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LotjaGi4g1v0290300.2

Overview

Field Value
Gene ID LotjaGi4g1v0290300
Transcript ID LotjaGi4g1v0290300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Autophagy-related protein 11; TAIR: AT4G30790.1 autophagy-like protein; Swiss-Prot: sp|Q9SUG7|ATG11_ARATH Autophagy-related protein 11; TrEMBL-Plants: tr|I1JGS5|I1JGS5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0290300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:66262426..66268363) extracted from Lotus japonicus Gifu genome v1.2.

AGTTCTTCTAGCTTCAATAGAAGTATGACAGTCCATGGGAGCCAGCTGCTGGTTCATATTGCTGAGAATGGACACTCCTT TGAGTTGGACTGTGATGAGAACATGCTTGTTGAGGCTGTGATGAGGTCTATTGAATCGGTTACTGGGATTAGCTTCAGTG ATCAACTTGTTCTTTGTCTGGATATGAAGCTTGAGCCGCAGCGGTCGCTCGCGGCGTACAAGCTTCCATCTGATGATAGG GAAGTGTTCATATTCAACAAAGCGAGGCTTCAGAATAACTCGCCGCCTCCACCTCCGGAGCAAGTCGATATCCCCAATTT GGAGCCACCATCATTGTCGTCCCCTCGTGATCGGCACCCTCTTGATGATGCTTTGGATCCTGCTTTGAAGGCTTTGCCTT CTTATGAGCGGCAATTTAGGCACCATTATCATCAGGGGCATGCAATTTATACTGGTACCATGGTGAAGTATGAGCATTGT GAGAGGCTTTTGAGAGAACAGATGGTCCAAGAAAGAGCAGTGGAGGTTGCAAGGGGTAATTTGGATCAGTACTATAGAAT GATTAACCAAAACTATGGAGATTTCATGAAACGTTATATGCATCAATACAGGATTCATTCTGATCTTTTGGTAAATTTTG GAAAGGGTATTGAGAAACTAAGATCTGTCAAACTTCACCCTGCTTTGCAAACTGCTAATCGCAAATGCTTACTGGATTTG GTGAAGGAAGAAAACTTGCGGAAGTCAGTGGATAATTGCACTAGCTCCCACAAGCAGTTTGAGAATAAAGTGTCACAATT CAAGCAGACTTTTGGGGAAGTGAAGCGCCGGGTTGAGGACTTGTTGTCCAGCAGGGCTTTCTTGCCCATCAAAAACTTAG AACAAGCAATTAAAGAACATCAGAGATTTATAACTGAACAAAAGAGTATCATGCAATCTCTGAGGTTAGTTTCTTTTATT TGGCAACCTTTTTTTCAATGCTGTGCACTTTATTGCTGATGAAGCATTTAATGCTTATGTGTTATCCTGATTTTGCAATG GCATCCAGTTTTGTAACTTAATTACTTATTTCATGAGTTTAATATTCAAATTCTGGTATCAAGCTCTAAAATGTCGTGTT AAATGGCCTGATCTCAAATAATTATGCACCATTTCTGCATAGTTATTGTCCCACTCCATGCTGGTTATGAAGTTTGTATA GGGAGACTTGTCTTTTCTAGTTTTTAGGACCATGTGCTTAACACAGAGGAGAGGCAATATGGAATAATACTTGATTCCAG ATGTCACTTGCTGTACTTATCATTCCGCTTTTTTATGCTTCTTGTCTTCTGAAATAATTTCGTTATACCAAATGTTCTTG GTGCACCTTCTAAATTACCTTGTGTGGGTTCTGCAGCAAGGATGTTAACACTGTAAAGAAACTGGTGGATGATTGTCTGT CCTCTCAGTTGTCCTCCTCGCTCCGTCCTCATGATGCGGTTTCAGCACTGGGTCCTATGTATGATGTTCATGACAAAAGC CACTTGCCTAAAATGCAGGATTGTGATCATGCTATTTCTAAGCTACTTGACTTTTGCAAGGAAAAGAAGAATGAAATGAA CATCTTTGTCCACAATTACATGCAAAACATCACTTATGTTTCTTATCTCATCAAAGATCAGAAGCTACAATTCCCTGTGT TCAAAGAGGCAATGGTTCGTCAGGATGGTTTGTTCGTGGATTTAAAGTTGTTCCATGGTATTGGTCCTGCATATAGAGCT TGCCTTGCAGAAGTAGTGAGACGGAAGGCTTCTATGAAGTTGTACATGGGCATGGCTGGGCAATTGGCTGAAAGGCTTGC TACAAAACGGGAGGCTGAGGTAAGGAGACGGGAGGAGTTTTTGAGAGCTCATAGTTCATGCATTCCTAGAGAAGTATTAG CATCTATGGGGTTGTTTGACACTCCTAACCAATGTGATGTCAATATAGCTCCATTTGATCTTGGTTTGCTTAATATTGAC ATAATAGATGTGGATCGTTATGCTCCTGAGCATCTAGTAGGAGTAACTTCCAAGCTGGAGAAGCATGGAAGCTTCAAAAG CTCATCTACTTTGACTAGTGATAGCTCTCACTTGACCGAGTCTGTAGATATTGCTGCTGACTCAATTGAGAGATATGATT CTGAAGACCTTCTTGATGGCAGTGAGTTGATAGAAATTGCAGGAACCTCTAAGTTGGAAGTTGAGAATGCAAAACTGAAA GCTGAGCTTGCTTCTAGAATAGCTTTAATATGTTCCCTCTGCCCTGAGGTAGAGTACGAGTCACTGGATGATGAAAGGGT TGATAATATACTGAAGAATGCCACTGAGAAGACAACAGAAGCCTTGCGTTTGAAAGATGAATATGTCAAACATGTTCAAT CCATGCTCAAGATGAAACAGTTACAATGTGTGTCATATGAAAAACGTATTCAAGAATTGGAGCAGAAATTGTCTGATCAG TATGTGCAGGGCTTGAAGACATCTAGTGTAAATGATGCAGGTGACTTTCCCCTTGTGGCTGGGAAGACAGATAATTACAA GTCAGAATGCACTAGTGGTGAAGCCCACATGCCTTACATATCTACTACTGAACCCATGGATGAAGTTTCATGCATCTCAA GCTCCTTGGATGCAAAACTTGGCCTGTTCACAGAACATACTGGTAAAACTCTAGATGGGCTGGACGAGAACATGTTGGAT TCCTCTGGAGTACAGAACCCTCAGTTAGATTCATCTATGATGGAACCTCATCGTGAAGAAGCACAAAGTGGTGATAAAGA TAAAAAAGATAAGATAGTGGGACAATTGGGCTTGTCACTAACACACAGTTCTACTGCTGAGAGCATGCCTGTATCACATT CAGCAGTTTGTCCAGAATTGGATTCAAAAGTAAATGATGACAAGTTGTTGGAATTACGAAGTGAGCTTGCAGATAAGGCA AATCAATTAAATGAAAATGAAACCAAGCTCAAAGCTGTTATGGAGGAGGTTACTGTGCTCAGGAGGGAGTTGGAAGCAAG TCGAAAACTACTTGATGAATCTCAGGTAACACATTACATAGAATTGAATTAGACAGAATATTTTAGATTTTCAAGTTAAT ATTTTGAAAAGTAGTTCCCTTGATCTCCTAAACTCTTCATTATTCTCTCTGTTCACTGCTTTCATGTCATTTTCCAATCT CTGCCCCTTCTCTTTCTCTATCTTGCACAGATATGCATTCTATTAGCAATTCATCTGAAATAATTGTTCAAATTATTCTA TATAAGATTTTTCATTGATGGGGCTGCGAACCAGGATAAGTTATTGGACCCAATTGATAAGCCCAAGGTGTGGAGGGTAC ATGTTAGAAAGAGAAAGACCAAAGGGGTAAAAGAGGAATTAAATGCATCATTTGGTTAGGAGGGGAAGGGTATGAGTGTG CGGATGATCGTAGTGGGGGAATCATTGAGGTAGTTTGTATTTGGCTAGAGAGCGGAATTCCAATAGCCATTGGAACCTCT GTAGGAGCCATAGGCTCTGGTTGGTTTCTATTTGCTGTTTTGCTTGTCATAGGGAGTAATACTTACATTTTCATTATCTG GATTCCATCGGTCGTCTTCCCCTAGCCCTCCACCATCAACACCCATATTCTTCTTGTATTTTAGTTACTCTATGTGGATA CATTTAAATGTTAAATAAATGTTTCCTTAGCATCTTGTATTGATGCTGCATAAAACCATGCTGAGTAGAGTTTTAGTTGG CTGTTAGCAAGTTTACTGTAGACAATAAGTTCATATAAATGCAGTCTTCCGTTACTGTAGATTCATGTTTAAAACCTGTT AGGTGCTTAGGTTGAACTGGCCTCTTGGAAAAATCTAACCAAATAAAGATCATTGATTCTTGATTCTTCTTTGGTCATCT TAGGAATGATGCATTTAAAACTTCTTTCTTAATTATTTTTCTTTTTACCACAAGGGCAATGCTTCATTGTTGTTGGTTCA TTATTGTGCTTTCCTTTTATATTCTAATGTACTTTTCCTCTTTCATTATAGTTGAATTGTGCTCATCTGGAGAATTGTTT GCATGAGGCAAGAGAGGAAGCTCAGACACAAAAAAGCTCTGCTGACAGGAGGGCCTCAGAGTATAGTTCACTGCGTGCAT CTGTTATAAAAACGCGGAGCTTTTTTGAAAGACTCAAAACCTGTGTTTATTCTCCTGGTGGTGTGGCTGCTTTTGCAGAT TCCCTGCGCAATTTAGCGCAATCTTTGGCCAAGTAATTTCCTTACATTAATTGCACCATGAGAGCCTGTGTTAAATTTTG TGTGTAAAATTTTATATCCTCCCCTTCAATGTACTGCCCATTCACACTTAAGGAAAAAATCATCATTTTGCAATTACATC ATTAGGTTGAGAGTACATAAAATTTATTACGCAGTTCTTGCCCCTTTTTTGTCTTTTTTCTTTGAGGGGAGCAGATTCTA GGCTATTTTGTCTGACTGATGTGTTTCCCAGTGATATTTTTTATTTGTTCACGACAAGGAGGATGATAGAAACTCTTTTT TCTCTTTTCAGTTCTGCTAATGACAGAGATGATGATGACATTGCTGAGTTCCGAAAATGCATTCGTGTATTGGCCGATAA AGTTGGTTTCTTATCCAGGCACCGTGAAGAACTGCATGAGAAGTATACAAGAATGGAAGCTGCCAACGAACAACTTCGGA AAGAATTGGAGGAGAAAATAGATCAGGTCAAAACTTATTACAATAAGCATCAACTTGAGAAGCAGGTGAGTTAAATGTCC ATATGTTCATGATACAGTTCTAAGCTTCTTGTTCCTTAACAGCATGTGGCAATAAAATGTCTCCTTTAGAGTTGGTCTAC TTTTAACTAAGGCTGGCTCTCTTTCTTTGAAGCCAGCAAAACCCAAATGCCTGATGATTAATTAATAGAATGAATGAGTT TTGTTGTAAGTTTAGTCGTGAATGGGGTGTTAATCCTTAATCACACAGTCGTAAGATTAGTAATCACATAGTAACAAATG CATATAAATTCATATATATGCATAAAAAATCGCATAAATAACAAATATAAATCACTTTTTGATGTGATTAATCCTACGAT TAAGCCAGAAAACTGTCACAGATGCCATTTTAATCGCCCTGGGTACCATTAATCGCATAATCGTGCAATTAAGCGATTTT AATCGCAATTTTAACTACTGTGGTTCTACTCATTATAAATTCTGAACTTGTTCAGTATATAGTGAGATTGTCAGTTCCGG TAACTGTTTAGACTATGTAATTGACAAGTGGTTTGGTATTGCCAGCTGTAAATATTAGTCAATTACTCTGTTGTAATCTG TTAGAACTTAGAAGTGTCTTATAGAATTAGTGCCAGCTGTTATGATTAGTTAGCTTAGAGCACAAGCTTCTACAGGGTTA TATAAACTCTTCTCTGTACATTTGTAATGCATTGAGCATAATACACTTTTCATTCAGTTCTAAATTTCTTCTTCTCCAAT TCTATCTGGACTGACTAGTTATATTCTGCTTGTGATTTTGTTGCAGGCAAATAAAGAGAAGATTTCTTTTGGTTGTCTGG AAGTTCATGAGATTGGCGCCTTTGTGCTCACTCCAGGTGGGCACTATGAGGCAATTAGCAGGAACTGCTCTAACTACTAC TTATCTGCTGAATCTGTGGCCCTGTTTACAGAGCATCTTCCAAGCAGACCTAACTACATTGTTGGACAAATTGTGCATAT TGAACACCAAATTGTGAAGGCAGTGCCTGAGCATGGTAAATTGACCCCTGACAAGTTGGCCTTGAATTCAGGATCAACTT CTTCAAACCCATATGGTCTCCCTGTTGGCTGTGAATATTTTCTAGTGACAGTAGCCATGTTACCTGATACCACCATTCAT TCATCTTCTCCTTCCTGA 

CDS sequence (LotjaGi4g1v0290300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACAGTCCATGGGAGCCAGCTGCTGGTTCATATTGCTGAGAATGGACACTCCTTTGAGTTGGACTGTGATGAGAACAT GCTTGTTGAGGCTGTGATGAGGTCTATTGAATCGGTTACTGGGATTAGCTTCAGTGATCAACTTGTTCTTTGTCTGGATA TGAAGCTTGAGCCGCAGCGGTCGCTCGCGGCGTACAAGCTTCCATCTGATGATAGGGAAGTGTTCATATTCAACAAAGCG AGGCTTCAGAATAACTCGCCGCCTCCACCTCCGGAGCAAGTCGATATCCCCAATTTGGAGCCACCATCATTGTCGTCCCC TCGTGATCGGCACCCTCTTGATGATGCTTTGGATCCTGCTTTGAAGGCTTTGCCTTCTTATGAGCGGCAATTTAGGCACC ATTATCATCAGGGGCATGCAATTTATACTGGTACCATGGTGAAGTATGAGCATTGTGAGAGGCTTTTGAGAGAACAGATG GTCCAAGAAAGAGCAGTGGAGGTTGCAAGGGGTAATTTGGATCAGTACTATAGAATGATTAACCAAAACTATGGAGATTT CATGAAACGTTATATGCATCAATACAGGATTCATTCTGATCTTTTGGTAAATTTTGGAAAGGGTATTGAGAAACTAAGAT CTGTCAAACTTCACCCTGCTTTGCAAACTGCTAATCGCAAATGCTTACTGGATTTGGTGAAGGAAGAAAACTTGCGGAAG TCAGTGGATAATTGCACTAGCTCCCACAAGCAGTTTGAGAATAAAGTGTCACAATTCAAGCAGACTTTTGGGGAAGTGAA GCGCCGGGTTGAGGACTTGTTGTCCAGCAGGGCTTTCTTGCCCATCAAAAACTTAGAACAAGCAATTAAAGAACATCAGA GATTTATAACTGAACAAAAGAGTATCATGCAATCTCTGAGCAAGGATGTTAACACTGTAAAGAAACTGGTGGATGATTGT CTGTCCTCTCAGTTGTCCTCCTCGCTCCGTCCTCATGATGCGGTTTCAGCACTGGGTCCTATGTATGATGTTCATGACAA AAGCCACTTGCCTAAAATGCAGGATTGTGATCATGCTATTTCTAAGCTACTTGACTTTTGCAAGGAAAAGAAGAATGAAA TGAACATCTTTGTCCACAATTACATGCAAAACATCACTTATGTTTCTTATCTCATCAAAGATCAGAAGCTACAATTCCCT GTGTTCAAAGAGGCAATGGTTCGTCAGGATGGTTTGTTCGTGGATTTAAAGTTGTTCCATGGTATTGGTCCTGCATATAG AGCTTGCCTTGCAGAAGTAGTGAGACGGAAGGCTTCTATGAAGTTGTACATGGGCATGGCTGGGCAATTGGCTGAAAGGC TTGCTACAAAACGGGAGGCTGAGGTAAGGAGACGGGAGGAGTTTTTGAGAGCTCATAGTTCATGCATTCCTAGAGAAGTA TTAGCATCTATGGGGTTGTTTGACACTCCTAACCAATGTGATGTCAATATAGCTCCATTTGATCTTGGTTTGCTTAATAT TGACATAATAGATGTGGATCGTTATGCTCCTGAGCATCTAGTAGGAGTAACTTCCAAGCTGGAGAAGCATGGAAGCTTCA AAAGCTCATCTACTTTGACTAGTGATAGCTCTCACTTGACCGAGTCTGTAGATATTGCTGCTGACTCAATTGAGAGATAT GATTCTGAAGACCTTCTTGATGGCAGTGAGTTGATAGAAATTGCAGGAACCTCTAAGTTGGAAGTTGAGAATGCAAAACT GAAAGCTGAGCTTGCTTCTAGAATAGCTTTAATATGTTCCCTCTGCCCTGAGGTAGAGTACGAGTCACTGGATGATGAAA GGGTTGATAATATACTGAAGAATGCCACTGAGAAGACAACAGAAGCCTTGCGTTTGAAAGATGAATATGTCAAACATGTT CAATCCATGCTCAAGATGAAACAGTTACAATGTGTGTCATATGAAAAACGTATTCAAGAATTGGAGCAGAAATTGTCTGA TCAGTATGTGCAGGGCTTGAAGACATCTAGTGTAAATGATGCAGGTGACTTTCCCCTTGTGGCTGGGAAGACAGATAATT ACAAGTCAGAATGCACTAGTGGTGAAGCCCACATGCCTTACATATCTACTACTGAACCCATGGATGAAGTTTCATGCATC TCAAGCTCCTTGGATGCAAAACTTGGCCTGTTCACAGAACATACTGGTAAAACTCTAGATGGGCTGGACGAGAACATGTT GGATTCCTCTGGAGTACAGAACCCTCAGTTAGATTCATCTATGATGGAACCTCATCGTGAAGAAGCACAAAGTGGTGATA AAGATAAAAAAGATAAGATAGTGGGACAATTGGGCTTGTCACTAACACACAGTTCTACTGCTGAGAGCATGCCTGTATCA CATTCAGCAGTTTGTCCAGAATTGGATTCAAAAGTAAATGATGACAAGTTGTTGGAATTACGAAGTGAGCTTGCAGATAA GGCAAATCAATTAAATGAAAATGAAACCAAGCTCAAAGCTGTTATGGAGGAGGTTACTGTGCTCAGGAGGGAGTTGGAAG CAAGTCGAAAACTACTTGATGAATCTCAGTTGAATTGTGCTCATCTGGAGAATTGTTTGCATGAGGCAAGAGAGGAAGCT CAGACACAAAAAAGCTCTGCTGACAGGAGGGCCTCAGAGTATAGTTCACTGCGTGCATCTGTTATAAAAACGCGGAGCTT TTTTGAAAGACTCAAAACCTGTGTTTATTCTCCTGGTGGTGTGGCTGCTTTTGCAGATTCCCTGCGCAATTTAGCGCAAT CTTTGGCCAATTCTGCTAATGACAGAGATGATGATGACATTGCTGAGTTCCGAAAATGCATTCGTGTATTGGCCGATAAA GTTGGTTTCTTATCCAGGCACCGTGAAGAACTGCATGAGAAGTATACAAGAATGGAAGCTGCCAACGAACAACTTCGGAA AGAATTGGAGGAGAAAATAGATCAGGCAAATAAAGAGAAGATTTCTTTTGGTTGTCTGGAAGTTCATGAGATTGGCGCCT TTGTGCTCACTCCAGGTGGGCACTATGAGGCAATTAGCAGGAACTGCTCTAACTACTACTTATCTGCTGAATCTGTGGCC CTGTTTACAGAGCATCTTCCAAGCAGACCTAACTACATTGTTGGACAAATTGTGCATATTGAACACCAAATTGTGAAGGC AGTGCCTGAGCATGGTAAATTGACCCCTGACAAGTTGGCCTTGAATTCAGGATCAACTTCTTCAAACCCATATGGTCTCC CTGTTGGCTGTGAATATTTTCTAGTGACAGTAGCCATGTTACCTGATACCACCATTCATTCATCTTCTCCTTCCTGA 

Protein sequence (LotjaGi4g1v0290300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTVHGSQLLVHIAENGHSFELDCDENMLVEAVMRSIESVTGISFSDQLVLCLDMKLEPQRSLAAYKLPSDDREVFIFNKA RLQNNSPPPPPEQVDIPNLEPPSLSSPRDRHPLDDALDPALKALPSYERQFRHHYHQGHAIYTGTMVKYEHCERLLREQM VQERAVEVARGNLDQYYRMINQNYGDFMKRYMHQYRIHSDLLVNFGKGIEKLRSVKLHPALQTANRKCLLDLVKEENLRK SVDNCTSSHKQFENKVSQFKQTFGEVKRRVEDLLSSRAFLPIKNLEQAIKEHQRFITEQKSIMQSLSKDVNTVKKLVDDC LSSQLSSSLRPHDAVSALGPMYDVHDKSHLPKMQDCDHAISKLLDFCKEKKNEMNIFVHNYMQNITYVSYLIKDQKLQFP VFKEAMVRQDGLFVDLKLFHGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATKREAEVRRREEFLRAHSSCIPREV LASMGLFDTPNQCDVNIAPFDLGLLNIDIIDVDRYAPEHLVGVTSKLEKHGSFKSSSTLTSDSSHLTESVDIAADSIERY DSEDLLDGSELIEIAGTSKLEVENAKLKAELASRIALICSLCPEVEYESLDDERVDNILKNATEKTTEALRLKDEYVKHV QSMLKMKQLQCVSYEKRIQELEQKLSDQYVQGLKTSSVNDAGDFPLVAGKTDNYKSECTSGEAHMPYISTTEPMDEVSCI SSSLDAKLGLFTEHTGKTLDGLDENMLDSSGVQNPQLDSSMMEPHREEAQSGDKDKKDKIVGQLGLSLTHSSTAESMPVS HSAVCPELDSKVNDDKLLELRSELADKANQLNENETKLKAVMEEVTVLRRELEASRKLLDESQLNCAHLENCLHEAREEA QTQKSSADRRASEYSSLRASVIKTRSFFERLKTCVYSPGGVAAFADSLRNLAQSLANSANDRDDDDIAEFRKCIRVLADK VGFLSRHREELHEKYTRMEAANEQLRKELEEKIDQANKEKISFGCLEVHEIGAFVLTPGGHYEAISRNCSNYYLSAESVA LFTEHLPSRPNYIVGQIVHIEHQIVKAVPEHGKLTPDKLALNSGSTSSNPYGLPVGCEYFLVTVAMLPDTTIHSSSPS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 7 1115 1109 0.0
SUPERFAMILY 8 69 62 5.81E-6
CDD 17 77 61 5.72414E-4
MobiDBLite 81 114 34 -
Coils 644 671 28 -
MobiDBLite 741 778 38 -
MobiDBLite 761 778 18 -
Coils 817 879 63 -
Coils 964 1002 39 -
Pfam 968 1105 138 1.6E-17

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Autophagosome assembly The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.
Biological process Autophagy of mitochondrion The autophagic process in which mitochondria are delivered to the vacuole and degraded in response to changing cellular conditions.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0290300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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