
184 366 183 3.1E-196 –
ProSitePatterns
PS00108
204 216 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0258600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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