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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0283300 |
| Transcript ID | LotjaGi4g1v0283300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT4G02050.1 sugar transporter protein 7; Swiss-Prot: sp|O04249|STP7_ARATH Sugar transport protein 7; TrEMBL-Plants: tr|A0A1J7I8D9|A0A1J7I8D9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0283300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65525926..65529795) extracted from Lotus japonicus Gifu genome v1.2.
CTGTCTTTATTGGAGCAAAGGTTGGTAACCTCAACAATATAAATTTGAAACTTTAAGAACAATGTTGATCCATAAAGATC AGAATATTTTCTCACAACCTCTCACCTTAGAAATTAAGTGTGATCTGACTCTGAGAAAAAGAGAATTCAGGAAATGGCAG GTGGGTCTTTTACAACAGGTGGTGGTGTGGCTGAGGCGAGGGCAGAGCAATATAAAGGAAAGGTCACTGTTCATGTCATC ATCGCATGCATTGTTGCTGCCACTGGTGGATCCCTCTTTGGCTATGATGTTGGGATCTCAGGTGCTCTTATAATCATTAA TCAATACTCTGAATCAGAAATTTTCATGACTTCAATAGTTTTCACTTTCACATTCTTCTGCAATCAATTCTCTGGATCAA AATTTAGATACTCTTTTTTTTCATTACACAAGAATGATTAAATTAAGATATAAGAACTTTCTGTGATTGAAAGCTGAAAC AAAAAAGTTTATCAGTGAAATGCATGATATCATGTCTTAGAAATTCAAGATTCCATGACTTTATTTCATTCTGTTCTGTC TGCACTCTGCACTAACTCTTATTAATTTTGAAATCTGAAATGCAATCCCCCCCTTCCCTGATTTTAATATGCAACTCTTA ATTATCATCTCAGTATTACAATTAAAACCAGGTCCAGGCAGTTTTTTTCATAAAATCTCTAATGCCTAGCAGTGATGGTA AAATAATAACCCCACATTGAATGGCATCACATGAGCTTTTGGTTCTGTTCTTCTATATCCAATTGTGTCATCATATTCTT GTAATCACCCAACTTGTGCTCTACCTGAGATGGAAAATGTTTGAAATCAAATTCAGGTAAAAGATATCAACAGCTATCTA TAAATTACTGATGCTAGAGGAGACGTGAGAGAGACTCATTTCCTTTCTTATCCATTGTTCAACAATTATGGTCCACTTAA ACTTTTTTAAGATTTTATTTCTTTCTCAAATTTCGCCCATGAATGAATTTCAAAATATTAGTGGAGGATATTCTAGAAAA GCAAAAAAGGGAAGAAAAAAAAAACAGCTACTATAAAGCTCCCGCTATGTGTGAGGTCCATAGAGGGGCTAGATCCACTT TGTGGATCTAATGTAGACAGTCTTACCTTGTATTTTTGCAAGAGACTGATTTCACGACTCAAACTTGAACCGCAAGCAGC AACCTTACCGTTGTGTTGAGGCTCTCCCTCATTCTAGAAAAGCAAAATAAAAATAAAAATAGTAAATAGTATAATCTTTA TAGTAATTTATCAGAAAACTTCTTTGACATGTGTAGTGGTTTAACAGGTGGAGTTACTTCCATGGATGACTTTCTTCAGA AATTCTTCCCCTCTGTATACAAGAAGAAAATGCACGCACAAGAAAACCACTACTGCAAGTTTGACGATCAGGTCTTAGCG GCATTTACCTCTTGTTTATACATTGCTGGTTTGGTTGCATCCCTGGTGGCATCTCCAATTACAAGGAAGTATGGGCGCAG GACAAGTATCATAGGTGGTGGTATCAGCTTTCTCATTGGAGCAGCTCTAAATGCAGCAGCAGCTAATCTGGGAATGCTTA TCGTGGGTCGGATTATGCTTGGTATTGGCATTGGATTTGGAAATCAGGTAATAGCATATTTCTATAACTTTAGAACATAC AAGCTTTGTGTATATTTAAAAGGAGCAACCGCGATTCCTGTTTAAATTAAAACCAACACTAGAGTCTAAATAGCAGAAGG GTAGCCTTGGCACAACAGTAAGAAGTTGTTTCCATGTGACTGAGGTCACGGGTTAACGTCATGGAAGCTGCCTCTTTGTG AAAAACAATGTAAGGCTGCATACAATAGCAGTGGTCGGACCCTCCTCCGGATCTCGCGCATAACAGGACCTTTAATGCAG TGGGATGCCCTGTATTAGAGTCTAGATAGCAAAAGTGACTTTGAGAAGTGAGTGCCAACAGCCCAACACTATGTGATTGT TAACATAAGTCCACAAAATTTTACAGGAAAAAAAGTAGTAATGTGATGGAAACAGTCAATGGTGCAGTAAAATATGTTGA GTTAGAAGATAATCCAGTTATACCTTGAGAAATTACTATAGCTACTCCTCTTGGTGGTTTTTTTGAAGGCTGTTCCACTT TATTTGTCAGAGATGGCGCCAACCCACCTTCGAGGAGGCCTGAACATGATGTTTCAAGTAGCAACAACTTTTGGGATTTT CACAGCAAACATGATCAATTATGGCACACAGAAGATTAAACCATGGGGGTGGAGGCTGTCTCTTGGCCTAGCTGCAGTAC CGGCTCTGTTGATGACTGTTGGAGGGTTATTTCTCCCTGAGACACCAAATAGCTTAGTAGAACGAGGATCAAAGGAAAAA GCAAGGAAGCTTCTTGAAAAAATCAGAGGAACAACTGATGTTGACGCAGAGTTCCAAGATATGGTTGATGCAAGTGAGTT GGCTAACTCCATCAAGCACCCCTTTCGGAACATCCTTGAAAAAAGATACAGGCCAGAGTTGGTCGTGGCAATCTTCATGC CCGCATTCCAGATACTGACCGGCATAAATTCAATTCTCTTCTATGCTCCAGTGCTGTTTCAAAGCCTGGGATTTGAGGGA GACGCATCTCTCTACTCTTCAGCCTTGACTGGTGGAGTTCTTGCTTTTTCGACCTTCATTTCCATTGCAACAGTAGATAG ATTGGGCAGGAGACCCCTACTCATCAGCGGTGGAATACAAATGATCATATGCCAGGTAAAGAAACAAAGAAACTACAGTT TAATGCAAATTTCAATTATGCTTACAACTTACAAAATCCATGAATTTGGGAAATACCACTATAGAACAAATGCTCTCAAT CAGCATGTATAACTGCATAACTCTAGAAAGATAAAGGGGCTCACTTTCCTAATATAACAGCTTTGCTACCTGAAAATGAT GAGATTAAGGGAGAAAATGGTAGTATACAGAAGCAGTTTGCTAAAGCAGAGGAAAAGTTTAGCTTATATTTGCAAATCCA ATTGACTATAATTTTGTTTTTCACATGAGCAGGTTATAGTAGCCATAATTTTGGGAATCAAGTTTGGAGAAAATCAAGAA TTGTCCAAAAGCTATTCAATATTGGTTGTAGTCGTTATTTGCCTATTTGTTCTGGCTTTCGGATGGTCATGGGGCCCACT TGGCTGGACTGTTCCTAGTGAGGTGTTTCCATTGGAAATCCGATCAGCAGGGCAGAGCATCACAGTTGCTGTAAACCTTC TGTTCACTTTCATAATTGCCCAGGCCTTTCTTTCGCTTCTCTGCTCCTTCAAGTTTGGGATTTTCCTGTTTTTTGCGGGA TGGATTACCATCATGACTATATTTGTTTCTGTGTTCCTGCCTGAAACCAAAGGAATCCCCATTGAAGAAATGACATACAT GTGGAGGAGACACTGGTTCTGGAAAAGGGTACTGCCCCATACAACTGAAGATACCAAGTGAAAAGTTCCAGGGAGTCAGG GTGATGCAGTTCAACCATCACAGACCCCAACAAGTCAACAACAGCTCATGATACAGTATAGAATTGAAATTTCAGCTAGT TCTATAAAGTGTAACCTTCGTCTGGTGTAGTTAAGTTAAGTAACCTAAACAAATATAAATCTAGTTAGTAAAAAAGGACA ATATAAAGAAGTCTTCTGTAGAAGAAAAATGAGAATGGCAAATTAGTAGTTAATATCGTGCATAAACAAGAATCTTAAAG TTATCCTTGTTTGTTGCTCATCTAGTAATCTCAAGCATAGCAAGATACTGGACCAAGCCATAAAATGAATAAGGCAGGCA GACACCCTGCATAAGTATTTTTGTGAAGAG
CDS sequence (LotjaGi4g1v0283300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGTGGGTCTTTTACAACAGGTGGTGGTGTGGCTGAGGCGAGGGCAGAGCAATATAAAGGAAAGGTCACTGTTCA TGTCATCATCGCATGCATTGTTGCTGCCACTGGTGGATCCCTCTTTGGCTATGATGTTGGGATCTCAGGTGGAGTTACTT CCATGGATGACTTTCTTCAGAAATTCTTCCCCTCTGTATACAAGAAGAAAATGCACGCACAAGAAAACCACTACTGCAAG TTTGACGATCAGGTCTTAGCGGCATTTACCTCTTGTTTATACATTGCTGGTTTGGTTGCATCCCTGGTGGCATCTCCAAT TACAAGGAAGTATGGGCGCAGGACAAGTATCATAGGTGGTGGTATCAGCTTTCTCATTGGAGCAGCTCTAAATGCAGCAG CAGCTAATCTGGGAATGCTTATCGTGGGTCGGATTATGCTTGGTATTGGCATTGGATTTGGAAATCAGGCTGTTCCACTT TATTTGTCAGAGATGGCGCCAACCCACCTTCGAGGAGGCCTGAACATGATGTTTCAAGTAGCAACAACTTTTGGGATTTT CACAGCAAACATGATCAATTATGGCACACAGAAGATTAAACCATGGGGGTGGAGGCTGTCTCTTGGCCTAGCTGCAGTAC CGGCTCTGTTGATGACTGTTGGAGGGTTATTTCTCCCTGAGACACCAAATAGCTTAGTAGAACGAGGATCAAAGGAAAAA GCAAGGAAGCTTCTTGAAAAAATCAGAGGAACAACTGATGTTGACGCAGAGTTCCAAGATATGGTTGATGCAAGTGAGTT GGCTAACTCCATCAAGCACCCCTTTCGGAACATCCTTGAAAAAAGATACAGGCCAGAGTTGGTCGTGGCAATCTTCATGC CCGCATTCCAGATACTGACCGGCATAAATTCAATTCTCTTCTATGCTCCAGTGCTGTTTCAAAGCCTGGGATTTGAGGGA GACGCATCTCTCTACTCTTCAGCCTTGACTGGTGGAGTTCTTGCTTTTTCGACCTTCATTTCCATTGCAACAGTAGATAG ATTGGGCAGGAGACCCCTACTCATCAGCGGTGGAATACAAATGATCATATGCCAGGTTATAGTAGCCATAATTTTGGGAA TCAAGTTTGGAGAAAATCAAGAATTGTCCAAAAGCTATTCAATATTGGTTGTAGTCGTTATTTGCCTATTTGTTCTGGCT TTCGGATGGTCATGGGGCCCACTTGGCTGGACTGTTCCTAGTGAGGTGTTTCCATTGGAAATCCGATCAGCAGGGCAGAG CATCACAGTTGCTGTAAACCTTCTGTTCACTTTCATAATTGCCCAGGCCTTTCTTTCGCTTCTCTGCTCCTTCAAGTTTG GGATTTTCCTGTTTTTTGCGGGATGGATTACCATCATGACTATATTTGTTTCTGTGTTCCTGCCTGAAACCAAAGGAATC CCCATTGAAGAAATGACATACATGTGGAGGAGACACTGGTTCTGGAAAAGGGTACTGCCCCATACAACTGAAGATACCAA GTGA
Protein sequence (LotjaGi4g1v0283300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGSFTTGGGVAEARAEQYKGKVTVHVIIACIVAATGGSLFGYDVGISGGVTSMDDFLQKFFPSVYKKKMHAQENHYCK FDDQVLAAFTSCLYIAGLVASLVASPITRKYGRRTSIIGGGISFLIGAALNAAAANLGMLIVGRIMLGIGIGFGNQAVPL YLSEMAPTHLRGGLNMMFQVATTFGIFTANMINYGTQKIKPWGWRLSLGLAAVPALLMTVGGLFLPETPNSLVERGSKEK ARKLLEKIRGTTDVDAEFQDMVDASELANSIKHPFRNILEKRYRPELVVAIFMPAFQILTGINSILFYAPVLFQSLGFEG DASLYSSALTGGVLAFSTFISIATVDRLGRRPLLISGGIQMIICQVIVAIILGIKFGENQELSKSYSILVVVVICLFVLA FGWSWGPLGWTVPSEVFPLEIRSAGQSITVAVNLLFTFIIAQAFLSLLCSFKFGIFLFFAGWITIMTIFVSVFLPETKGI PIEEMTYMWRRHWFWKRVLPHTTEDTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| PANTHER | 11 | 501 | 491 | 2.8E-252 | – | |
| PANTHER | 11 | 501 | 491 | 2.8E-252 | – | |
| Gene3D | 20 | 492 | 473 | 4.9E-126 | – | |
| TIGRFAM | 20 | 485 | 466 | 8.1E-119 | ||
| Phobius | 24 | 44 | 21 | - | – | |
| TMHMM | 26 | 48 | 23 | - | – | |
| ProSiteProfiles | 31 | 478 | 448 | 46.172 | ||
| Pfam | 32 | 489 | 458 | 1.8E-128 | ||
| CDD | 34 | 476 | 443 | 0.0 | – | |
| PRINTS | 39 | 49 | 11 | 2.0E-29 | ||
| Phobius | 45 | 84 | 40 | - | – | |
| SUPERFAMILY | 78 | 485 | 408 | 2.49E-58 | ||
| Phobius | 85 | 104 | 20 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| Phobius | 116 | 135 | 20 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 136 | 140 | 5 | - | – | |
| PRINTS | 141 | 160 | 20 | 2.0E-29 | ||
| Phobius | 141 | 162 | 22 | - | – | |
| ProSitePatterns | 146 | 171 | 26 | - | ||
| Phobius | 163 | 173 | 11 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| Phobius | 174 | 192 | 19 | - | – | |
| Phobius | 193 | 203 | 11 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| Phobius | 204 | 225 | 22 | - | – | |
| Phobius | 226 | 286 | 61 | - | – | |
| TMHMM | 287 | 309 | 23 | - | – | |
| Phobius | 287 | 311 | 25 | - | – | |
| PRINTS | 297 | 307 | 11 | 2.0E-29 | ||
| Phobius | 312 | 322 | 11 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 323 | 345 | 23 | - | – | |
| ProSitePatterns | 341 | 358 | 18 | - | ||
| Phobius | 346 | 351 | 6 | - | – | |
| Phobius | 352 | 374 | 23 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 375 | 385 | 11 | - | – | |
| Phobius | 386 | 406 | 21 | - | – | |
| TMHMM | 389 | 411 | 23 | - | – | |
| PRINTS | 391 | 412 | 22 | 2.0E-29 | ||
| Phobius | 407 | 426 | 20 | - | – | |
| PRINTS | 414 | 426 | 13 | 2.0E-29 | ||
| TMHMM | 426 | 448 | 23 | - | – | |
| Phobius | 427 | 447 | 21 | - | – | |
| Phobius | 448 | 452 | 5 | - | – | |
| Phobius | 453 | 474 | 22 | - | – | |
| TMHMM | 453 | 475 | 23 | - | – | |
| Phobius | 475 | 507 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0283300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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