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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0270900 |
| Transcript ID | LotjaGi4g1v0270900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SPX domain-containing family protein; TAIR: AT5G20150.1 SPX domain-containing protein 1; Swiss-Prot: sp|Q8LBH4|SPX1_ARATH SPX domain-containing protein 1; TrEMBL-Plants: tr|I3S3A7|I3S3A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0270900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:63681795..63685104) extracted from Lotus japonicus Gifu genome v1.2.
TAATTGCATAATTGTCAACCACACACATCCAAGGAAGACAAGTCTCAACATTGAACTTTTATTCAATTAAAAAACTTCCA AACTCAACAAAACACAACCACCACTCCACCGTCACTAAACATAGATCATATAAGCACAGTAGCAGAGAGAGAAAGATAGA GAGGAATAAAACCTGAAATATACTCTTTTTACGGATATTCCAACAATACCCTCCGAATATTCCCTCTCTTTAACGGTTAT ATTACACACCACTCCCTCTCTCATCTTCCTCTATTCCATTCTTCTTCTTCTTCACAACCACACTCTCATACACAGAAAAT TTTAATTTTAATTTTAATTTTAATTTTTGTTTTCTCTGGTTATTGAAAATCGATGAAATTCGGGAAGAGCTTGAGCAGCC AGATCGAGAAAACCCTACCGGAATGGCGGGACAAGTTCCTCTCCTACAAGGAACTCAAGAAGAAGCTCAAGAACTTCGAA CCTGCCGCCGGCGGAGAGGACCGCCCCGCCAAGCGTCTCAGGCTCGACGTCGCCGGAGATATGTCTAAGGAGGAGACAGA TTTCAGGAACTTGCTGGAGAATGAACTTGACAAATTCAACAATTTCTTCGTTGAGAAGGAGGAAGAGTACATTATAAGGC TCAAGGTAAATAAATCTCACTCATCAAATTCAATTTTTTTTCCTTCTTTTAAATCAGATCAGAATATTTGTTACTTTATA TATTTTTATTAGGGTTGATTTAATTTAATTAGTTATACTGAATGTATTATTTGTGGAATTTTAGAAATAAAATGGTTGGC TAAGAACGAATTTTGATGTGATAAAATAAAATAAAATATGCTGTTTCCACTAGGCAATTTGGTAAAGTGAAGATTCTAAT TGCAACTTGGCAATGTTAATTTGTCTTTGCTTCTCTACAAGATAGATATAGATATCACTGGTTCTTTTTTAGCCATTCGA ATATTTATGGATAATATTAATATAATAACCTTACTTCAAGCATATCAAATTACAAATTTAATATTTATATTCTTTGTTAT TGATATTTATGAAATAATTTGGTAGACACAATGTTTCGCTTGACATTGTCAAATTCACTTGAGAGAATCGTAATCGGTTT TTGGATGATAGGAAGTAAGAGAAGTTGGGTGTGTGACTGTTGATTAATGTGTGTTATGGTTGAAATATGCAGGAGTTGCA AGATAGAGTGGCCAAAGTAAAGGCTTCTAGTGAACAGATGATGAAAATTCGCAAGGAAATTGTGGATTTCCATGGAGAGA TGGTGTTGCTGGAGAACTACAGTGCCCTTAATTACACAGGTACTTACAAGTTACAACTATCAGCATATTTTATGTTAAAT ATAACAAATTACAACCTTTACTTGTTAATAGAGGCGCAAAAGCGCTATAGCGTAGCGCCTGGGGTTCACCGCTACTCCAC TATTCACCGTTATATGCCTCTATAGCGCTACGCTATGCTATCCACTATTAACAACCCTGGTTTAAACATGTCTCAAGTCC ATTTTAGAATCATGACATTTCTCAATACAATTGGAAAGTATAGACTATAGAGTAAAGTAATATGATAGAATAGGATTCAT TTCCAATACAATTCTTTGGGACAAGTTGGTAGGACCAAAGAATATGCTTCTTCTGGAAGAAAGAATCTACTTTGGACATA TGCATGCTTCTGAAATTGAACATTCTGTCCTTTTGATAGCTCTTTAATGGCTTCTTGTGCTTTCTATGTTCTTCGTAAGC CAATTCAACAATAGTACGGTCCTTAATGTTCGAATTATATATGATACTTATCTTCATAAATATTCCTCTTCGAAGTATAC AAACGTCCACATCATGTAAAGATTGAACAATCAAACATAACTCTTTTTACCAGTTACTCCAAAGTGATTCTGATTTGAAA ATGTTACAAAAGCACGTGGAATATGAACAAGAGCCTTGCTAATTACTTTCTTTTGAATTTTTAATGTAATAAATCGTTAT CTTTTCATAATGTTGTGGAAAATCTCCACATGGTGGATTGAGAATGAGATGAGAACACAACCAAAAGCAGAGAAAAACAT GGGATAACAGTAATGTTCAACGTGGTTCGGCATTTCTTGCCTATATATATGAAATACCTTAACAAATATTCACTACCTCA TAAAGGATTGCAAGTTTTTTAGACAAACTTGAAAAATTCACCCTATATTGTGTATTCCCCCTGCCCTACAAATGAAGATT GGTTTATTTGGTTAATATGAGGATAAAAGAAGATTGTGTTATGATGTTTTCTTCATTTTTAAGATCAACAGGCTCATAAT AATTACCTCAATTTTCTTTCCACAGGGCTAGTGAAAATTCTGAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGATT GCCTTTCATTCAGAAGGTCCTGCAACAACCTTTCTTCACAACAGACCTGCTCTACAAGCTTGTGAAGGAGTGTGAAACAA TGCTGGATTACCTTTTCCCTGCGATTGATCTCGCAGCTTCTGGCGAGACAACTCCACAAGCTGAAGTGTTTGATCCCTCA ACTTCAACCACTACCAAGAGTGATGGCTTGCTGATACCTAAGGAATTAGCAGAGATTGAGTACATGGAGAGCCTTTACAT GAAGAGCACTGTATCGGCTTTGAATGTTTTGCAGGAAATTAGAAGTGGAAGCTCAACAGTTAGCATGTTCTCATTGCCAC CATTGCAGTTAAGTGGTGTGGAAGAAACATGGAAGAAAATACCGGTGCTGGAACAAACAGCCAAGTAAGTAACCTGCTGG GTTACTTCCATGAGGGTGATGTAGTGGATTGATATTTTACACTTTCTTTTTTCTTTTAAATCAGAAGCCTCTGTTATGCA ACAAGCCTTAGATACTAACACAGATGTAAGATGCTGAATGTAAAGATGGAATTAATTTTACAGAATTGTAGGTTCCATAC AATAAAACCTCTAGAATTAGAAGAAGCTATGTTTTGACATTTTGCTTATTCAATATGTAATGTATTTATATGTTATGTAT CTGCTTGATACTATAAACTTACCGGATGTATTTGGAAATCATTCTTACAGTTTTTACATTTGATGATAATAGATCATCAC ATACTAAGCTGCAACAATGTATATAGAAACATCAAATTCTCACTCATACAAAGTTTGCTTTAGCTGCTCTCAATGGGGAG GCTGTGAAAGCAACTTAATTAGGCTACTCTTCCACACACAGAAACATTAACAATTTAACATACACTGAAAAATAAACCTC AATACAGCGTAGCAGTAATGTGATTTATAC
CDS sequence (LotjaGi4g1v0270900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATTCGGGAAGAGCTTGAGCAGCCAGATCGAGAAAACCCTACCGGAATGGCGGGACAAGTTCCTCTCCTACAAGGA ACTCAAGAAGAAGCTCAAGAACTTCGAACCTGCCGCCGGCGGAGAGGACCGCCCCGCCAAGCGTCTCAGGCTCGACGTCG CCGGAGATATGTCTAAGGAGGAGACAGATTTCAGGAACTTGCTGGAGAATGAACTTGACAAATTCAACAATTTCTTCGTT GAGAAGGAGGAAGAGTACATTATAAGGCTCAAGGAGTTGCAAGATAGAGTGGCCAAAGTAAAGGCTTCTAGTGAACAGAT GATGAAAATTCGCAAGGAAATTGTGGATTTCCATGGAGAGATGGTGTTGCTGGAGAACTACAGTGCCCTTAATTACACAG GGCTAGTGAAAATTCTGAAGAAGTATGACAAGAGAACTGGTGCTCTCATTCGATTGCCTTTCATTCAGAAGGTCCTGCAA CAACCTTTCTTCACAACAGACCTGCTCTACAAGCTTGTGAAGGAGTGTGAAACAATGCTGGATTACCTTTTCCCTGCGAT TGATCTCGCAGCTTCTGGCGAGACAACTCCACAAGCTGAAGTGTTTGATCCCTCAACTTCAACCACTACCAAGAGTGATG GCTTGCTGATACCTAAGGAATTAGCAGAGATTGAGTACATGGAGAGCCTTTACATGAAGAGCACTGTATCGGCTTTGAAT GTTTTGCAGGAAATTAGAAGTGGAAGCTCAACAGTTAGCATGTTCTCATTGCCACCATTGCAGTTAAGTGGTGTGGAAGA AACATGGAAGAAAATACCGGTGCTGGAACAAACAGCCAAGTAA
Protein sequence (LotjaGi4g1v0270900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFGKSLSSQIEKTLPEWRDKFLSYKELKKKLKNFEPAAGGEDRPAKRLRLDVAGDMSKEETDFRNLLENELDKFNNFFV EKEEEYIIRLKELQDRVAKVKASSEQMMKIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQ QPFFTTDLLYKLVKECETMLDYLFPAIDLAASGETTPQAEVFDPSTSTTTKSDGLLIPKELAEIEYMESLYMKSTVSALN VLQEIRSGSSTVSMFSLPPLQLSGVEETWKKIPVLEQTAK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 280 | 280 | 2.0E-127 | – | |
| Pfam | 1 | 36 | 36 | 2.7E-10 | ||
| ProSiteProfiles | 1 | 156 | 156 | 28.164 | ||
| PANTHER | 1 | 280 | 280 | 2.0E-127 | ||
| CDD | 2 | 145 | 144 | 5.60787E-87 | – | |
| Coils | 83 | 110 | 28 | - | – | |
| Pfam | 105 | 158 | 54 | 1.0E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular response to phosphate starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate. |
Expression pattern of LotjaGi4g1v0270900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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