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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0295200 |
| Transcript ID | LotjaGi4g1v0295200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase; TAIR: AT2G18700.1 trehalose phosphatase/synthase 11; Swiss-Prot: sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 11; TrEMBL-Plants: tr|V7C9K3|V7C9K3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0295200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66784704..66788401) extracted from Lotus japonicus Gifu genome v1.2.
TCCAAACCCAGTGAGTTAATAACTGAAGGATAATGTAGAGTAGTCGGTTACAGTAAGCACTTAGTACAGATCAAATCTCA ACCGTTGGATGAATCCGTTTAATTACATCCCATATAAAACCCGGTTCGGTTTCCTGTTCTGCTTCGACCTCGTTCTTATC CGCAACACTTCTTCAGTGTCGTGGTTTTGTTGCAGACAAAAACGCCACCCTTCGCTCTTTCTTCTTCTATGGAATGTGTA TCATCATCATCATCATCAAAATCAGAATCCAAGATTTCCATTGCTACAAGATTCATCTTCCTCTGCAACACCCACCTATA ATAATACCATCACACCAACACAGTTTTCTTCACCCTCAACCACCACCTCAGTTTTCATTTTCATTTTGATTTTGTATTTG GATAATGCTCTCGCGATCTTGCGTGGGGTTATTGAATCTGATATCAGCGGATGATTACAATCGAGTTCCAGGGGTAATGG CGCCGGAGATTAACAATTTCGGATCAGACGGCGGCGTTTCGCCGGCGTCACGAGAACGGCGGATAATCGTGGCGAATCAG TTACCGATACGCGCTTCACGCGACGGGGAGAACGAGCACTGGCGGTTTGAATTTGACAGAGATAGTCTGGTTTTACAGGC GAAAGATGGGTTTCCATCGGAGGTTGAGGTTCTCTATGTGGGGTCGTTGAAGGCGGAGGTCGAGCCAAAGGAGCAAGACG AGGTGGCGCAGGTTCTTCTAGAGAAGTTTCACTGTGTTCCCACGTTTTTGCCTTCGGAGGTTCACAATCTCTTCTACCAT GGGTTCTGTAAGCACTATCTATGGCCTCTGTTTCACTACATGCTCCCCATGTCGCCGAGCCAGGGTGCGCGGTTCGACCG CGCGCAGTGGCAGGCGTATGTTCATGCCAACAAGATCTTCGCTGATAAGGTCACGGAGGTGATTAACCCAGATGAGGATT TCGTCTGGGTTCACGATTACCACCTCATGATTCTCCCAACTTTGCTCAGGAAGCGTTTCCACCATGTGAAGCTTGGATTC TTCCTCCACAACACGTTCCCGACGTCGGAAATCTACCGGACTATACCGGTGAGAGAGGAGATTCTCAGGGCGTTTCTCAA CTGTGATTTGATTGGGTTCCACACCTTTGATTACGCAAGGCATTTTTTGTCCTGTTGTAGCAGGATGCTGGGGTTGGATT ATGAGTCCAAAAAGGGTCACATTGGGTTGGATTATTATGGAAGAACAGTGAATATTAAGATTCAACCAGCTGGGATTCAT ATGGGTTTGCTGGAATCGGTTTTGTCGTTGCCGGAAACTGCTTCCAGGGTGAAGGAGTTGAGGGAGCAGTATAAGGGGAA AATCGTGATCTTAGGAGTTGATGATATGGATTTGTTCAAGGGTATTAGCTTGAAGTTCTTGGCACTTGGGCAGCTACTGG ACCAGCGTGAGCATTTGAGGGGTCGTGTGGTGCTGGTTCAGATTCTGAATCCTGCAAGAAGCAGAGGGAAGGACATTCAG GATGTGAAGAGTGAGAGTGAGGCTATTGCAAGTGAGATTAACCAGAGGTATGGCAGAAAGGGGTACCTGCCAATTGTTTG TATCAACGGCCCAGTTTCCACTCAGGAGAAGGTGGCTTACTATGCTGTGTCTGAGTGCTGTGTTGTGAGTGCTGTGAGGG ATGGGATGAATTTGATGCCTTATGAGTACACTGTGTGCAGGCAGGGGAGTGTTGCCTTGGATAAGGCACTTGGGGTTGAA GGAGATGAGAATGGGAAGGTGAAACCCAAGCAGAGTGTTATTATTGTGTCTGAGTTCATTGGGTGTTCCCCTTCTCTCAG TGGAGCCATTCGGGTGAATCCGTGGAACATTGATGATCTTACTGAGGCCATGAACTCGGCCATCACAATGTCGGAGGCAG AGAAGCATTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCTCATGATGTAGCCTATTGGGCGAGGAGTTTTGATCAG GATTTAGGCAGGGCTTGTAGGAAGCATCACCGTAAGAGGTGTTGGGGTTTTGGGCTGGGATTGGGATTTAGAGTTGTTGC TTTGGATCCTACCTTCAGGAAGCTCTTTGTTGATAACATTGTCTCTGACTACAGAGATACACAGAGTAGGTTGATCCTTT TGGACTATGATGGCACTATGATGCCCCAGGCCTCTATTGACAAAACTCCAAGCACTGAGGTCATTTCTGTCTTGAATAGT CTATGCAGTGATCCCAGAAATATTGTGTTTATAGTCAGCGGCAGAGATAAGGATCGCCTCAGCGAGTGGTTTTCTCCGTG TGAGAAGCTGGGTCTCTCTGCTGAGCATGGTTACTTCACCAGGTAACATTGAATTGAACTAATTGAATTTCCATGTTATA GTTAGAGATTCATCAATGTTGGGTCTTGGTGTTTTTGTTAATCCATTGTTTGTTCTTGATTGCTGGCAGGTGGAGTAAGG ACTCTCCTTGGCAGACCCAGGGATCAACAACAGAATTTGATTGGAAAATGGTTGTGGAGCCGGTGATGGCGCTTTATACA GAAGCAACGGATGGTTCTTTCATCGAACAAAAGGAAAGCGCAATTGTTTGGCACCATCAGGAAGCAGATCCTCATTTTGG GTCATGCCAGGCAAAAGAGCTACTTGATCACCTGGAGAATGTGCTGGCTAATGAGCCAGTGGTGGTTAAAAGGGGACAAC ATATAGTTGAAGTTAAACCTCAGGTATCAACCAATACTCTTTGAACTGACAATTTTGGTAGTTCTCAAGGTGAATTTGAT AATGTTCATTAGTTATTTGTTAAAATTGTGTATTTTTCTGTTTTGCTGCAGGGTGTGAGCAAAGGTATGGTAGTTGAAGA GCTTATCTCAACCATGAGGAGTGAGGGGAAATCACCAGATTTTCTTCTGTGCATTGGAGATGATCGCTCAGATGAAGACA TGTTTGAGAGCATTGCTAGTTCAGTTTCTAACCCAGCTCTGCCAACCATATCCAAAGTGTTTGCTTGCACTGTTGGCCAG AAACCAAGCATGGCTAAATACTATTTGGAAGATACTAGCGAGGTTATCAATTTGCTCGAAGGACTCGCGACTGCATCAGC CCCAGCTACGCTGCCCATAGCTTCTCAGGAATTGCAAGGAGGAACATTGTAGAAACTGATACAGAAAACAGTCTTGTACA GAACGATACTTTCATAGGTTGATTCGAAAAAAAAGGGGCCAATACTTAGAAATCTACAGAATAGCTTAATTCATGATGTT CTTCTTCACATAACTTGCAGTAAAAAATTATTTTTCTTTCCTCACTGTGCAATGAAAACGTGCCTAAAACTAGTCTTTTC CGGAGTATGAGGGTTCAGTAAACAATAATCTTTCTTGAGTATGAGGGTTCTATGAATAAATTTACTGTTATGGTGAAAAT TGAAACTAGCAAAGCTTAATATACTCTTCTTCATTATGGTGTGAAAAAATGTGCATTTGGATTTTAATTAAATGAAAGGC ACAAGCATCATATGATGAGGCCACAGCATGCCCCATAAAATGGTTGTCAGTACTTGCTGGTCCATCACAAGCTGGCAAAT TTATGTTTCCTTGCAATCAAGTTAAAAAGAACGTGTCACATATTCTATTAAGGACATGTTTGGTTTCTTGCTCAGAAGCT CTCCAAAATAAATTTGTG
CDS sequence (LotjaGi4g1v0295200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCTCGCGATCTTGCGTGGGGTTATTGAATCTGATATCAGCGGATGATTACAATCGAGTTCCAGGGGTAATGGCGCC GGAGATTAACAATTTCGGATCAGACGGCGGCGTTTCGCCGGCGTCACGAGAACGGCGGATAATCGTGGCGAATCAGTTAC CGATACGCGCTTCACGCGACGGGGAGAACGAGCACTGGCGGTTTGAATTTGACAGAGATAGTCTGGTTTTACAGGCGAAA GATGGGTTTCCATCGGAGGTTGAGGTTCTCTATGTGGGGTCGTTGAAGGCGGAGGTCGAGCCAAAGGAGCAAGACGAGGT GGCGCAGGTTCTTCTAGAGAAGTTTCACTGTGTTCCCACGTTTTTGCCTTCGGAGGTTCACAATCTCTTCTACCATGGGT TCTGTAAGCACTATCTATGGCCTCTGTTTCACTACATGCTCCCCATGTCGCCGAGCCAGGGTGCGCGGTTCGACCGCGCG CAGTGGCAGGCGTATGTTCATGCCAACAAGATCTTCGCTGATAAGGTCACGGAGGTGATTAACCCAGATGAGGATTTCGT CTGGGTTCACGATTACCACCTCATGATTCTCCCAACTTTGCTCAGGAAGCGTTTCCACCATGTGAAGCTTGGATTCTTCC TCCACAACACGTTCCCGACGTCGGAAATCTACCGGACTATACCGGTGAGAGAGGAGATTCTCAGGGCGTTTCTCAACTGT GATTTGATTGGGTTCCACACCTTTGATTACGCAAGGCATTTTTTGTCCTGTTGTAGCAGGATGCTGGGGTTGGATTATGA GTCCAAAAAGGGTCACATTGGGTTGGATTATTATGGAAGAACAGTGAATATTAAGATTCAACCAGCTGGGATTCATATGG GTTTGCTGGAATCGGTTTTGTCGTTGCCGGAAACTGCTTCCAGGGTGAAGGAGTTGAGGGAGCAGTATAAGGGGAAAATC GTGATCTTAGGAGTTGATGATATGGATTTGTTCAAGGGTATTAGCTTGAAGTTCTTGGCACTTGGGCAGCTACTGGACCA GCGTGAGCATTTGAGGGGTCGTGTGGTGCTGGTTCAGATTCTGAATCCTGCAAGAAGCAGAGGGAAGGACATTCAGGATG TGAAGAGTGAGAGTGAGGCTATTGCAAGTGAGATTAACCAGAGGTATGGCAGAAAGGGGTACCTGCCAATTGTTTGTATC AACGGCCCAGTTTCCACTCAGGAGAAGGTGGCTTACTATGCTGTGTCTGAGTGCTGTGTTGTGAGTGCTGTGAGGGATGG GATGAATTTGATGCCTTATGAGTACACTGTGTGCAGGCAGGGGAGTGTTGCCTTGGATAAGGCACTTGGGGTTGAAGGAG ATGAGAATGGGAAGGTGAAACCCAAGCAGAGTGTTATTATTGTGTCTGAGTTCATTGGGTGTTCCCCTTCTCTCAGTGGA GCCATTCGGGTGAATCCGTGGAACATTGATGATCTTACTGAGGCCATGAACTCGGCCATCACAATGTCGGAGGCAGAGAA GCATTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCTCATGATGTAGCCTATTGGGCGAGGAGTTTTGATCAGGATT TAGGCAGGGCTTGTAGGAAGCATCACCGTAAGAGGTGTTGGGGTTTTGGGCTGGGATTGGGATTTAGAGTTGTTGCTTTG GATCCTACCTTCAGGAAGCTCTTTGTTGATAACATTGTCTCTGACTACAGAGATACACAGAGTAGGTTGATCCTTTTGGA CTATGATGGCACTATGATGCCCCAGGCCTCTATTGACAAAACTCCAAGCACTGAGGTCATTTCTGTCTTGAATAGTCTAT GCAGTGATCCCAGAAATATTGTGTTTATAGTCAGCGGCAGAGATAAGGATCGCCTCAGCGAGTGGTTTTCTCCGTGTGAG AAGCTGGGTCTCTCTGCTGAGCATGGTTACTTCACCAGGTGGAGTAAGGACTCTCCTTGGCAGACCCAGGGATCAACAAC AGAATTTGATTGGAAAATGGTTGTGGAGCCGGTGATGGCGCTTTATACAGAAGCAACGGATGGTTCTTTCATCGAACAAA AGGAAAGCGCAATTGTTTGGCACCATCAGGAAGCAGATCCTCATTTTGGGTCATGCCAGGCAAAAGAGCTACTTGATCAC CTGGAGAATGTGCTGGCTAATGAGCCAGTGGTGGTTAAAAGGGGACAACATATAGTTGAAGTTAAACCTCAGGGTGTGAG CAAAGGTATGGTAGTTGAAGAGCTTATCTCAACCATGAGGAGTGAGGGGAAATCACCAGATTTTCTTCTGTGCATTGGAG ATGATCGCTCAGATGAAGACATGTTTGAGAGCATTGCTAGTTCAGTTTCTAACCCAGCTCTGCCAACCATATCCAAAGTG TTTGCTTGCACTGTTGGCCAGAAACCAAGCATGGCTAAATACTATTTGGAAGATACTAGCGAGGTTATCAATTTGCTCGA AGGACTCGCGACTGCATCAGCCCCAGCTACGCTGCCCATAGCTTCTCAGGAATTGCAAGGAGGAACATTGTAG
Protein sequence (LotjaGi4g1v0295200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSRSCVGLLNLISADDYNRVPGVMAPEINNFGSDGGVSPASRERRIIVANQLPIRASRDGENEHWRFEFDRDSLVLQAK DGFPSEVEVLYVGSLKAEVEPKEQDEVAQVLLEKFHCVPTFLPSEVHNLFYHGFCKHYLWPLFHYMLPMSPSQGARFDRA QWQAYVHANKIFADKVTEVINPDEDFVWVHDYHLMILPTLLRKRFHHVKLGFFLHNTFPTSEIYRTIPVREEILRAFLNC DLIGFHTFDYARHFLSCCSRMLGLDYESKKGHIGLDYYGRTVNIKIQPAGIHMGLLESVLSLPETASRVKELREQYKGKI VILGVDDMDLFKGISLKFLALGQLLDQREHLRGRVVLVQILNPARSRGKDIQDVKSESEAIASEINQRYGRKGYLPIVCI NGPVSTQEKVAYYAVSECCVVSAVRDGMNLMPYEYTVCRQGSVALDKALGVEGDENGKVKPKQSVIIVSEFIGCSPSLSG AIRVNPWNIDDLTEAMNSAITMSEAEKHLRHEKHYKYISSHDVAYWARSFDQDLGRACRKHHRKRCWGFGLGLGFRVVAL DPTFRKLFVDNIVSDYRDTQSRLILLDYDGTMMPQASIDKTPSTEVISVLNSLCSDPRNIVFIVSGRDKDRLSEWFSPCE KLGLSAEHGYFTRWSKDSPWQTQGSTTEFDWKMVVEPVMALYTEATDGSFIEQKESAIVWHHQEADPHFGSCQAKELLDH LENVLANEPVVVKRGQHIVEVKPQGVSKGMVVEELISTMRSEGKSPDFLLCIGDDRSDEDMFESIASSVSNPALPTISKV FACTVGQKPSMAKYYLEDTSEVINLLEGLATASAPATLPIASQELQGGTL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 835 | 835 | 0.0 | – | |
| PANTHER | 1 | 835 | 835 | 0.0 | – | |
| Gene3D | 38 | 299 | 262 | 3.7E-77 | – | |
| SUPERFAMILY | 45 | 539 | 495 | 4.19E-143 | – | |
| Pfam | 45 | 534 | 490 | 7.4E-177 | ||
| CDD | 45 | 534 | 490 | 0.0 | – | |
| Gene3D | 300 | 520 | 221 | 4.1E-73 | – | |
| TIGRFAM | 581 | 830 | 250 | 9.4E-37 | ||
| Gene3D | 581 | 687 | 107 | 1.9E-12 | ||
| SUPERFAMILY | 582 | 830 | 249 | 1.55E-46 | ||
| CDD | 583 | 824 | 242 | 1.07664E-68 | – | |
| TIGRFAM | 583 | 785 | 203 | 2.3E-21 | ||
| Pfam | 585 | 819 | 235 | 5.1E-80 | ||
| Gene3D | 711 | 837 | 127 | 2.1E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi4g1v0295200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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