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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0283300 |
| Transcript ID | LotjaGi4g1v0283300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT4G02050.1 sugar transporter protein 7; Swiss-Prot: sp|O04249|STP7_ARATH Sugar transport protein 7; TrEMBL-Plants: tr|A0A1J7I8D9|A0A1J7I8D9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0283300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65525900..65532455) extracted from Lotus japonicus Gifu genome v1.2.
AGTAGTAAAGTTCATAAAATCGTTATCTGTCTTTATTGGAGCAAAGGTTGGTAACCTCAACAATATAAATTTGAAACTTT AAGAACAATGTTGATCCATAAAGATCAGAATATTTTCTCACAACCTCTCACCTTAGAAATTAAGTGTGATCTGACTCTGA GAAAAAGAGAATTCAGGAAATGGCAGGTGGGTCTTTTACAACAGGTGGTGGTGTGGCTGAGGCGAGGGCAGAGCAATATA AAGGAAAGGTCACTGTTCATGTCATCATCGCATGCATTGTTGCTGCCACTGGTGGATCCCTCTTTGGCTATGATGTTGGG ATCTCAGGTGCTCTTATAATCATTAATCAATACTCTGAATCAGAAATTTTCATGACTTCAATAGTTTTCACTTTCACATT CTTCTGCAATCAATTCTCTGGATCAAAATTTAGATACTCTTTTTTTTCATTACACAAGAATGATTAAATTAAGATATAAG AACTTTCTGTGATTGAAAGCTGAAACAAAAAAGTTTATCAGTGAAATGCATGATATCATGTCTTAGAAATTCAAGATTCC ATGACTTTATTTCATTCTGTTCTGTCTGCACTCTGCACTAACTCTTATTAATTTTGAAATCTGAAATGCAATCCCCCCCT TCCCTGATTTTAATATGCAACTCTTAATTATCATCTCAGTATTACAATTAAAACCAGGTCCAGGCAGTTTTTTTCATAAA ATCTCTAATGCCTAGCAGTGATGGTAAAATAATAACCCCACATTGAATGGCATCACATGAGCTTTTGGTTCTGTTCTTCT ATATCCAATTGTGTCATCATATTCTTGTAATCACCCAACTTGTGCTCTACCTGAGATGGAAAATGTTTGAAATCAAATTC AGGTAAAAGATATCAACAGCTATCTATAAATTACTGATGCTAGAGGAGACGTGAGAGAGACTCATTTCCTTTCTTATCCA TTGTTCAACAATTATGGTCCACTTAAACTTTTTTAAGATTTTATTTCTTTCTCAAATTTCGCCCATGAATGAATTTCAAA ATATTAGTGGAGGATATTCTAGAAAAGCAAAAAAGGGAAGAAAAAAAAAACAGCTACTATAAAGCTCCCGCTATGTGTGA GGTCCATAGAGGGGCTAGATCCACTTTGTGGATCTAATGTAGACAGTCTTACCTTGTATTTTTGCAAGAGACTGATTTCA CGACTCAAACTTGAACCGCAAGCAGCAACCTTACCGTTGTGTTGAGGCTCTCCCTCATTCTAGAAAAGCAAAATAAAAAT AAAAATAGTAAATAGTATAATCTTTATAGTAATTTATCAGAAAACTTCTTTGACATGTGTAGTGGTTTAACAGGTGGAGT TACTTCCATGGATGACTTTCTTCAGAAATTCTTCCCCTCTGTATACAAGAAGAAAATGCACGCACAAGAAAACCACTACT GCAAGTTTGACGATCAGGTCTTAGCGGCATTTACCTCTTGTTTATACATTGCTGGTTTGGTTGCATCCCTGGTGGCATCT CCAATTACAAGGAAGTATGGGCGCAGGACAAGTATCATAGGTGGTGGTATCAGCTTTCTCATTGGAGCAGCTCTAAATGC AGCAGCAGCTAATCTGGGAATGCTTATCGTGGGTCGGATTATGCTTGGTATTGGCATTGGATTTGGAAATCAGGTAATAG CATATTTCTATAACTTTAGAACATACAAGCTTTGTGTATATTTAAAAGGAGCAACCGCGATTCCTGTTTAAATTAAAACC AACACTAGAGTCTAAATAGCAGAAGGGTAGCCTTGGCACAACAGTAAGAAGTTGTTTCCATGTGACTGAGGTCACGGGTT AACGTCATGGAAGCTGCCTCTTTGTGAAAAACAATGTAAGGCTGCATACAATAGCAGTGGTCGGACCCTCCTCCGGATCT CGCGCATAACAGGACCTTTAATGCAGTGGGATGCCCTGTATTAGAGTCTAGATAGCAAAAGTGACTTTGAGAAGTGAGTG CCAACAGCCCAACACTATGTGATTGTTAACATAAGTCCACAAAATTTTACAGGAAAAAAAGTAGTAATGTGATGGAAACA GTCAATGGTGCAGTAAAATATGTTGAGTTAGAAGATAATCCAGTTATACCTTGAGAAATTACTATAGCTACTCCTCTTGG TGGTTTTTTTGAAGGCTGTTCCACTTTATTTGTCAGAGATGGCGCCAACCCACCTTCGAGGAGGCCTGAACATGATGTTT CAAGTAGCAACAACTTTTGGGATTTTCACAGCAAACATGATCAATTATGGCACACAGAAGATTAAACCATGGGGGTGGAG GCTGTCTCTTGGCCTAGCTGCAGTACCGGCTCTGTTGATGACTGTTGGAGGGTTATTTCTCCCTGAGACACCAAATAGCT TAGTAGAACGAGGATCAAAGGAAAAAGCAAGGAAGCTTCTTGAAAAAATCAGAGGAACAACTGATGTTGACGCAGAGTTC CAAGATATGGTTGATGCAAGTGAGTTGGCTAACTCCATCAAGCACCCCTTTCGGAACATCCTTGAAAAAAGATACAGGCC AGAGTTGGTCGTGGCAATCTTCATGCCCGCATTCCAGATACTGACCGGCATAAATTCAATTCTCTTCTATGCTCCAGTGC TGTTTCAAAGCCTGGGATTTGAGGGAGACGCATCTCTCTACTCTTCAGCCTTGACTGGTGGAGTTCTTGCTTTTTCGACC TTCATTTCCATTGCAACAGTAGATAGATTGGGCAGGAGACCCCTACTCATCAGCGGTGGAATACAAATGATCATATGCCA GGTAAAGAAACAAAGAAACTACAGTTTAATGCAAATTTCAATTATGCTTACAACTTACAAAATCCATGAATTTGGGAAAT ACCACTATAGAACAAATGCTCTCAATCAGCATGTATAACTGCATAACTCTAGAAAGATAAAGGGGCTCACTTTCCTAATA TAACAGCTTTGCTACCTGAAAATGATGAGATTAAGGGAGAAAATGGTAGTATACAGAAGCAGTTTGCTAAAGCAGAGGAA AAGTTTAGCTTATATTTGCAAATCCAATTGACTATAATTTTGTTTTTCACATGAGCAGGTTATAGTAGCCATAATTTTGG GAATCAAGTTTGGAGAAAATCAAGAATTGTCCAAAAGCTATTCAATATTGGTTGTAGTCGTTATTTGCCTATTTGTTCTG GCTTTCGGATGGTCATGGGGCCCACTTGGCTGGACTGTTCCTAGTGAGGTGTTTCCATTGGAAATCCGATCAGCAGGGCA GAGCATCACAGTTGCTGTAAACCTTCTGTTCACTTTCATAATTGCCCAGGCCTTTCTTTCGCTTCTCTGCTCCTTCAAGT TTGGGATTTTCCTGTTTTTTGCGGGATGGATTACCATCATGACTATATTTGTTTCTGTGTTCCTGCCTGAAACCAAAGGA ATCCCCATTGAAGAAATGACATACATGTGGAGGAGACACTGGTTCTGGAAAAGGGTACTGCCCCATACAACTGAAGATAC CAAGTGAAAAGTTCCAGGGAGTCAGGGTGATGCAGTTCAACCATCACAGACCCCAACAAGTCAACAACAGCTCATGATAC AGTATAGAATTGAAATTTCAGCTAGTTCTATAAAGTGTAACCTTCGTCTGGTGTAGTTAAGTTAAGTAACCTAAACAAAT ATAAATCTAGTTAGTAAAAAAGGACAATATAAAGAAGTCTTCTGTAGAAGAAAAATGAGAATGGCAAATTAGTAGTTAAT ATCGTGCATAAACAAGAATCTTAAAGTTATCCTTGTTTGTTGCTCATCTAGTAATCTCAAGCATAGCAAGATACTGGACC AAGCCATAAAATGAATAAGGCAGGCAGACACCCTGCATAAGTATTTTTGTGAAGAGAAATGGTAATAATACATTAACACA GTTTTCTTACTGCGAAAATTTTACGCGAGGCTCACTAAAATTTTAGGCTTACTCTGTTCAGTGATGAGACAAACTGTAGA TTTGGTATTTAAAAAGTACAACAACTGCAAACAACTGCAATGAAAATTGATGCAAATATTTAATCAGGAATTGGGAATGG AGCACATATATGCAGATAAGCTAAGCATGAGTAACAACTGCATATCATAGAAATACCAATTAGGGCTCCCGTTCGAACCC ACCGAAGAATTCAGCAGTTTGGCTGACAGCGGCCTCTACTGGATTAACTGCTCTGCTAGGACAAATCATAATTTGTGAAT GAAATTCGTCCCTGAAAAATTTAACCATTGGACACATTAGTTCCTTATAATGCAAAAATCACACTCGAAATTCTTAAAAA TCATATTCATTGGTCATATTCCTTCTCAAGGGCTATGTGTCCCATGTGTAGGGACTAACATAACCAATATCTGAGAATTT TTTAGACTAATGGCATGTATGGTTTGTCATTTGGGCCTCATTTGCAACACTCGAGATCATAAATCACCAGTTCCAAATGC TCAACGTGAAAGGAGAAATTGAGTCCACAGAAAACCAAAACACTAAGACGACACATACATTCTCAAGACTACAGCATCCG ATTGGAGATTCAGTTCAGTTTATAACATGGACGAACTTACATCCCAGTTCACAATAAAAGTTCGGTTCATGTTATATAGT CCATTGGCATGATGAATGCCAACATAAGCTATGTTCCGACACCCATTGGTGCCAGAGGTAAACGAACATTAACATTCACT TCGAAACGAAAGGTTAACGGAATTCTTCTTATCGATTGAAATGAAACCGTTTACTTGTATCCAAAAAAATCATAGCCCTA CTCATAATGTGTGGAAAATGGCATGTCAAAGTTCATCATTAGTATTCCTCATTCAGCAATTATGCAAAGCAAATTGGAGG ATCCACCTGGTCAAGTCAGAGCTTGTGCACTTTAATGGCAAGTTTAGTTTCTCATGATCCTAGTTACATTGCAACATGAC AGCTATGAACTGAATTTTCTGTGAAGATGAAATTAAAACAATGATTTCCTGAAAATTCTGTAAGATCAATGCAAAAGCTT CACATGATGTAAAGGAATCTACTTCATATCTACACCCAAGTAAAATCAGAAAGTGAAATGAGGATTAACTTGAATTCCTA GATACTTCAACTCGCCTTCCAACAACAGCAAGGAATTAAAACTCTTGAGCATTAAGGAATCTGAAACTTCGAACCATCAC CGGTTGCAGAATCCAATTCCCTTAATCCACCAGATCACATATGAATAAAAACAAACATAACAAGAAAATAAAATGAGAAA CCAAACAGTTCTTCGCGGTAATGGTAAAGATCAAACTGGAGAAATGTGCAACAAGTTCTTCTTCCATTCAAATGTCTAAA TACATACACCAAAGAGGAATAACTATGTCAAATTGACAATTCAGATCAGAATAGAAAAACAGGATGCTGCTAATTCTACA AATTTTATTCTATTGGAATTAAATTTCACAACTAAACTTGTATGACAAGAACAAATCAAACAAAAGCCTGATAAACACAA CACACACCAAACTATCTTCTTCCATATGGAAATCCCACACCTACACTAGACTAGACAATACTAGATCGATTCACGTATAT CAGACTAGGGGAATTTACAAGAGATTCATTCTCCTCTTCTAACCCTTCTGTCATCAACGTATGAACTAACACTAGTACCT AACTGACTACGCCCCCTTACAGGAACTGAACATCATCACATCTTCATCATTCTAACAATCTTCGCTTCACTTTCAAATTT CTTCATACACTCGCGCCAAACGTCAATCCTCTTGAAAAAATAAAGGAAGCACGTCAAGGACCATGCGAGTAAACCTAATT AAGGAGAAAAGTACTCAGAAACTCCAAACAACGAAGCATCATTCCAAATCAAGCCGCAGCAACCGCCTCAAATCACTCGT CGCCGTCGCCGCTCCGTTCTTCCACAAAAACAACGGAACCGGAACGGAGCTCGGAGGCGGAGACGAGACAAACGCCGATC CGGCATACATCCCGTCCTTCGAATCACAAACCCTAACCTGCTCCTCCACGGTCACCGGATCCGGACCAAGCCGATCCGTC GAGCACAACATCAAATCGAGATCCTCCTCCTCGTTCTTAACCTTGTGGTTCACCGCGGCGAGTCCTCCGGGGATATTCTC CGGGCTCAACTTCTCGCCTCTTTTGAGGATCTTAACCTTTTCCATGACGAGATTCGCGGCGTTCGGAGACTTCGCCGGAG GCGACGATCGATCGCCGGAACGTCTCCGGTCACGGTCTTGACACTTGGCCTGAACGGCGGCCACCGGACTCCGCTTCCGG CGGCGGTTCTGGTTGGCATGGGAATTGAAATTAGGGTTAGGGATGGAGTTTTTCCGTGATTTGACGTGAGAGGTTGCGAT GGCGAAGGCATCGTTTGGGAGGAACTGGCCTCGAAGGCAATCGTGGGAACGAAGAATTGCAGTTCCCATTTCTAGAGAGA GAAAGTAGAGAGAGAAAGAGCGGAAACTGTTTTGTTGAGAGAGAAAGTGCGCATTTGAACATGAATAGAAGCAGGG
CDS sequence (LotjaGi4g1v0283300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCCAACCCACCTTCGAGGAGGCCTGAACATGATGTTTCAAGTAGCAACAACTTTTGGGATTTTCACAGCAAACAT GATCAATTATGGCACACAGAAGATTAAACCATGGGGGTGGAGGCTGTCTCTTGGCCTAGCTGCAGTACCGGCTCTGTTGA TGACTGTTGGAGGGTTATTTCTCCCTGAGACACCAAATAGCTTAGTAGAACGAGGATCAAAGGAAAAAGCAAGGAAGCTT CTTGAAAAAATCAGAGGAACAACTGATGTTGACGCAGAGTTCCAAGATATGGTTGATGCAAGTGAGTTGGCTAACTCCAT CAAGCACCCCTTTCGGAACATCCTTGAAAAAAGATACAGGCCAGAGTTGGTCGTGGCAATCTTCATGCCCGCATTCCAGA TACTGACCGGCATAAATTCAATTCTCTTCTATGCTCCAGTGCTGTTTCAAAGCCTGGGATTTGAGGGAGACGCATCTCTC TACTCTTCAGCCTTGACTGGTGGAGTTCTTGCTTTTTCGACCTTCATTTCCATTGCAACAGTAGATAGATTGGGCAGGAG ACCCCTACTCATCAGCGGTGGAATACAAATGATCATATGCCAGGTTATAGTAGCCATAATTTTGGGAATCAAGTTTGGAG AAAATCAAGAATTGTCCAAAAGCTATTCAATATTGGTTGTAGTCGTTATTTGCCTATTTGTTCTGGCTTTCGGATGGTCA TGGGGCCCACTTGGCTGGACTGTTCCTAGTGAGGTGTTTCCATTGGAAATCCGATCAGCAGGGCAGAGCATCACAGTTGC TGTAAACCTTCTGTTCACTTTCATAATTGCCCAGGCCTTTCTTTCGCTTCTCTGCTCCTTCAAGTTTGGGATTTTCCTGT TTTTTGCGGGATGGATTACCATCATGACTATATTTGTTTCTGTGTTCCTGCCTGAAACCAAAGGAATCCCCATTGAAGAA ATGACATACATGTGGAGGAGACACTGGTTCTGGAAAAGGGTACTGCCCCATACAACTGAAGATACCAAGTGA
Protein sequence (LotjaGi4g1v0283300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPTHLRGGLNMMFQVATTFGIFTANMINYGTQKIKPWGWRLSLGLAAVPALLMTVGGLFLPETPNSLVERGSKEKARKL LEKIRGTTDVDAEFQDMVDASELANSIKHPFRNILEKRYRPELVVAIFMPAFQILTGINSILFYAPVLFQSLGFEGDASL YSSALTGGVLAFSTFISIATVDRLGRRPLLISGGIQMIICQVIVAIILGIKFGENQELSKSYSILVVVVICLFVLAFGWS WGPLGWTVPSEVFPLEIRSAGQSITVAVNLLFTFIIAQAFLSLLCSFKFGIFLFFAGWITIMTIFVSVFLPETKGIPIEE MTYMWRRHWFWKRVLPHTTEDTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 321 | 321 | 7.6E-87 | ||
| PANTHER | 1 | 337 | 337 | 2.5E-189 | – | |
| Pfam | 1 | 325 | 325 | 1.2E-93 | ||
| PANTHER | 1 | 337 | 337 | 2.5E-189 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| ProSiteProfiles | 1 | 314 | 314 | 28.052 | ||
| CDD | 1 | 312 | 312 | 4.48027E-136 | – | |
| Gene3D | 1 | 328 | 328 | 4.3E-89 | – | |
| SUPERFAMILY | 2 | 321 | 320 | 3.53E-38 | ||
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| Phobius | 31 | 41 | 11 | - | – | |
| TMHMM | 39 | 61 | 23 | - | – | |
| Phobius | 42 | 61 | 20 | - | – | |
| Phobius | 62 | 122 | 61 | - | – | |
| TMHMM | 123 | 145 | 23 | - | – | |
| Phobius | 123 | 146 | 24 | - | – | |
| PRINTS | 133 | 143 | 11 | 2.4E-14 | ||
| Phobius | 147 | 157 | 11 | - | – | |
| Phobius | 158 | 178 | 21 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| ProSitePatterns | 177 | 194 | 18 | - | ||
| Phobius | 179 | 189 | 11 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 190 | 210 | 21 | - | – | |
| Phobius | 211 | 221 | 11 | - | – | |
| Phobius | 222 | 242 | 21 | - | – | |
| TMHMM | 225 | 247 | 23 | - | – | |
| PRINTS | 227 | 248 | 22 | 2.4E-14 | ||
| Phobius | 243 | 261 | 19 | - | – | |
| PRINTS | 250 | 262 | 13 | 2.4E-14 | ||
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 262 | 284 | 23 | - | – | |
| Phobius | 285 | 290 | 6 | - | – | |
| TMHMM | 289 | 311 | 23 | - | – | |
| Phobius | 291 | 310 | 20 | - | – | |
| Phobius | 311 | 343 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0283300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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